FFCP PHASE1:Hg19::chr7:104443997..104444016,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_ENST00000450896_5end | |||
|cluster_id=chr7:104443997..104444016,- | |||
|coexpression_cluster_id=C206 | |||
|description=CAGE_peak_1_at_ENST00000450896_5end | |||
|id=chr7:104443997..104444016,- | |||
|ontology_enrichment_celltype=CL:0000148!5.55e-88!10;CL:0000541!5.55e-88!10;CL:0000147!5.39e-63!14;CL:0000710!3.12e-44!20;CL:0000075!7.32e-33!27;CL:0002077!6.04e-27!33;CL:0002566!2.78e-26!1;CL:0000325!7.65e-23!39;CL:0000333!9.67e-21!41;CL:0000133!1.12e-14!59;CL:0000221!2.75e-12!71;CL:0002567!1.67e-09!3;CL:0000149!1.80e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.03e-52;10!CL:0000147;6.59e-38;14!CL:0002566;2.58e-34;1!CL:0000710;8.86e-27;20!CL:0000075;4.99e-20;27!CL:0002077;1.40e-14;34!CL:0000149;1.70e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.03e-52,10;CL:0000541,1.03e-52,10;CL:0000147,6.59e-38,14;CL:0002566,2.58e-34,1;CL:0000710,8.86e-27,20;CL:0000075,4.99e-20,27;CL:0002077,4.80e-16,34;CL:0000333,8.08e-13,41;CL:0000149,1.70e-09,4;CL:0000133,3.35e-09,59;CL:0000221,1.13e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!1.14e-50!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.04e-66;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.04e-66,2 | |||
|ontology_enrichment_uberon=UBERON:0001003!3.90e-08!14;UBERON:0007376!3.90e-08!14;UBERON:0007383!3.90e-08!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;7.09e-10;15!UBERON:0007376;7.09e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,7.09e-10,15;UBERON:0007376,7.09e-10,15;UBERON:0007383,7.09e-10,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.81024099793679,0.763976851116555,0,0,3.29047976650635,1.50171528921959,4.85904935471983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.82421028937415,28.8319986880417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000450896 | |||
}} |
Latest revision as of 04:33, 31 July 2015
Short description: | p1@ENST00000450896 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000450896_5end |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | -11bp_to_ENST00000450896_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.03e-52 | 10 |
melanoblast | 1.03e-52 | 10 |
pigment cell | 6.59e-38 | 14 |
dark melanocyte | 2.58e-34 | 1 |
neurecto-epithelial cell | 8.86e-27 | 20 |
columnar/cuboidal epithelial cell | 4.99e-20 | 27 |
ecto-epithelial cell | 4.80e-16 | 34 |
migratory neural crest cell | 8.08e-13 | 41 |
visual pigment cell | 1.70e-09 | 4 |
neurectodermal cell | 3.35e-09 | 59 |
ectodermal cell | 1.13e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 7.09e-10 | 15 |
outer epithelium | 7.09e-10 | 15 |
enveloping layer of ectoderm | 7.09e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.04e-66 | 2 |