FFCP PHASE1:Mm9::chr2:163372884..163372904,+: Difference between revisions
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{{FFCP|EntrezGene=15378|HGNC=|MCL_coexpression_id=810|UniProt=P49698|association_with_transcript=-18bp_to_ENSMUST00000109411_5end|description=CAGE_peak_1_at_Hnf4a_5end|id=chr2:163372884..163372904,+|ontology_enrichment_celltype=CL:0002563!1.20e-07!9;CL:0002251!1.20e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,1.60e-08,9;CL:0002251,1.60e-08,9;CL:0000066,4.13e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!5.55e-16!49;UBERON:0005173!5.55e-16!49;UBERON:0002417!5.55e-16!49;UBERON:0000916!5.55e-16!49;UBERON:0000160!1.00e-15!43;UBERON:0005409!7.81e-15!59;UBERON:0009854!1.03e-14!23;UBERON:0009856!1.03e-14!23;UBERON:0002107!3.28e-14!22;UBERON:0007499!3.28e-14!22;UBERON:0006925!3.28e-14!22;UBERON:0009497!3.28e-14!22;UBERON:0000015!3.28e-14!22;UBERON:0002423!3.28e-14!22;UBERON:0006235!3.28e-14!22;UBERON:0008835!3.28e-14!22;UBERON:0003894!3.28e-14!22;UBERON:0004161!3.28e-14!22;UBERON:0008836!3.28e-14!22;UBERON:0004119!3.37e-12!130;UBERON:0000925!3.37e-12!130;UBERON:0006595!3.37e-12!130;UBERON:0000344!5.24e-12!15;UBERON:0001007!1.06e-11!128;UBERON:0001555!1.06e-11!128;UBERON:0007026!1.06e-11!128;UBERON:0002365!2.35e-11!25;UBERON:0002330!2.35e-11!25;UBERON:0004921!9.39e-11!126;UBERON:0004185!9.39e-11!126;UBERON:0001242!9.83e-11!13;UBERON:0000060!9.83e-11!13;UBERON:0001262!9.83e-11!13;UBERON:0004786!9.83e-11!13;UBERON:0009569!6.88e-09!66;UBERON:0004923!8.24e-09!24;UBERON:0003350!1.20e-07!9;UBERON:0004808!1.20e-07!9;UBERON:0001277!1.20e-07!9;UBERON:0005256!6.98e-07!47;UBERON:0005177!8.34e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.90e-21,31;UBERON:0009854,1.53e-15,23;UBERON:0009856,1.53e-15,23;UBERON:0005409,3.55e-15,47;UBERON:0002107,5.78e-15,22;UBERON:0007499,5.78e-15,22;UBERON:0006925,5.78e-15,22;UBERON:0009497,5.78e-15,22;UBERON:0000015,5.78e-15,22;UBERON:0002423,5.78e-15,22;UBERON:0006235,5.78e-15,22;UBERON:0008835,5.78e-15,22;UBERON:0003894,5.78e-15,22;UBERON:0004161,5.78e-15,22;UBERON:0008836,5.78e-15,22;UBERON:0005172,1.12e-13,49;UBERON:0005173,1.12e-13,49;UBERON:0002417,1.12e-13,49;UBERON:0000916,1.12e-13,49;UBERON:0000344,1.68e-13,15;UBERON:0002365,3.42e-12,25;UBERON:0002330,3.42e-12,25;UBERON:0001242,4.80e-12,13;UBERON:0001262,4.80e-12,13;UBERON:0004786,4.80e-12,13;UBERON:0004119,1.03e-11,118;UBERON:0000925,1.03e-11,118;UBERON:0006595,1.03e-11,118;UBERON:0001007,3.43e-11,116;UBERON:0001555,3.43e-11,116;UBERON:0007026,3.43e-11,116;UBERON:0004921,3.47e-10,114;UBERON:0004923,6.15e-09,24;UBERON:0003104,1.19e-08,61;UBERON:0009142,1.19e-08,61;UBERON:0003350,1.60e-08,9;UBERON:0004808,1.60e-08,9;UBERON:0001277,1.60e-08,9;UBERON:0003929,1.06e-07,55;UBERON:0009569,3.53e-07,66|phase1_expression=0,376.544464842871,309.854482024274,126.127576114948,143.256178764655,73.6990003693196,46.9561407597007,0,0,0,0,0,0,0,0,0,0,0,0,0,9.69493507722195,0,0,71.8365978342396,75.7050627521661,215.911218507248,118.459548943746,159.448712187558,119.334707418603,173.144699145072,70.7320328990422,0,0,0,39.2838202861733,49.7041589621892,43.0797341713599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,34.4169550792555,39.4383373550495,167.847692599361,107.862885296313,81.5408934517151,31.0382168491172,0,0,0,0,0,0,0,0,0,0,100.253446393335,0,0.445326417194474,1.04091196059682,1.52232739156071,2.99800146432876,1.05505848386836,1.88141931417128,0.879666139307728,15.3260879995312,0,0,0,0,0,26.0948465705371,0,0,95.2854815928046,0,0,0,0,0,0,0,0,0,0,1.12023300235348,0.248813941220186,0.758168275301024,0,0,0,0,1.20563854268572,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,159.922690964158,77.2195654657549,0.426576501070468,0.928946687441754,14.0465532841082,25.6138076271645,24.6839628667806,45.6541502670142,115.785091016861,37.5513616770745,64.5931486616693,62.4723322209214,65.8978614462626,94.3760379086933,83.6454253015067,84.4358998