FFCP PHASE1:Hg19::chr6:27775943..27775958,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8329,8357 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4725,4775 | |||
|TSSclassifier=strong | |||
|UniProt=A4FTV9,P0C0S8 | |||
|association_with_transcript=-18bp_to_NM_003509,uc003njm.2_5end | |||
|cluster_id=chr6:27775943..27775958,+ | |||
|coexpression_cluster_id=C241 | |||
|description=CAGE_peak_2_at_HIST1H2AI_5end,CAGE_peak_2_at_HIST1H3H_5end | |||
|id=chr6:27775943..27775958,+ | |||
|ontology_enrichment_celltype=CL:0000012!1.57e-17!682;CL:0000548!1.01e-16!679;CL:0000004!1.01e-16!679;CL:0000255!1.01e-16!679;CL:0000003!1.96e-13!722;CL:0000066!1.04e-12!254;CL:0002321!5.31e-11!248;CL:0000220!1.14e-10!246;CL:0000144!2.90e-10!625;CL:0002371!5.29e-08!591;CL:0000063!1.19e-07!578 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.68e-13,253;CL:0002321,6.68e-11,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.22e-22!51;DOID:0060083!2.22e-22!51;DOID:162!9.39e-22!235;DOID:14566!1.89e-20!239;DOID:1240!5.48e-18!39;DOID:8692!7.74e-14!31;DOID:0050686!1.50e-13!137;DOID:0050687!5.53e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.11e-14;39!DOID:2531;1.02e-13;51!DOID:0060083;1.02e-13;51!DOID:8692;2.23e-13;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.22e-22,51;DOID:0060083,2.22e-22,51;DOID:162,9.18e-22,235;DOID:14566,1.85e-20,239;DOID:1240,5.48e-18,39;DOID:8692,7.74e-14,31;DOID:0050686,1.50e-13,137;DOID:0050687,5.45e-07,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=14.7159487209151,41.9637026826327,2.53717927372748,30.0219895059391,0.893922188854576,10.4680622892044,283.695863548508,25.2687949370732,16.4546945765898,788.805936169843,5524.49184683771,1230.91713195352,446.293727162543,36.0160087113736,65.2852830183994,101.521097114218,80.7610667552129,122.692095185079,88.8037693798723,1204.98579539752,1914.9544887098,760.754609027319,1096.57006669908,1349.71870564371,1062.09073097203,2701.97802724756,3209.55834336673,3387.16105227156,84.1799552456655,39.1505986059157,43.6581467751334,2692.98476649878,3617.18187860801,1753.37351621091,1971.23038596636,1984.82465475689,2219.61932137145,15.5118714388926,20.4555336419545,28.4284240637766,23.0632938467122,27.2070679455943,21.8939232489059,21.373541100596,28.7185717203495,9.46077838632483,16.2700325833979,25.903576945375,17.6532631410209,16.3984663623626,15.369642391746,11.1146648047635,12.4108445065183,15.4916324060118,17.6054432572644,14.8711448238658,19.9221489542227,13.7081325511502,13.7737751566906,8.98601275813062,7.67204550958849,25.7284014145639,18.1511928435685,10.2293940127847,10.7377418292576,13.6172453925874,14.9477339758938,19.0948985595125,17.7304192262868,11.0766310799609,35.7185706553688,24.3063239751793,23.7346790580663,15.4216359007718,10.2050063983221,16.5630329951617,18.8712100326112,11.263266963113,9.32208402843065,86.3588613535983,35.8050018958362,46.2140309024524,642.386292283828,341.336632038832,381.599469907465,276.09445400053,161.359582775513,405.200470167911,391.999609561423,428.370135786378,86.5203713046362,110.400591601736,93.2746676625558,730.907447042013,191.133419976704,1940.08716845322,40.1287931032219,125.370433316984,78.1285696198135,438.195804418967,142.428030518879,133.98572902293,171.447520998962,1488.66652489969,265.734528542303,179.8855224019,133.777108699918,1578.34124165977,1461.34682918279,2289.79782160619,2633.89201951692,1597.39460857161,71.9189831335993,49.2275123685072,86.7644847581307,2733.36127389339,182.412954