FFCP PHASE1:Mm9::chr10:127472643..127472650,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:127472643..127472650,+
|short_description=p4@Naca
|description=CAGE_peak_4_at_Naca_5end
|association_with_transcript=241bp_to_ENSMUST00000073868,ENSMUST00...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17938 | |EntrezGene=17938 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2528 | |||
|TSSclassifier=NA | |||
|UniProt=Q60817,P70670 | |UniProt=Q60817,P70670 | ||
|association_with_transcript=241bp_to_ENSMUST00000073868,ENSMUST00000092048,NM_001113199,NM_013608,uc007hlb.2,uc007hlc.2_5end | |||
|cluster_id=chr10:127472643..127472650,+ | |||
|description=CAGE_peak_4_at_Naca_5end | |||
|id=chr10:127472643..127472650,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!2.09e-10!23;UBERON:0001009!2.09e-10!23;UBERON:0007100!2.94e-10!18;UBERON:0000948!2.94e-10!18;UBERON:0005498!2.94e-10!18;UBERON:0004140!2.94e-10!18;UBERON:0009881!2.94e-10!18;UBERON:0004141!2.94e-10!18;UBERON:0003084!2.94e-10!18;UBERON:0007005!2.94e-10!18;UBERON:0004139!2.94e-10!18;UBERON:0004291!2.94e-10!18;UBERON:0004872!2.32e-07!33;UBERON:0003914!9.67e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,2.09e-10,23;UBERON:0001009,2.09e-10,23;UBERON:0007100,2.94e-10,18;UBERON:0000948,2.94e-10,18;UBERON:0005498,2.94e-10,18;UBERON:0004140,2.94e-10,18;UBERON:0009881,2.94e-10,18;UBERON:0004141,2.94e-10,18;UBERON:0003084,2.94e-10,18;UBERON:0007005,2.94e-10,18;UBERON:0004139,2.94e-10,18;UBERON:0004291,2.94e-10,18;UBERON:0004872,2.32e-07,33;UBERON:0003914,9.67e-07,47 | |||
|phase1_expression=21.2997966649376,6.97950815278722,5.45999087267443,3.93203474698879,4.00716583957078,11.5836697619204,14.0167584357315,7.48915275961142,18.0209564354133,28.3218076849612,29.6207085030124,27.1225340584144,4.62241970814255,4.19617931611188,20.9859149943868,22.4747546802707,22.3859801001007,8.3597473819933,9.46089591879598,12.3072999021429,17.093701320365,19.2624445329717,24.5527801790599,15.0392877425802,14.6821939882989,10.9104073181854,11.630573896295,13.7901588918969,11.5914285868388,12.8535366177565,21.7295900442199,34.9266870402797,42.4394703433353,31.6963362030877,30.3294200738838,24.1040235769814,27.1545243828951,3.76678467663217,8.5946887897618,9.42342739152837,2.94115744015507,2.73218193983378,4.85510353031154,60.3045758103015,55.554558308294,68.8300320606306,9.38869613217647,13.2995345392072,12.9614847813338,13.8045228342741,28.557230011574,11.5002051491977,7.3824346665404,7.25362142011344,8.73843877770406,33.958245556745,37.2493471920384,30.9403255366465,8.49729135610311,6.87688273053643,7.60597684207415,25.4133399051849,25.789549087223,6.29929802096979,0.988866362566974,5.6838409195688,6.89080254192331,8.06858441175265,10.9910989046986,11.7455166348571,14.9330722559481,13.7112472513826,10.8225585066291,12.8615339175702,15.1435844208813,12.8690630125403,13.2139057199266,15.5778552463929,16.2822925251618,11.2103344570665,12.9912453915422,14.5855743755893,17.8677119360884,28.138130501584,16.8078072554491,13.258286346315,15.5185132071022,13.7935589910722,32.1836321666032,23.5027551932103,6.95674772884027,10.3250865237766,59.1575060325743,16.1910957491345,11.0461990966104,18.3691023709908,19.1004411379183,51.8108180637296,93.5229616570328,78.0880459667852,26.4785629180159,33.3648841277226,25.4805239706646,14.2213340630666,43.7311902842653,39.0174192831652,35.8922355960496,16.0999270403875,5.95557132388495,14.8442139064825,29.319020223477,31.9688752227748,27.9044751679831,36.7763242948399,33.3951928265402,15.5826573248798,13.5957232253906,18.5087176857487,17.6922110389975,37.2063754879041,28.04687284447,29.5773904412485,13.0474232852686,6.73395833126558,7.54008144528438,11.240110429178,26.8385878893261,50.9917321344397,28.0825201831473,15.7280171375064,13.7250180845588,17.0889918873496,10.7771078519211,11.2514801225345,11.8439185398949,13.4660248346239,21.6917845001174,14.0579876789405,21.4814344668623