FFCP PHASE1:Mm9::chr2:24241895..24241906,+: Difference between revisions
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{{FFCP|EntrezGene=215632|HGNC=|MCL_coexpression_id=3|UniProt=|association_with_transcript=-182bp_to_ENSMUST00000127242_5end|description=CAGE_peak_10_at_Psd4_5end|id=chr2:24241895..24241906,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,2.23e-10,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.12e-29,3;DOID:4045,1.12e-29,3;DOID:0050686,3.13e-15,6|ontology_enrichment_uberon=UBERON:0002193!1.81e-08!48;UBERON:0002390!1.64e-07!45;UBERON:0003061!1.64e-07!45;UBERON:0001474!2.93e-07!22;UBERON:0004765!2.93e-07!22;UBERON:0001434!2.93e-07!22;UBERON:0002204!3.86e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002204,8.45e-11,32;UBERON:0001134,2.23e-10,9;UBERON:0002036,2.23e-10,9;UBERON:0002385,2.23e-10,9;UBERON:0000486,2.23e-10,9;UBERON:0007503,2.23e-10,9;UBERON:0001015,2.23e-10,9;UBERON:0002329,2.23e-10,9;UBERON:0003082,2.23e-10,9;UBERON:0003059,2.23e-10,9;UBERON:0007282,2.23e-10,9;UBERON:0004290,2.23e-10,9;UBERON:0009618,2.23e-10,9;UBERON:0000383,2.11e-09,10;UBERON:0007524,1.33e-08,11;UBERON:0003077,1.33e-08,11;UBERON:0007285,1.33e-08,11|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0,0,0,0,0,0,0,0,1.10411757875383,0.274228867211478,0.42438965179803,0.0850432901510698,0.198581902401771,0.261199789138935,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,2.3440060335714,4.71171369576418,10.5881667845583,10.9287277593351,5.82612423637384,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0.230615497256059,0,0,0,0,0,2.65383165584962,0,0.220841518460394,0.969750506270444,0,0,0,0.255457055208591,0,0.599902730993408,0.762421362438388,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38992817423824,0,0.216138049874694,0.398282546508734,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.50925170356284,0.287696137450811,0.324270453550071,0,0,0.744281895337007,0,0,0,0,0,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.854354403989263,0,0.185194527369712,0.376736914009382,0,0,0.509935289981566,0.839708713941948,0.138199973804424,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0.358053391334963,0,0,0,0,0.15241361331,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p10@Psd4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=215632 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-182bp_to_ENSMUST00000127242_5end | |||
|cluster_id=chr2:24241895..24241906,+ | |||
|description=CAGE_peak_10_at_Psd4_5end | |||
|id=chr2:24241895..24241906,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,2.23e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.12e-29,3;DOID:4045,1.12e-29,3;DOID:0050686,3.13e-15,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.81e-08!48;UBERON:0002390!1.64e-07!45;UBERON:0003061!1.64e-07!45;UBERON:0001474!2.93e-07!22;UBERON:0004765!2.93e-07!22;UBERON:0001434!2.93e-07!22;UBERON:0002204!3.86e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,8.45e-11,32;UBERON:0001134,2.23e-10,9;UBERON:0002036,2.23e-10,9;UBERON:0002385,2.23e-10,9;UBERON:0000486,2.23e-10,9;UBERON:0007503,2.23e-10,9;UBERON:0001015,2.23e-10,9;UBERON:0002329,2.23e-10,9;UBERON:0003082,2.23e-10,9;UBERON:0003059,2.23e-10,9;UBERON:0007282,2.23e-10,9;UBERON:0004290,2.23e-10,9;UBERON:0009618,2.23e-10,9;UBERON:0000383,2.11e-09,10;UBERON:0007524,1.33e-08,11;UBERON:0003077,1.33e-08,11;UBERON:0007285,1.33e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0,0,0,0,0,0,0,0,1.10411757875383,0.274228867211478,0.42438965179803,0.0850432901510698,0.198581902401771,0.261199789138935,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,2.3440060335714,4.71171369576418,10.5881667845583,10.9287277593351,5.82612423637384,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0.230615497256059,0,0,0,0,0,2.65383165584962,0,0.220841518460394,0.969750506270444,0,0,0,0.255457055208591,0,0.599902730993408,0.762421362438388,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38992817423824,0,0.216138049874694,0.398282546508734,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.50925170356284,0.287696137450811,0.324270453550071,0,0,0.744281895337007,0,0,0,0,0,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.854354403989263,0,0.185194527369712,0.376736914009382,0,0,0.509935289981566,0.839708713941948,0.138199973804424,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0.358053391334963,0,0,0,0,0.15241361331,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p10@Psd4 | |||
}} |
Latest revision as of 09:40, 26 September 2015
Short description: | p10@Psd4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Psd4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -182bp_to_ENSMUST00000127242_5end |
EntrezGene: | Psd4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 2.23e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 8.45e-11 | 32 |
skeletal muscle tissue | 2.23e-10 | 9 |
striated muscle tissue | 2.23e-10 | 9 |
muscle tissue | 2.23e-10 | 9 |
multilaminar epithelium | 2.23e-10 | 9 |
epithelial vesicle | 2.23e-10 | 9 |
musculature | 2.23e-10 | 9 |
somite | 2.23e-10 | 9 |
myotome | 2.23e-10 | 9 |
presomitic mesoderm | 2.23e-10 | 9 |
presumptive segmental plate | 2.23e-10 | 9 |
dermomyotome | 2.23e-10 | 9 |
trunk paraxial mesoderm | 2.23e-10 | 9 |
musculature of body | 2.11e-09 | 10 |
dense mesenchyme tissue | 1.33e-08 | 11 |
paraxial mesoderm | 1.33e-08 | 11 |
presumptive paraxial mesoderm | 1.33e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.12e-29 | 3 |
muscle cancer | 1.12e-29 | 3 |
organ system cancer | 3.13e-15 | 6 |