954515,140.887252647878,82.2313999063384,188.909290694189,174.49036563352,233.8112029343,55.5622189396982,38.6519565686344,149.916871862815,125.255166331285,166.688983374972,44.5550902526659,97.8831116567637,58.5090591686508,12.1903433156981,409.127524419218,232.709862555225,541.074411119696,98.7635683952702,90.0945347936323,349.925816702484,59.8560890472242,680.272544312632,250.554219132697,249.450791368478,21.3495893061272,998.897680498151,1915.84321586715,102.232429001225,98.9056907859838,99.4525544681111,72.7396404131293,77.2193129553173,124.809720446734,1515.76211857849,601.303981979181,451.282652089873,384.409400508327,453.898389979118,1024.81470622675,883.003733618025,60.469521645623,51.586108089573,56.2330629444646,335.959650469029,851.504758404734,427.352662766845,475.388362887208,339.449476162457,404.081270485461,551.668668542499,573.86810454301,3915.70692087866,1991.55935377393,1410.83663000807,6.58902087180316,7.75560528296651,582.621653662426,35.2850085703676,279.980061290386,6.09082231740807,111.005772229791,500.79175566408,468.165796118826,684.261062627409,373.701335851997,95.852998903128,347.418823267725,628.674479374362,142.73005426917,63.3793516927999,1934.55774121982,177.306923639622,925.305294545097,162.450715759808,2670.81280265514,1566.93010148351,1266.72582564758,137.599911425798,1257.45490632057,79.4575257241636,64.1521542932309,87.2852260353306,336.75970391707,759.579375899764,1557.44572630302,1236.92168745424,277.341179599667,385.861328754257,245.803212230814,107.570450177123,887.606833227165,185.668272937972,41.4301334308021,89.4352622893351,373.613414625081,187.658655743197,51.5281080091258,62.7213805837458,194.59911107418,258.890122713305,182.762052552739,58.2675858405755,64.8200687843436,110.407983272667,287.949496734596,395.754422452678,97.4034699943016,134.736583571872,113.001010583268,767.824480085803,824.202629191317,968.360319874566,763.463670188203,1428.89297850868,2230.01166395332,876.117381046969,228.350533058474,2975.42620593243,8.35862270457562,14.4375896333917,1250.38456962111,1173.85519701382,1230.36130755518,1115.4029462427,1050.83255885767,1196.31846155815,612.943126896107,553.540753118601,577.120735419586,838.5445964536,1064.43506316815,205.7870056657,326.359339275903,6.33775174109154,20.6393715502301,32.4934448674772,6531.00509274034,362.077963070926,257.351715447788,87.9099786123091,2197.45427618646,1231.37938307007,191.380316142681,343.727762102393,1365.43437307209,857.328171630123,262.466436863574,49.7812863559884,407.979581372795,856.52319826673,527.95527245101,3171.09024901057,2934.30570204027,68.9407617044713,82.8375098592901,302.761677582139,197.778389712099,84.4950104840264,283.550194484773,985.233308254034,1113.7092523855,1571.86898457737,73.8994856843915,312.924134483005,50.5880601919484,35.0211486803216,43.0486697983956,598.277160020817,461.442018074399,1432.39720490677,1212.90364230098,433.829191715322,714.816477668524,101.754210016486,726.160902220556,578.083051272929,1002.75438202985,9.04902010304444,522.178410943748,2033.79842264974,26.8597497750719,197.614130131596,1778.33178564845,2441.22356212062,2548.59456446801,131.253798178179,49.9211876960128,824.06357711755,986.003429857136,126.519533752346,1934.73842557637,6.63166629531089,5.22920075160176,35.5903848608123,143.516061156605,207.432178761468,149.692097032952,129.637046820946,44.7961549753044,462.143572331928,132.040551680832,235.475865642739,400.022191877927,2309.9627325626,54.18345905553,101.129332