,14.9413717679397,23.6819206192121,21.6107978167465,17.8261508507296,18.8381022294644,12.654788842147,13.5800543501941,10.4945931506896,12.6764651662118,18.1077114063587,24.3946843416487,19.1786725338704,26.0842921588814,23.3559689349502,24.3776516565517,23.0475992776897,34.8309966932363,51.9637758611794,39.1168818814367,31.8263119323064,35.6256328761063,40.8075344367107,35.1121019848979,32.4340287751738,38.959317885986,38.7210453347319,38.3681008838173,40.7775570127421,63.5203462477402,53.6465110717946,49.9069090800449,58.1263364443786,43.2751962778984,49.6183260557774,40.9329577219134,14.0894265537965,19.7576855768226,3.96502539580558,12.9580777665137,28.7939138222566,23.9203772016252,20.2321914275687,17.3447831176075,15.1217069814512,15.5985013412299,14.7104009078799,18.7756808385372,16.3367885720175,17.3092130675801,13.062593836981,11.6846523125049,14.9135254413539,11.3510525754989,26.5535061334314,21.5929688832387,16.9061603509621,19.3468761453049,16.4859614092482,17.1131400532377,8.22074982615345,7.52811754695971,8.94892748695836,9.99517027766584,21.0481365231876,27.1957522317233,30.2700852474333,24.2851081375642,22.1117532313468,19.7765270996982,17.3145579211365,13.5217184601881,34.8590737566326,25.2596500133035,15.814502718009,17.1184835927512,17.4741096944154,15.6598904327209,20.451305141498,17.8504102904446,8.68339993783042,31.4555743539005,21.6743418667894,22.9155865796504,21.1221223459652,14.7405506548798,10.4739201989846,10.9274842800367,10.719189799221,10.1873757238436,6.69710028361446,7.70157579163969,7.59813920209941,7.23245292907558,9.04747703635634,11.4220193601929,10.3270497333998,12.9690270763224,17.3394637186815,15.2375192569864,80.6559931253243,38.6280518622691,24.2941328950518,20.6932534477218,14.6487910458303,17.4447222505363,16.4871018820972,13.0215204162863,19.02610297872,18.1198631905013,17.7879500075936,6.10510501201433,16.6069899693674,18.8749539887291,23.2928351875614,11.71287873105,26.5490276679926,27.1914312493579,31.4416499243341,31.497048319235,17.4228116799656,14.1420168054207,23.5169746783081,13.0872142611902,19.250858432775,14.2216541071117,21.0837217149998,12.3762651897824,8.5109901438447,23.7680644121329,16.5579115241926,16.0752776273694,14.0098784577396,14.9829806785739,15.1385098953951,13.3964577610424,25.5792161789444,13.3454204644207,9.48272111636336,27.3711179882857,39.7202489671928,20.7476461752856,20.5320431685395,22.3231623653283,13.1166376483433,17.8008289930089,13.1570578214347,19.4003655885429,24.8160666675414,21.0972671845254,15.9932246433599,15.5569157780435,17.677756719361,14.5549510416604,16.9985967779441,18.1387417422872,23.0925275314229,19.7219883113043,24.4092070257271,21.9542710815192,17.6873676634404,22.2526171534954,16.2000773221658,19.6316956488022,12.3134224627203,9.32008969630389,77.2259325997341,32.8936401296753,39.2136622383321,32.6677996418,29.0609602824895,32.9464444707017,30.1608103319588,16.7963656448696,20.5524315074393,19.0851455452545,42.916470932422,13.2724670663835,33.0442100922968,27.7319584345034,27.9329769402259,19.5139098277555,19.2720914137827,18.5100992260752,16.2458479892035,15.750766191911,17.146531497375,14.0148397340208,12.8644402576473,10.1022433722346,8.53201385925453,47.159919791964,55.7184742968902,54.3665971053423,57.2486541801508,19.7053385912834,16.8914227906064,18.3151624267265,31.0834149664645,12.0377304968487,12.4245405375755,14.7304075682297,14.8952833494243,10.4830441229649,13.7016503954128,19.6402413321322,21.6007200074178,12.6089936902782,15.406841905463,7.24864436452548,31.5513536655897,16.7590446828433,25.439307257366,29.1728060481953,31.4419743941973,29.9664918773523,30.2255549810197,35.4380298450898,30.8082441208143,24.0062351175608,33.9662261852921,31.3119726700887,28.3733767633744,27.1466646196646,28.2008152572061,31.9116773159659,24.7992457521991,26.6214724239913,26.7855835522149,30.764574308089,34.2869252385415,32.3005967209994,27.6585980338892,31.2494795759506,31.9971893412124,29.1074251147367,30.3660434968802,37.8820384470494,24.9879569476386,39.2799590160417,28.4724043498018,25.4141564528954,35.603100755763,25.8744524780563,29.5147114801146,25.4806789496705,27.6039297965582,41.8998555394182,76.1327561633997,39.0446811841542,38.7219285486104 | |phase1_expression=21.2997966649376,6.97950815278722,5.45999087267443,3.93203474698879,4.00716583957078,11.5836697619204,14.0167584357315,7.48915275961142,18.0209564354133,28.3218076849612,29.6207085030124,27.1225340584144,4.62241970814255,4.19617931611188,20.9859149943868,22.4747546802707,22.3859801001007,8.3597473819933,9.46089591879598,12.3072999021429,17.093701320365,19.2624445329717,24.5527801790599,15.0392877425802,14.6821939882989,10.9104073181854,11.630573896295,13.7901588918969,11.5914285868388,12.8535366177565,21.7295900442199,34.9266870402797,42.4394703433353,31.6963362030877,30.3294200738838,24.1040235769814,27.1545243828951,3.76678467663217,8.5946887897618,9.42342739152837,2.94115744015507,2.73218193983378,4.85510353031154,60.3045758103015,55.554558308294,68.8300320606306,9.38869613217647,13.2995345392072,12.9614847813338,13.8045228342741,28.557230011574,11.5002051491977,7.3824346665404,7.25362142011344,8.73843877770406,33.958245556745,37.2493471920384,30.9403255366465,8.49729135610311,6.87688273053643,7.60597684207415,25.4133399051849,25.789549087223,6.29929802096979,0.988866362566974,5.6838409195688,6.89080254192331,8.06858441175265,10.9910989046986,11.7455166348571,14.9330722559481,13.7112472513826,10.8225585066291,12.8615339175702,15.1435844208813,12.8690630125403,13.2139057199266,15.5778552463929,16.2822925251618,11.2103344570665,12.9912453915422,14.5855743755893,17.8677119360884,28.138130501584,16.8078072554491,13.258286346315,15.5185132071022,13.7935589910722,32.1836321666032,23.5027551932103,6.95674772884027,10.3250865237766,59.1575060325743,16.1910957491345,11.0461990966104,18.3691023709908,19.1004411379183,51.8108180637296,93.5229616570328,78.0880459667852,26.4785629180159,33.3648841277226,25.4805239706646,14.2213340630666,43.7311902842653,39.0174192831652,35.8922355960496,16.0999270403875,5.95557132388495,14.8442139064825,29.319020223477,31.9688752227748,27.9044751679831,36.7763242948399,33.3951928265402,15.5826573248798,13.5957232253906,18.5087176857487,17.6922110389975,37.2063754879041,28.04687284447,29.5773904412485,13.0474232852686,6.73395833126558,7.54008144528438,11.240110429178,26.8385878893261,50.9917321344397,28.0825201831473,15.7280171375064,13.7250180845588,17.0889918873496,10.7771078519211,11.2514801225345,11.8439185398949,13.4660248346239,21.6917845001174,14.0579876789405,21.4814344668623,14.9413717679397,23.6819206192121,21.6107978167465,17.8261508507296,18.8381022294644,12.654788842147,13.5800543501941,10.4945931506896,12.6764651662118,18.1077114063587,24.3946843416487,19.1786725338704,26.0842921588814,23.3559689349502,24.3776516565517,23.0475992776897,34.8309966932363,51.9637758611794,39.1168818814367,31.8263119323064,35.6256328761063,40.8075344367107,35.1121019848979,32.4340287751738,38.959317885986,38.7210453347319,38.3681008838173,40.7775570127421,63.5203462477402,53.6465110717946,49.9069090800449,58.1263364443786,43.2751962778984,49.6183260557774,40.9329577219134,14.0894265537965,19.7576855768226,3.96502539580558,12.9580777665137,28.7939138222566,23.9203772016252,20.2321914275687,17.3447831176075,15.1217069814512,15.5985013412299,14.7104009078799,18.7756808385372,16.3367885720175,17.3092130675801,13.062593836981,11.6846523125049,14.9135254413539,11.3510525754989,26.5535061334314,21.5929688832387,16.9061603509621,19.3468761453049,16.4859614092482,17.1131400532377,8.22074982615345,7.52811754695971,8.94892748695836,9.99517027766584,21.0481365231876,27.1957522317233,30.2700852474333,24.2851081375642,22.1117532313468,19.7765270996982,17.3145579211365,13.5217184601881,34.8590737566326,25.2596500133035,15.814502718009,17.1184