FFCP PHASE1:Mm9::chr19:53751885..53751915,+: Difference between revisions
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{{FFCP|EntrezGene=73713|HGNC=|MCL_coexpression_id=19|UniProt=E9Q080,E9QPB0,E9PVK0,Q3UQS8|association_with_transcript=89bp_to_ENSMUST00000050565,ENSMUST00000095969,ENSMUST00000164202,NM_001170847,uc008hwz.2_5end|description=CAGE_peak_1_at_Rbm20_5end|id=chr19:53751885..53751915,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!5.53e-12!18;UBERON:0000948!5.53e-12!18;UBERON:0005498!5.53e-12!18;UBERON:0004140!5.53e-12!18;UBERON:0009881!5.53e-12!18;UBERON:0004141!5.53e-12!18;UBERON:0003084!5.53e-12!18;UBERON:0007005!5.53e-12!18;UBERON:0004139!5.53e-12!18;UBERON:0004291!5.53e-12!18;UBERON:0003103!1.50e-09!43;UBERON:0004535!1.58e-07!23;UBERON:0001009!1.58e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.91e-17,18;UBERON:0000948,3.91e-17,18;UBERON:0005498,3.91e-17,18;UBERON:0004140,3.91e-17,18;UBERON:0009881,3.91e-17,18;UBERON:0004141,3.91e-17,18;UBERON:0003084,3.91e-17,18;UBERON:0007005,3.91e-17,18;UBERON:0004139,3.91e-17,18;UBERON:0004291,3.91e-17,18;UBERON:0004535,3.84e-12,23;UBERON:0001009,3.84e-12,23;UBERON:0003103,1.45e-10,43;UBERON:0004872,8.95e-09,33|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.439372365468944,0.972149495371417,0.139986421625363,1.43752564364972,0,0,0,0,0.286533439938757,2.06268836910977,0,0,0,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0,0,0.571301968807607,1.10434270475807,0,0.383381884072945,0,1.10115880999389,0.255374676170375,0.153606533256243,0,0.182975287204819,0,0,0,0.15279824777681,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,2.11265129665021,0,0,0,0,0,0,0.22836775943812,0,0,0,0.304465478312141,0.230615497256059,0,0,0,0.494389935468748,0,6.19227386364912,3.88240439873782,8.17113618303456,3.87900202508178,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0.251308704225729,0.173824320192276,0,0,0.324482526135515,0.305518091550949,2.48813941220186,0.505445516867349,0,0.130120442962704,0,0.720248519221397,0,0.544291993210623,0.2562274405697,0.374806898238915,0.776110112217047,1.72454394346274,2.26927296201383,0.879755620819744,0.657587197282725,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,27.1334762021507,23.9216581180718,22.5077576826269,39.7731155783153,45.6493017653977,37.3326413187455,55.1105449058467,56.8739610967193,81.6189743146515,60.8871444679878,71.0845119462482,92.2563052631838,81.1409930210594,65.206384241442,74.2161495744856,0.210289948564127,0.205809224758569,0.330418782983798,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,1.5994791765362,2.25415471346161,2.24016460629846,1.35766741017338,1.33258057791605,0.126473074248515,0,0.156998727841375,0,0,0.83422552858047,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,1.66277871149944,1.70542270593436,1.30371981153621,1.35796068620151,0,1.50755631697634,1.42826184531608,1.95133647857799,1.10344600874334,1.10732344824387,1.43509291791738,0.983179888294428,1.03610989119537,0.723245292907558,0,0,0,0,0.321101179975584,0.468846746368813,0,30.2965112645248,2.52406575533005,3.12350995437311,3.01592756825919,0,0.222798674082394,0,0.809621403349789,0.292255857911312,1.97643888973262,0.642642632843614,0,0.35613120733451,0,0,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,0,0.680879211507576,0.540183282093931,0,0,0,0,0,0,0.23467170806371,1.27099242518292,0,0.32977250588296,0.484393280087717,0.422190474497091,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03242008761012,0,0,0.102710957164827,0.51968329191118,0,0.596044064343795,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,2.26730383615211,23.5305110576509,39.3843830515598,23.503846290971,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0.62272408550506,1.19707462020309,0.853668028770671,0.729320151204882,1.25767897576789,1.10306105070008,1.33348036680969,2.06035057238894,2.88827288632634,2.27427490587418,1.77435509923168,1.69763707247469,0.749132059759059,1.79270426733634,2.1825478203133,1.90517476513229,1.0429589335037,1.92909220463705,1.23625770240992,1.61918812147837,1.02860775715625,1.06485483695602,0.476872379894642,2.47088908274958,1.12931256498397,1.52306294205018,1.46342378298218,2.10455769150274,1.35804113845862,2.80571135828869,1.06771516311757,1.28055827088233,0.409231043169689,1.23949472948773,2.50778594275484,0.749431733813838,2.33931608445408,2.79332370262788,3.63447830930802,1.98532277207564,4.86922454802885|short_description=p1@Rbm20}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=73713 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q080,E9QPB0,E9PVK0,Q3UQS8 | |||
|association_with_transcript=89bp_to_ENSMUST00000050565,ENSMUST00000095969,ENSMUST00000164202,NM_001170847,uc008hwz.2_5end | |||
|cluster_id=chr19:53751885..53751915,+ | |||
|description=CAGE_peak_1_at_Rbm20_5end | |||