609114,69.4335826273439,259.684705955358,92.3992962389114,898.561600447682,314.428030032573,1709.67585443048,2.99602809578873,17.9496875522415,13.2612964299531,34.8443836482357,149.050815275784,145.398052703058,85.0600823661001,145.954912836078,70.9660867652706,156.383789015272,23.1728496790344,20.4666753650386,226.606026130586,381.929719157876,454.65436962384,255.698477379568,162.906563009,211.719492491298,45.4889657470352,60.6156904300313,45.2524845086604,1208.26649978479,2150.34587847562,2708.20746706062,6.4508030032882,31.6131664973409,53.6060780367171,3.71603532841533,56.2877973973374,7.07757253031873,22.2627099667486,828.568684801668,403.065116460798,334.668160756272,410.210999055061,824.280214416491,448.267698535327,66.3676416703873,65.3775021444864,890.156416620196,1026.08373171785,35.0102187941662,364.118087616281,234.28065547163,2210.29764954038,2855.56044972471,588.872537593354,1685.52875193069,1038.25197700785,974.644445285057,1930.92520368242,746.999328308402,911.068629320414,487.068557789068,675.664795259053,1097.65792240284,7617.30737455641,10139.2510970987,525.466306363481,304.069576563627,278.198527437979,20.7112433411922,1034.64338298246,759.664965768854,333.07401203778,264.574520136864,220.136983886499,249.023770320506,1013.33180338013,1072.06966428729,903.794405781067,416.89797033377,383.859188790963,876.981996111678,191.685972747426,59.6678544453131,123.770403383128,62.7854545473354,60.5935107324744,159.442023408969,21.0924272376529,867.811401349947,154.632857248397,289.042174462143,934.308033488628,90.6235431418169,132.96301978331,205.431419886536,182.234548637986,48.4200692566515,526.381756727414,11.9822916649498,715.957307833358,1088.72376395633,206.853326220812,323.953695088545,372.994065826443,278.405277126456,133.148669785327,199.676508257277,1205.43060302947,23.6402084942346,624.392367332425,301.664804211649,142.395269977389,494.975550796663,1088.9465535036,218.934861829602,30.6915619677634,122.700413264538,85.9222125181089,442.953352909583,858.520913234407,1360.30806462819,425.644893341625,77.813240482392,414.808432872694,1100.46882074699,28.7106384004823,54.0043624454239,3750.71284950033,4964.87381083582,662.200579776974,4625.75600347247,6501.88070606957,22.2179369833199,151.968396552944,210.589344584532,263.397511200785,30.7829356277326,95.4001505356478,77.2283579213799,78.6113118300344,47.6463550915578,62.5270655091015,86.2469503886314,81.0047155857172,105.485648447138,149.66052364959,172.283894092141,1369.03968668602,2346.69410183783,4205.01475062444,2756.10615316091,2061.38170638367,2831.0333837745,3261.14494798407,619.991923798253,723.906926812259,1016.20498759261,2215.24579469616,1502.40352056752,1085.24728579999,1947.02473649624,1673.00656643034,1174.4742958519,2072.59363883882,1590.42974621919,1470.45429798028,1095.56557645705,1271.22361070303,2942.15394056392,2225.02214177078,1061.01337892928,1420.16276767739,1921.15911141143,754.280477219995,1243.73603155303,21.3901941736965,1346.3736282891,620.182433504167,865.762839319141,26.2618933211459,772.999064207358,11.6721066797708,2.98244294329889,2.11004124615769,57.3239830867965,2215.2936773561,1082.43996747222,20.9210387663623,496.758480125004,662.079261361037,221.718503664672,677.82802367411,31.1039587661807,416.719544270155,99.3567519449631,2071.3565270486,9.56841034678256,330.486667438777,821.302357168867,2.90799823828566,6.21546257684403,249.517247501493,378.401536856844,601.462419973838,42.7749749506528,371.308021755585,711.