835927512,17.4741096944154,15.6598904327209,20.451305141498,17.8504102904446,8.68339993783042,31.4555743539005,21.6743418667894,22.9155865796504,21.1221223459652,14.7405506548798,10.4739201989846,10.9274842800367,10.719189799221,10.1873757238436,6.69710028361446,7.70157579163969,7.59813920209941,7.23245292907558,9.04747703635634,11.4220193601929,10.3270497333998,12.9690270763224,17.3394637186815,15.2375192569864,80.6559931253243,38.6280518622691,24.2941328950518,20.6932534477218,14.6487910458303,17.4447222505363,16.4871018820972,13.0215204162863,19.02610297872,18.1198631905013,17.7879500075936,6.10510501201433,16.6069899693674,18.8749539887291,23.2928351875614,11.71287873105,26.5490276679926,27.1914312493579,31.4416499243341,31.497048319235,17.4228116799656,14.1420168054207,23.5169746783081,13.0872142611902,19.250858432775,14.2216541071117,21.0837217149998,12.3762651897824,8.5109901438447,23.7680644121329,16.5579115241926,16.0752776273694,14.0098784577396,14.9829806785739,15.1385098953951,13.3964577610424,25.5792161789444,13.3454204644207,9.48272111636336,27.3711179882857,39.7202489671928,20.7476461752856,20.5320431685395,22.3231623653283,13.1166376483433,17.8008289930089,13.1570578214347,19.4003655885429,24.8160666675414,21.0972671845254,15.9932246433599,15.5569157780435,17.677756719361,14.5549510416604,16.9985967779441,18.1387417422872,23.0925275314229,19.7219883113043,24.4092070257271,21.9542710815192,17.6873676634404,22.2526171534954,16.2000773221658,19.6316956488022,12.3134224627203,9.32008969630389,77.2259325997341,32.8936401296753,39.2136622383321,32.6677996418,29.0609602824895,32.9464444707017,30.1608103319588,16.7963656448696,20.5524315074393,19.0851455452545,42.916470932422,13.2724670663835,33.0442100922968,27.7319584345034,27.9329769402259,19.5139098277555,19.2720914137827,18.5100992260752,16.2458479892035,15.750766191911,17.146531497375,14.0148397340208,12.8644402576473,10.1022433722346,8.53201385925453,47.159919791964,55.7184742968902,54.3665971053423,57.2486541801508,19.7053385912834,16.8914227906064,18.3151624267265,31.0834149664645,12.0377304968487,12.4245405375755,14.7304075682297,14.8952833494243,10.4830441229649,13.7016503954128,19.6402413321322,21.6007200074178,12.6089936902782,15.406841905463,7.24864436452548,31.5513536655897,16.7590446828433,25.439307257366,29.1728060481953,31.4419743941973,29.9664918773523,30.2255549810197,35.4380298450898,30.8082441208143,24.0062351175608,33.9662261852921,31.3119726700887,28.3733767633744,27.1466646196646,28.2008152572061,31.9116773159659,24.7992457521991,26.6214724239913,26.7855835522149,30.764574308089,34.2869252385415,32.3005967209994,27.6585980338892,31.2494795759506,31.9971893412124,29.1074251147367,30.3660434968802,37.8820384470494,24.9879569476386,39.2799590160417,28.4724043498018,25.4141564528954,35.603100755763,25.8744524780563,29.5147114801146,25.4806789496705,27.6039297965582,41.8998555394182,76.1327561633997,39.0446811841542,38.7219285486104 | ||
|short_description=p4@Naca | |||
}} | }} |
Latest revision as of 18:22, 25 September 2015
Short description: | p4@Naca |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Naca_5end |
Coexpression cluster: | MCL_coexpression_mm9:2528 |
Association with transcript: | 241bp_to_ENSMUST00000073868, ENSMUST00000092048, NM_001113199, NM_013608, uc007hlb.2, uc007hlc.2_5end |
EntrezGene: | Naca |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 2.09e-10 | 23 |
circulatory system | 2.09e-10 | 23 |
primary circulatory organ | 2.94e-10 | 18 |
heart | 2.94e-10 | 18 |
primitive heart tube | 2.94e-10 | 18 |
primary heart field | 2.94e-10 | 18 |
anterior lateral plate mesoderm | 2.94e-10 | 18 |
heart tube | 2.94e-10 | 18 |
heart primordium | 2.94e-10 | 18 |
cardiac mesoderm | 2.94e-10 | 18 |
cardiogenic plate | 2.94e-10 | 18 |
heart rudiment | 2.94e-10 | 18 |
splanchnic layer of lateral plate mesoderm | 2.32e-07 | 33 |
epithelial tube | 9.67e-07 | 47 |