598517,3.22435431620239,7.65465034485183,7.88954149711563,10.5898690479563,18.6194387680921,25.9502533594179,41.29345874214,97.570307814517,69.2364389780463,72.4341352220969,159.195060745799,7.17433954579204,9.23827277032054,10.3436571697033,14.2002084971952,20.7412357387078,29.7912246584261,31.0711828446875,93.0656201688703,47.22456306835,84.8232418511392,75.1724714290377,77.6973806055256,124.521386827926,95.4394239936573,173.197224169449,0,0,0,0.339490171550376,0,0,0.714130922658041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,1.95872164033981,0.162886959353576,0,0,0.485561272309963,2.11626489875326,0.188605079755898,0,0,11.1124166062335,0.727067458955011,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,3.52007562095566,1.90648863777438,0,0,0,0,0,0,91.816463538403,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.316335993581135,1.01659733563424,4.32021363287205,1.04544148007234,2.18362563746178,0.944050424693745,7.60411792673091,0,77.7689839750757,0,0,0,0,0,0.258319646955462,0,0,1.3020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,1.19513524027894,3.40349403895612,6.28839487883947,8.64064489715066,3.77819437262746,5.56294654545014,2.56735367673452,4.80124702351215,2.28131369901216,3.01802146217722,6.9294715527713,6.01836432605771,7.40917549527411,4.76293691283074,6.72129090480162,7.13764115715709,7.82963211526283,4.26876868389752,5.14303878578123,4.43689515398344,8.10683045820891,4.0696996657052,5.36423468367385,5.92302255241735,5.85369513192872,4.47218509444333,6.3827933507555,1.68342681497322,5.33857581558784,7.88035859004508,2.86461730218783,5.57772628269478,5.01557188550968,0,4.44470056046276,8.80971321598023,0,0.661774257358546,0|short_description=p1@Hnf4a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15378 | |||
|HGNC= | |||
|MCL_coexpression_id=810 | |||
|TSSclassifier=NA | |||
|UniProt=P49698 | |||
|association_with_transcript=-18bp_to_ENSMUST00000109411_5end | |||
|cluster_id=chr2:163372884..163372904,+ | |||
|description=CAGE_peak_1_at_Hnf4a_5end | |||
|id=chr2:163372884..163372904,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.20e-07!9;CL:0002251!1.20e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.60e-08,9;CL:0002251,1.60e-08,9;CL:0000066,4.13e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!5.55e-16!49;UBERON:0005173!5.55e-16!49;UBERON:0002417!5.55e-16!49;UBERON:0000916!5.55e-16!49;UBERON:0000160!1.00e-15!43;UBERON:0005409!7.81e-15!59;UBERON:0009854!1.03e-14!23;UBERON:0009856!1.03e-14!23;UBERON:0002107!3.28e-14!22;UBERON:0007499!3.28e-14!22;UBERON:0006925!3.28e-14!22;UBERON:0009497!3.28e-14!22;UBERON:0000015!3.28e-14!22;UBERON:0002423!3.28e-14!22;UBERON:0006235!3.28e-14!22;UBERON:0008835!3.28e-14!22;UBERON:0003894!3.28e-14!22;UBERON:0004161!3.28e-14!22;UBERON:0008836!3.28e-14!22;UBERON:0004119!3.37e-12!130;UBERON:0000925!3.37e-12!130;UBERON:0006595!3.37e-12!130;UBERON:0000344!5.24e-12!15;UBERON:0001007!1.06e-11!128;UBERON:0001555!1.06e-11!128;UBERON:0007026!1.06e-11!128;UBERON:0002365!2.35e-11!25;UBERON:0002330!2.35e-11!25;UBERON:0004921!9.39e-11!126;UBERON:0004185!9.39e-11!126;UBERON:0001242!9.83e-11!13;UBERON:0000060!9.83e-11!13;UBERON:0001262!9.83e-11!13;UBERON:0004786!9.83e-11!13;UBERON:0009569!6.88e-09!66;UBERON:0004923!8.24e-09!24;UBERON:0003350!1.20e-07!9;UBERON:0004808!1.20e-07!9;UBERON:0001277!1.20e-07!9;UBERON:0005256!6.98e-07!47;UBERON:0005177!8.34e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.90e-21,31;UBERON:0009854,1.53e-15,23;UBERON:0009856,1.53e-15,23;UBERON:0005409,3.55e-15,47;UBERON:0002107,5.78e-15,22;UBERON:0007499,5.78e-15,22;UBERON:0006925,5.78e-15,22;UBERON:0009497,5.78e-15,22;UBERON:0000015,5.78e-15,22;UBERON:0002423,5.78e-15,22;UBERON:0006235,5.78e-15,22;UBERON:0008835,5.78e-15,22;UBERON:0003894,5.78e-15,22;UBERON:0004161,5.78e-15,22;UBERON:0008836,5.78e-15,22;UBERON:0005172,1.12e-13,49;UBERON:0005173,1.12e-13,49;UBERON:0002417,1.12e-13,49;UBERON:0000916,1.12e-13,49;UBERON:0000344,1.68e-13,15;UBERON:0002365,3.42e-12,25;UBERON:0002330,3.42e-12,25;UBERON:0001242,4.80e-12,13;UBERON:0001262,4.80e-12,13;UBERON:0004786,4.80e-12,13;UBERON:0004119,1.03e-11,118;UBERON:0000925,1.03e-11,118;UBERON:0006595,1.03e-11,118;UBERON:0001007,3.43e-11,116;UBERON:0001555,3.43e-11,116;UBERON:0007026,3.43e-11,116;UBERON:0004921,3.47e-10,114;UBERON:0004923,6.15e-09,24;UBERON:0003104,1.19e-08,61;UBERON:0009142,1.19e-08,61;UBERON:0003350,1.60e-08,9;UBERON:0004808,1.60e-08,9;UBERON:0001277,1.60e-08,9;UBERON:0003929,1.06e-07,55;UBERON:0009569,3.53e-07,66 | |||
|phase1_expression=0,376.544464842871,309.854482024274,126.127576114948,143.256178764655,73.6990003693196,46.9561407597007,0,0,0,0,0,0,0,0,0,0,0,0,0,9.69493507722195,0,0,71.8365978342396,75.7050627521661,215.911218507248,118.459548943746,159.448712187558,119.334707418603,173.144699145072,70.7320328990422,0,0,0,39.2838202861733,49.7041589621892,43.0797341713599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,34.4169550792555,39.4383373550495,167.847692599361,107.862885296313,81.5408934517151,31.0382168491172,0,0,0,0,0,0,0,0,0,0,100.253446393335,0,0.445326417194474,1.04091196059682,1.52232739156071,2.99800146432876,1.05505848386836,1.88141931417128,0.879666139307728,15.3260879995312,0,0,0,0,0,26.0948465705371,0,0,95.2854815928046,0,0,0,0,0,0,0,0,0,0,1.12023300235348,0.248813941220186,0.758168275301024,0,0,0,0,1.20563854268572,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,159.922690964158,77.2195654657549,0.426576501070468,0.928946687441754,14.0465532841082,25.6138076271645,24.6839628667806,45.6541502670142,115.785091016861,37.5513616770745,64.5931486616693,62.4723322209214,65.8978614462626,94.3760379086933,83.6454253015067,84.4358998598517,3.22435431620239,7.65465034485183,7.88954149711563,10.5898690479563,18.6194387680921,25.9502533594179,41.29345874214,97.570307814517,69.2364389780463,72.4341352220969,159.195060745799,7.17433954579204,9.23827277032054,10.3436571697033,14.2002084971952,20.7412357387078,29.7912246584261,31.0711828446875,93.0656201688703,47.22456306835,84.8232418511392,75.1724714290377,77.6973806055256,124.521386827926,95.4394239936573,173.197224169449,0,0,0,0.339490171550376,0,0,0.714130922658041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,1.95872164033981,0.162886959353576,0,0,0.485561272309963,2.11626489875326,0.188605079755898,0,0,11.1124166062335,0.727067458955011,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,3.52007562095566,1.90648863777438,0,0,0,0,0,0,91.816463538403,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.316335993581135,1.01659733563424,4.32021363287205,1.04544148007234,2.18362563746178,0.944050424693745,7.60411792673091,0,77.7689839750757,0,0,0,0,0,0.258319646955462,0,0,1.3020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,1.19513524027894,3.40349403895612,6.28839487883947,8.64064489715066,3.77819437262746,5.56294654545014,2.56735367673452,4.80124702351215,2.28131369901216,3.01802146217722,6.9294715527713,6.01836432605771,7.40917549527411,4.76293691283074,6.72129090480162,7.13764115715709,7.82963211526283,4.26876868389752,5.14303878578123,4.43689515398344,8.10683045820891,4.0696996657052,5.36423468367385,5.92302255241735,5.85369513192872,4.47218509444333,6.3827933507555,1.68342681497322,5.33857581558784,7.88035859004508,2.86461730218783,5.57772628269478,5.01557188550968,0,4.44470056046276,8.80971321598023,0,0.661774257358546,0 | |||
|short_description=p1@Hnf4a | |||
}} |
Latest revision as of 02:06, 26 September 2015
Short description: | p1@Hnf4a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hnf4a_5end |
Coexpression cluster: | MCL_coexpression_mm9:810 |
Association with transcript: | -18bp_to_ENSMUST00000109411_5end |
EntrezGene: | Hnf4a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.60e-08 | 9 |
epithelial cell of alimentary canal | 1.60e-08 | 9 |
epithelial cell | 4.13e-07 | 25 |