FFCP PHASE1:Hg19::chr6:56484469..56484489,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=667 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1090 | |||
|TSSclassifier=strong | |||
|UniProt=Q03001 | |||
|association_with_transcript=-420bp_to_X58677_5end | |||
|cluster_id=chr6:56484469..56484489,- | |||
|coexpression_cluster_id=C457 | |||
|description=CAGE_peak_38_at_DST_5end | |||
|id=chr6:56484469..56484489,- | |||
|ontology_enrichment_celltype=CL:0000066!6.05e-08!254;CL:0002076!2.58e-07!43;CL:0000223!3.72e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002623;3.25e-21;3!CL:0002076;5.23e-21;42!CL:0000240;3.71e-18;6!CL:0000311;3.71e-18;6!CL:0000079;3.71e-18;6!CL:0000237;3.71e-18;6!CL:0002251;5.84e-16;20!CL:0000622;5.91e-13;5!CL:0000312;1.71e-12;5!CL:0002159;9.34e-12;14!CL:0000154;7.02e-11;6!CL:0002231;5.01e-10;3!CL:0002166;5.73e-10;3!CL:0002336;1.97e-08;1!CL:0002261;1.97e-08;1!CL:0002170;1.97e-08;1!CL:0002327;1.05e-07;4!CL:0000150;2.10e-07;9!CL:0000362;3.73e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,7.52e-25,42;CL:0002623,3.15e-21,3;CL:0000223,3.56e-20,58;CL:0000240,3.80e-18,6;CL:0000311,3.80e-18,6;CL:0000079,3.80e-18,6;CL:0000237,3.80e-18,6;CL:0000036,3.80e-18,6;CL:0000357,3.80e-18,6;CL:0000114,3.80e-18,6;CL:0002251,5.78e-16,20;CL:0000622,5.79e-13,5;CL:0000312,1.71e-12,5;CL:0002159,9.14e-12,14;CL:0000154,6.91e-11,6;CL:0000066,8.19e-11,253;CL:0002231,4.58e-10,3;CL:0002166,5.49e-10,3;CL:0002336,2.04e-08,1;CL:0002261,2.04e-08,1;CL:0002170,2.04e-08,1;CL:0002327,9.01e-08,4;CL:0000150,2.08e-07,9;CL:0000362,3.73e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;3.71e-18;6!CL:0000114;3.71e-18;6!CL:0000223;7.35e-10;58 | |||
|ontology_enrichment_disease=DOID:1749!1.01e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3112;8.12e-08;1!DOID:6193;8.12e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,9.94e-08,1;DOID:6193,1.14e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000161!4.30e-11!35;UBERON:0003102!7.62e-09!95;UBERON:0000166!7.40e-08!21;UBERON:0001004!1.24e-07!72;UBERON:0004119!2.46e-07!169;UBERON:0000925!2.46e-07!169;UBERON:0006595!2.46e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;7.02e-11;6!UBERON:0003293;7.02e-11;6!UBERON:0003294;7.02e-11;6!UBERON:0010047;7.02e-11;6!UBERON:0003408;7.02e-11;6!UBERON:0000167;7.02e-11;6!UBERON:0000161;6.83e-09;19!UBERON:0000166;6.83e-09;19!UBERON:0000165;2.25e-08;28!UBERON:0007195;4.25e-08;1!UBERON:0007029;8.12e-08;1!UBERON:0001911;1.05e-07;4!UBERON:0001708;1.10e-07;4!UBERON:0008895;1.10e-07;4!UBERON:0001003;3.38e-07;15!UBERON:0007376;3.38e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,6.91e-11,6;UBERON:0003293,6.91e-11,6;UBERON:0003294,6.91e-11,6;UBERON:0010047,6.91e-11,6;UBERON:0000167,6.91e-11,6;UBERON:0003102,1.17e-10,99;UBERON:0000161,1.66e-08,36;UBERON:0007195,4.11e-08,1;UBERON:0000165,4.61e-08,29;UBERON:0000930,4.61e-08,29;UBERON:0007029,5.40e-08,1;UBERON:0001911,9.01e-08,4;UBERON:0005333,9.01e-08,4;UBERON:0008425,9.01e-08,4;UBERON:0005311,9.01e-08,4;UBERON:0001708,1.07e-07,4;UBERON:0008895,1.07e-07,4;UBERON:0000166,1.21e-07,22;UBERON:0001003,3.06e-07,15;UBERON:0007376,3.06e-07,15;UBERON:0007383,3.06e-07,15 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0.443458794925128,0.175669571386252,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.379891534993739,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0.245668634623536,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.538168907066586,0.213557388818567,0,0.600182192168805,0.103052529238439,0,0.37223371266318,0.506328996723799,0,0.757301322732344,0,0,0,0.10075209822764,0,0,3.27295344709002,0.573609190778008,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,1.86575485194663,1.1240175325762,3.61904300681871,5.18495292887766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18376766658517,2.26840155587818,1.88072897675981,5.52204483176528,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,1.80455823272956,6.90607417019222,0.114814448164607,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.366277859273374,0,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,0,4.95854746082934,0.576570202095319,2.16941611240793,4.14746901507755,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.769776901804097,0,0,0,0,0,0,2.98640420269047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0.199579371432817,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0.614321404198464,0,0,0,0,0,0,0,0,0.20453736500431,0.246169610922139,0,0.0898683511473268,0,0,0.197286811273867,0,2