910220819746,1582.61552943633,291.997637135521,2.62444152044929,0,2.65722415744152,2.29133233388275,4.5774520895125,1.43753037910592,13.0040952339561,5.04586413454137,311.237190273755,348.280513207951,28.0098940953821,120.094926862739,3.22789466143284,381.739261674761,490.434236855944,27.753100896677,187.500273693612,18.6562171606522,5266.0206560263,2311.53427541674,1357.78322944238,1424.6365967975,1708.88104911342,1422.45577120724,1704.9372885268,1075.84170311818,1099.08891812649,573.110389446768,837.799654388967,619.304286941865,576.256658094454,74.2158966183016,409.390197105529,3425.11555738986,2057.09245558138,1771.83163920857,3.43745778201453,77.0474541406837,1.63985112007737,4834.32209505829,415.200321373894,268.272319385173,13.8104540997287,373.861312590371,229.860643984498,124.09844239035,412.637786292782,831.371918623127,228.640932211272,104.593458056658,144.723075385731,224.608167973163,92.7827120057124,259.044289188543,350.7642311753,354.046531858146,618.55566275376,24.8111868903683,292.720227266691,1062.38451755415,1701.88474835183,1018.72436020211,182.145372965252,39.8035131378666,37.9647644511295,1157.8672213404,1227.06272726596,1.32952671507345,517.037855950819,68.5357913150613,41.6233339741738,574.652437158206,301.293062269236,916.636379115823,0.171594997861965,68.281974246383,59.0199543935804,232.865706201394,120.682934993369,130.02133796623,948.991416888338,84.9514734310466,6.00420288709789,3.55953985119182,144.353644515679,432.344034068477,1746.88646918604,6.42349522926185,2.29160424011684,0.717873024576814,327.473560818345,24.036658695648,25.6647176058153,65.1679683121245,21.9782928960866,516.07705640662,1962.64663763756,1787.5999682875,1686.57147431941,133.467664933999,2810.98527791991,4.77137813885582,1.36203406111576,1408.84059314743,1350.49972794824,1687.51865307455,204.951215203417,291.723336868347,1.15424157650247,1200.18531223017,17.1796441912252,139.26693149842,60.9313941716975,195.243912533468,372.699313194363,102.916126997765,98.6517035844493,768.399520792654,17.9189868578725,12.963322368019,154.149233971641,543.575069693693,532.862552183959,135.969641384767,838.84941352349,2.4913879725274,3993.75763181435,5.17131825446202,2.51241943311111,128.144041575363,167.041160289051,64.9267468411584,47.6329044451988,54.6795553058298,325.981076330452,1199.50260562052,2044.41055642172,119.369815203024,1.08803560673895,1.0027595760908,0.919036730290385,0,161.608665041491,3.54427271986794,2.3184990331373,2.8793914062495,9.17454713104114,4.43716206147409,4.47094101177961,1175.41000241822,276.581642820142,460.103422621359,89.9215800666647,113.162859274821,1504.76005235751,1903.97247388902,539.854622041823,231.376176748752,292.93749487338,33.903137944241,31.1944198173193,31.1433927558788,5.49216164152617,47.3352791378938,241.238535304475,729.813020348833,160.571141301012,13.9438964770717,385.052133053123,213.1589908302,64.0678532084767,33.9134290177627,69.8697881837066,25.1331440031405,239.239991124341,116.746839208043,63.5870497691532,45.4753084680924,68.8705887448606,392.427237134554,146.28657040787,163.323502051471,51.7358082737469,51.42949471875,180.774261529062,1283.83092217688,797.778151877686,229.438772054919,675.473304437851,558.399006492078,847.042369562547,568.822824607166,1208.37706912388,724.778041783827,727.635091892784,859.434053343973,1537.51045104557,358.250888333134,2.62691028688288,145.950371320702,215.241041307648,127.581007519558,203.445716133622,778.117029114275,665.633188579675,1700