FFCP PHASE1:Hg19::chr6:148514573..148514593,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:148514573..148514593,+ | |||
|coexpression_cluster_id=C2847 | |||
|description=CAGE_peak_at_chr6:148514573..148514593,+ | |||
|id=chr6:148514573..148514593,+ | |||
|ontology_enrichment_celltype=CL:0002536!2.72e-09!2;CL:0002593!5.62e-09!2;CL:0002537!1.29e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002623;6.20e-20;3!CL:0000622;2.31e-12;5!CL:0000154;1.85e-10;6!CL:0000138;2.40e-10;6!CL:0002536;2.31e-08;2!CL:0002593;2.31e-08;2!CL:0000150;2.90e-07;9!CL:0000153;3.44e-07;9!CL:0000447;3.44e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,5.37e-20,3;CL:0000622,2.12e-12,5;CL:0000154,1.73e-10,6;CL:0000058,3.19e-10,6;CL:0000138,3.19e-10,6;CL:0002536,2.48e-08,2;CL:0002593,2.87e-08,2;CL:0000150,2.77e-07,9;CL:0000153,4.15e-07,9;CL:0000447,4.15e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0009143;7.45e-16;1!UBERON:0008814;2.31e-08;2!UBERON:0010056;2.31e-08;2 | |||
|ontology_enrichment_disease=DOID:1749!4.11e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:6193;6.44e-16;1!DOID:3350;1.29e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,6.44e-16,1;DOID:3350,1.29e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!4.68e-17!14;UBERON:0000158!4.68e-17!14;UBERON:0000305!3.53e-14!7;UBERON:0004871!2.28e-12!8;UBERON:0000166!3.98e-11!21;UBERON:0000478!2.18e-09!24;UBERON:0002456!5.62e-09!2;UBERON:0004923!9.56e-09!57;UBERON:0000165!5.23e-08!28;UBERON:0000930!5.23e-08!28;UBERON:0005795!5.43e-08!22;UBERON:0000078!9.04e-08!18;UBERON:0000161!1.16e-07!35;UBERON:0001044!8.62e-07!6;UBERON:0003293!8.62e-07!6;UBERON:0003294!8.62e-07!6;UBERON:0010047!8.62e-07!6;UBERON:0000167!8.62e-07!6;UBERON:0000002!9.69e-07!6;UBERON:0001560!9.69e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.06e-15;1!UBERON:0001961;2.06e-15;1!UBERON:0001744;2.06e-15;1!UBERON:0001042;2.06e-15;1!UBERON:0001735;2.06e-15;1!UBERON:0000002;1.57e-10;6!UBERON:0001560;1.57e-10;6!UBERON:0001044;1.85e-10;6!UBERON:0003293;1.85e-10;6!UBERON:0003294;1.85e-10;6!UBERON:0010047;1.85e-10;6!UBERON:0003408;1.85e-10;6!UBERON:0000167;1.85e-10;6!UBERON:0001041;8.06e-10;14!UBERON:0000341;1.55e-08;2!UBERON:0000165;2.26e-08;28!UBERON:0006562;2.31e-08;2!UBERON:0002456;2.31e-08;2!UBERON:0000161;2.62e-07;19!UBERON:0000166;2.62e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,2.06e-15,1;UBERON:0001961,2.06e-15,1;UBERON:0001744,2.06e-15,1;UBERON:0001735,2.06e-15,1;UBERON:0000166,1.20e-10,22;UBERON:0000002,1.50e-10,6;UBERON:0001560,1.50e-10,6;UBERON:0001044,1.73e-10,6;UBERON:0003293,1.73e-10,6;UBERON:0003294,1.73e-10,6;UBERON:0010047,1.73e-10,6;UBERON:0000167,1.73e-10,6;UBERON:0000341,1.50e-08,2;UBERON:0002456,2.87e-08,2;UBERON:0000165,3.90e-08,29;UBERON:0000930,3.90e-08,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.09220686065086,0.527533956456907,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,1.00267582127178,0,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.447792613514241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,7.38945844676597,1.38510465306835,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.261177619741208,0,4.81560890920526,0,0,0,3.78257164304836,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0.14405479798815,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53646629384555,2.07377898544228,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13233981900981,0,0,0,0,0,0,1.74173398317569,0.684466602170562,1.21233695426258,0.502055437748735,0,0.0814032686109745,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p@chr6:148514573..148514593,+ | |||
}} |
Latest revision as of 20:41, 30 July 2015
Short description: | p@chr6:148514573..148514593, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:148514573..148514593, + |
Coexpression cluster: | C2847_epithelioid_cervical_esophagus_tongue_Placental_salivary_acantholytic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 5.37e-20 | 3 |
acinar cell | 2.12e-12 | 5 |
protein secreting cell | 1.73e-10 | 6 |
chondroblast | 3.19e-10 | 6 |
chondrocyte | 3.19e-10 | 6 |
amniotic epithelial cell | 2.48e-08 | 2 |
smooth muscle cell of the internal thoracic artery | 2.87e-08 | 2 |
glandular epithelial cell | 2.77e-07 | 9 |
GAG secreting cell | 4.15e-07 | 9 |
carbohydrate secreting cell | 4.15e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
tonsil | 2.06e-15 | 1 |
mucosa-associated lymphoid tissue | 2.06e-15 | 1 |
lymphoid tissue | 2.06e-15 | 1 |
tonsillar ring | 2.06e-15 | 1 |
oral opening | 1.20e-10 | 22 |
uterine cervix | 1.50e-10 | 6 |
neck of organ | 1.50e-10 | 6 |
saliva-secreting gland | 1.73e-10 | 6 |
gland of oral region | 1.73e-10 | 6 |
gland of foregut | 1.73e-10 | 6 |
oral gland | 1.73e-10 | 6 |
oral cavity | 1.73e-10 | 6 |
throat | 1.50e-08 | 2 |
internal thoracic artery | 2.87e-08 | 2 |
mouth | 3.90e-08 | 29 |
stomodeum | 3.90e-08 | 29 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 6.44e-16 | 1 |
mesenchymal cell neoplasm | 1.29e-08 | 2 |