.22273980289274,0,0.0927680981618513,0,0,0,0,0.910347586283997,0,0.236387681767936,0,0,0,0,0.241192877250816,0,0.110579259931225,0.591095237907095,0,0,3.06732237412927,0.153900517007594,0,0,0.269272933229316,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0.19566461893209,1.94224303627274,0,0,0.30607276163049,0.063186579628488,0,0,0,0.330991955875499,0,0,0,1.38674673013139,0,0.195984794828755,0.261177619741208,0,1.0319161948297,0,0,0.0821154570532092,0.387956065953678,0,0,0.137041924646751,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0,0,0,0.114536596165916,0.171594997861965,0,0.248505071130865,0.707082103850386,0.67952103036807,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.196854963029498,0.0846733320657845,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0.335434687599266,0,0,0,0.35857467866569,0.383830394638891,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0.340776043570843,0.113312091520126,0,0,0.387848869084652,0.13223260174269,0,0,0,0.157204305099666,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0.3755727921195,0,0,0,0.553394539744923,0.499921631848426,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0.477890301491107,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0.150257608997218,0.380805212168795,0,0,0,0,0.398095888698616,1.20008329398946,0.343395705182793,0,0,0,0,0,0.226705925512272,0.231522474323834,0.244736704506468,0.179088841081487,0,0.219284049578707,0,0.771656153083659,0.506827321959218,0,0,0.911579868532147,0.138258436151731,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0.979156554036111,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0.322951291263702,0,0.687034029507179,0.353909170043221,4.95257216008533,0.808679663052368,0.381382095467167,0,0,0,0,0,0,1.14640342257068,0,0,0,0.206686796501184,0,0.546974809018219,0,0.496211178389294,0,1.66091155931474,0,0,0,0.227662191351298,0,0,0,0,0,0.236387681767936,0.333694205676207,0.156986185701028,0.471346769748006,0,0,0,0.47775168788705,0,0,0.23248285073625,0,0,4.97318793991288,9.5602347172612,1.38251932362818,0,0,0.340853619036631,0,0,0,0,0,0.098150233615243,0,0,0,0,1.94284397223656,0,0,0,0.11294608203896,0.329821550236287,0,0.154348316215889,0,0.47031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| |||
|short_description=p38@DST | |||
}} |
Latest revision as of 09:06, 19 September 2015
Short description: | p38@DST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_DST_5end |
Coexpression cluster: | C457_salivary_Prostate_oral_Small_Keratinocyte_Urothelial_Mammary |
Association with transcript: | -420bp_to_X58677_5end |
EntrezGene: | DST |
HGNC: | 1090 |
UniProt: | Q03001 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 7.52e-25 | 42 |
acinar cell of salivary gland | 3.15e-21 | 3 |
endodermal cell | 3.56e-20 | 58 |
stratified squamous epithelial cell | 3.80e-18 | 6 |
keratin accumulating cell | 3.80e-18 | 6 |
stratified epithelial cell | 3.80e-18 | 6 |
keratinizing barrier epithelial cell | 3.80e-18 | 6 |
epithelial fate stem cell | 3.80e-18 | 6 |
stratified epithelial stem cell | 3.80e-18 | 6 |
surface ectodermal cell | 3.80e-18 | 6 |
epithelial cell of alimentary canal | 5.78e-16 | 20 |
acinar cell | 5.79e-13 | 5 |
keratinocyte | 1.71e-12 | 5 |
general ecto-epithelial cell | 9.14e-12 | 14 |
protein secreting cell | 6.91e-11 | 6 |
epithelial cell | 8.19e-11 | 253 |
epithelial cell of prostate | 4.58e-10 | 3 |
epithelial cell of Malassez | 5.49e-10 | 3 |
buccal mucosa cell | 2.04e-08 | 1 |
endothelial cell of viscerocranial mucosa | 2.04e-08 | 1 |
keratinized cell of the oral mucosa | 2.04e-08 | 1 |
mammary gland epithelial cell | 9.01e-08 | 4 |
glandular epithelial cell | 2.08e-07 | 9 |
epidermal cell | 3.73e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 6.91e-11 | 6 |
gland of oral region | 6.91e-11 | 6 |
gland of foregut | 6.91e-11 | 6 |
oral gland | 6.91e-11 | 6 |
oral cavity | 6.91e-11 | 6 |
surface structure | 1.17e-10 | 99 |
orifice | 1.66e-08 | 36 |
stroma of bone marrow | 4.11e-08 | 1 |
mouth | 4.61e-08 | 29 |
stomodeum | 4.61e-08 | 29 |
surface | 5.40e-08 | 1 |
mammary gland | 9.01e-08 | 4 |
mammary bud | 9.01e-08 | 4 |
mammary ridge | 9.01e-08 | 4 |
mammary placode | 9.01e-08 | 4 |
jaw skeleton | 1.07e-07 | 4 |
splanchnocranium | 1.07e-07 | 4 |
oral opening | 1.21e-07 | 22 |
skin epidermis | 3.06e-07 | 15 |
outer epithelium | 3.06e-07 | 15 |
enveloping layer of ectoderm | 3.06e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 9.94e-08 | 1 |
epithelioid sarcoma | 1.14e-07 | 1 |