.89280174618,1376.21662132472,113.317456616817,547.08537923843,346.487398373964,45.1810809933806,144.32192432765,997.83188491109,566.080259832579,531.873415356642,1360.75209187249,1285.21471681188,762.293663484635,1135.1276648482,649.145394684909,221.331028054779,2108.0533056285,1129.6053258308,204.199371396906,231.215335401666,0.834979926253974,0,2.87340946302872,1.8460472781668,147.714013985927,2.14387482639075,1.93770774758221,2.85538840518309,149.28267984006,697.908883325232,541.664651434518,711.176000821482,258.958442822207,305.139087318565,93.4906243946491,14.5155933714067,344.512257345612,10.1596821460302,1072.76982059591,614.308462580373,193.395760771895,0.87798860003913,4.68646859168308,2.68692835451539,1.45856363445986,963.769613490103,15.8994752388583,29.2764595249684,134.717373179469,336.653996830334,1.07140367175657,4.70797211106354,4.85572483389305,1.13831095675649,67.1476942131176,1368.40360222488,331.657810251967,1.15548546060614,1.97318320688547,610.58938200658,492.866341783758,13.8147843416905,1.41404030924402,305.776930175344,812.711261253451,0,64.0187261768647,6.86174824095901,1567.02098755345,877.041554402505,2460.61612789841,47.3009705190849,179.656414329353,83.6520537760355,37.328021737961,24.0927320939355,156.671568967269,121.003034758004,8.46774100381858,310.668913745732,166.891035487404,1309.08834639908,277.848892585716,717.281907260196,789.052810485248,1.29485767437579,2.77189578511867,1089.06575102657,239.941230571215,1478.49740908051,586.705835950875,479.485806015156,215.275232366258,781.677074060001,1203.02290038282,91.6828998322382,755.997519783188,71.01791175059,3.18692818280077,77.7732605435366,13.5452842309312,8.6143456094855,155.114652023108,356.846940844415,273.305233485414,341.368974708065,1149.02346966891,53.7447355203029,186.328492265885,89.6296065918009,146.067277649303,22.4777348868225,2.43677291357467,817.41446372289,3.19560003897299,301.954677715541,193.094796788121,192.32142439221,48.0662653776675,131.085848323508,769.741357918817,1008.73976036884,1651.7683576861,67.5166052891919,45.4269588951453,0.0918948995348449,244.690558349358,82.295666265008,48.2335434281121,4.1458471972939,2.0686599172379,91.9038461993228,496.840468464826,3511.11772759513,1005.48622216431,848.501804147502,11.1382526986789,96.4098991330706,188.542703678769,250.857009695511,323.761318841122,34.354936383092,108.779936590546,503.886232701932,364.260431480643,137.081320423727,52.4579180302467,171.287887954522,19.8031139576244,409.744451563949,1.99727032255654,503.385757771157,664.859053036905 | |||
|short_description=p2@HIST1H2AI,p2@HIST1H3H | |||
}} |
Latest revision as of 11:08, 17 September 2015
Short description: | p2@HIST1H2AI, p2@HIST1H3H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HIST1H2AI_5end, CAGE_peak_2_at_HIST1H3H_5end |
Coexpression cluster: | C241_Reticulocytes_chronic_Tracheal_Hodgkin_Endothelial_Hair_thymus |
Association with transcript: | -18bp_to_NM_003509, uc003njm.2_5end |
EntrezGene: | 8329,8357 |
HGNC: | 4775&submit=Submit 4725, 4775 |
UniProt: | A4FTV9P0C0S8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.68e-13 | 253 |
embryonic cell | 6.68e-11 | 250 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.22e-22 | 51 |
immune system cancer | 2.22e-22 | 51 |
cancer | 9.18e-22 | 235 |
disease of cellular proliferation | 1.85e-20 | 239 |
leukemia | 5.48e-18 | 39 |
myeloid leukemia | 7.74e-14 | 31 |
organ system cancer | 1.50e-13 | 137 |
cell type cancer | 5.45e-07 | 143 |