|id=chr19:53751885..53751915,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!5.53e-12!18;UBERON:0000948!5.53e-12!18;UBERON:0005498!5.53e-12!18;UBERON:0004140!5.53e-12!18;UBERON:0009881!5.53e-12!18;UBERON:0004141!5.53e-12!18;UBERON:0003084!5.53e-12!18;UBERON:0007005!5.53e-12!18;UBERON:0004139!5.53e-12!18;UBERON:0004291!5.53e-12!18;UBERON:0003103!1.50e-09!43;UBERON:0004535!1.58e-07!23;UBERON:0001009!1.58e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.91e-17,18;UBERON:0000948,3.91e-17,18;UBERON:0005498,3.91e-17,18;UBERON:0004140,3.91e-17,18;UBERON:0009881,3.91e-17,18;UBERON:0004141,3.91e-17,18;UBERON:0003084,3.91e-17,18;UBERON:0007005,3.91e-17,18;UBERON:0004139,3.91e-17,18;UBERON:0004291,3.91e-17,18;UBERON:0004535,3.84e-12,23;UBERON:0001009,3.84e-12,23;UBERON:0003103,1.45e-10,43;UBERON:0004872,8.95e-09,33 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.439372365468944,0.972149495371417,0.139986421625363,1.43752564364972,0,0,0,0,0.286533439938757,2.06268836910977,0,0,0,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0,0,0.571301968807607,1.10434270475807,0,0.383381884072945,0,1.10115880999389,0.255374676170375,0.153606533256243,0,0.182975287204819,0,0,0,0.15279824777681,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,2.11265129665021,0,0,0,0,0,0,0.22836775943812,0,0,0,0.304465478312141,0.230615497256059,0,0,0,0.494389935468748,0,6.19227386364912,3.88240439873782,8.17113618303456,3.87900202508178,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0.251308704225729,0.173824320192276,0,0,0.324482526135515,0.305518091550949,2.48813941220186,0.505445516867349,0,0.130120442962704,0,0.720248519221397,0,0.544291993210623,0.2562274405697,0.374806898238915,0.776110112217047,1.72454394346274,2.26927296201383,0.879755620819744,0.657587197282725,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,27.1334762021507,23.9216581180718,22.5077576826269,39.7731155783153,45.6493017653977,37.3326413187455,55.1105449058467,56.8739610967193,81.6189743146515,60.8871444679878,71.0845119462482,92.2563052631838,81.1409930210594,65.206384241442,74.2161495744856,0.210289948564127,0.205809224758569,0.330418782983798,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,1.5994791765362,2.25415471346161,2.24016460629846,1.35766741017338,1.33258057791605,0.126473074248515,0,0.156998727841375,0,0,0.83422552858047,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,1.66277871149944,1.70542270593436,1.30371981153621,1.35796068620151,0,1.50755631697634,1.42826184531608,1.95133647857799,1.10344600874334,1.10732344824387,1.43509291791738,0.983179888294428,1.03610989119537,0.723245292907558,0,0,0,0,0.321101179975584,0.468846746368813,0,30.2965112645248,2.52406575533005,3.12350995437311,3.01592756825919,0,0.222798674082394,0,0.809621403349789,0.292255857911312,1.97643888973262,0.642642632843614,0,0.35613120733451,0,0,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,0,0.680879211507576,0.540183282093931,0,0,0,0,0,0,0.23467170806371,1.27099242518292,0,0.32977250588296,0.484393280087717,0.422190474497091,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03242008761012,0,0,0.102710957164827,0.51968329191118,0,0.596044064343795,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,2.26730383615211,23.5305110576509,39.3843830515598,23.503846290971,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0.62272408550506,1.19707462020309,0.853668028770671,0.729320151204882,1.25767897576789,1.10306105070008,1.33348036680969,2.06035057238894,2.88827288632634,2.27427490587418,1.77435509923168,1.69763707247469,0.749132059759059,1.79270426733634,2.1825478203133,1.90517476513229,1.0429589335037,1.92909220463705,1.23625770240992,1.61918812147837,1.02860775715625,1.06485483695602,0.476872379894642,2.47088908274958,1.12931256498397,1.52306294205018,1.46342378298218,2.10455769150274,1.35804113845862,2.80571135828869,1.06771516311757,1.28055827088233,0.409231043169689,1.23949472948773,2.50778594275484,0.749431733813838,2.33931608445408,2.79332370262788,3.63447830930802,1.98532277207564,4.86922454802885 | |||
|short_description=p1@Rbm20 | |||
}} |
Latest revision as of 23:14, 25 September 2015
Short description: | p1@Rbm20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rbm20_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 89bp_to_ENSMUST00000050565, ENSMUST00000095969, ENSMUST00000164202, NM_001170847, uc008hwz.2_5end |
EntrezGene: | Rbm20 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.91e-17 | 18 |
heart | 3.91e-17 | 18 |
primitive heart tube | 3.91e-17 | 18 |
primary heart field | 3.91e-17 | 18 |
anterior lateral plate mesoderm | 3.91e-17 | 18 |
heart tube | 3.91e-17 | 18 |
heart primordium | 3.91e-17 | 18 |
cardiac mesoderm | 3.91e-17 | 18 |
cardiogenic plate | 3.91e-17 | 18 |
heart rudiment | 3.91e-17 | 18 |
cardiovascular system | 3.84e-12 | 23 |
circulatory system | 3.84e-12 | 23 |
compound organ | 1.45e-10 | 43 |
splanchnic layer of lateral plate mesoderm | 8.95e-09 | 33 |