FFCP PHASE1:Hg19::chr6:132834443..132834454,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8417 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11442 | |||
|TSSclassifier=strong | |||
|UniProt=O15400 | |||
|association_with_transcript=-106bp_to_ENST00000367937,NM_003569,uc003qdg.2,uc011ecg.1,uc011ech.1_5end | |||
|cluster_id=chr6:132834443..132834454,- | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_6_at_STX7_5end | |||
|id=chr6:132834443..132834454,- | |||
|ontology_enrichment_celltype=CL:0000148!6.30e-17!10;CL:0000541!6.30e-17!10;CL:0000710!8.50e-14!20;CL:0000147!1.33e-11!14;CL:0000325!2.67e-10!39;CL:0002334!5.40e-10!12;CL:0000075!1.53e-09!27;CL:0002567!1.96e-09!3;CL:0002579!7.72e-09!3;CL:0002580!2.42e-08!3;CL:0002077!2.35e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.11e-78;10!CL:0002567;1.23e-66;3!CL:0000147;2.59e-56;14!CL:0000710;1.63e-39;20!CL:0000075;2.48e-29;27!CL:0002616;1.87e-23;1!CL:0002566;4.10e-23;1!CL:0002581;4.10e-23;1!CL:0002077;8.68e-20;34!CL:0002615;1.30e-08;3!CL:0000136;9.68e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.18e-78,10;CL:0000541,1.18e-78,10;CL:0002567,7.85e-67,3;CL:0000147,2.72e-56,14;CL:0000710,1.69e-39,20;CL:0000075,2.54e-29,27;CL:0002616,1.67e-23,1;CL:0002077,2.54e-23,34;CL:0002581,3.28e-23,1;CL:0002566,4.10e-23,1;CL:0000333,1.81e-18,41;CL:0000133,4.89e-13,59;CL:0000221,9.53e-11,72;CL:0002615,1.40e-08,3;CL:0000136,8.09e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000133;3.20e-08;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!2.38e-11!6;UBERON:0002358!2.38e-11!6;UBERON:0003684!2.38e-11!6;UBERON:0001178!2.38e-11!6;UBERON:0004457!2.33e-07!12;UBERON:0000042!2.33e-07!12;UBERON:0005406!8.62e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;1.09e-44;2!UBERON:0001013;2.99e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,7.83e-45,2;UBERON:0001013,2.85e-07,14 | |||
|phase1_expression=0.54503513781167,0,0.422863212287913,0,1.34088328328186,2.61701557230111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39695367442772,1.90994212779139,7.03304683260282,3.4214489204541,1.02827492703324,0.901029173531752,2.00078502841405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.896974044789907,0.511707249066704,0.321707842287215,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.79832133146375,0,0,0.0679697329768317,0.0657727735628491,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.874238242015829,0,0,0,0,0.297046400327086,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0.435433495793923,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@STX7 | |||
}} |
Latest revision as of 19:46, 24 September 2015
Short description: | p6@STX7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_STX7_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -106bp_to_ENST00000367937, NM_003569, uc003qdg.2, uc011ecg.1, uc011ech.1_5end |
EntrezGene: | STX7 |
HGNC: | 11442 |
UniProt: | O15400 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.18e-78 | 10 |
melanoblast | 1.18e-78 | 10 |
light melanocyte | 7.85e-67 | 3 |
pigment cell | 2.72e-56 | 14 |
neurecto-epithelial cell | 1.69e-39 | 20 |
columnar/cuboidal epithelial cell | 2.54e-29 | 27 |
perirenal adipocyte cell | 1.67e-23 | 1 |
ecto-epithelial cell | 2.54e-23 | 34 |
perirenal preadipocyte | 3.28e-23 | 1 |
dark melanocyte | 4.10e-23 | 1 |
migratory neural crest cell | 1.81e-18 | 41 |
neurectodermal cell | 4.89e-13 | 59 |
ectodermal cell | 9.53e-11 | 72 |
adipocyte of omentum tissue | 1.40e-08 | 3 |
fat cell | 8.09e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 7.83e-45 | 2 |
adipose tissue | 2.85e-07 | 14 |