FFCP PHASE1:Hg19::chr7:138793082..138793121,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:138793082..138793121,+ | |||
|coexpression_cluster_id=C857 | |||
|description=CAGE_peak_at_chr7:138793082..138793121,+ | |||
|id=chr7:138793082..138793121,+ | |||
|ontology_enrichment_celltype=CL:0000945!4.07e-27!24;CL:0000826!4.07e-27!24;CL:0000236!7.85e-23!14;CL:0000542!3.51e-18!53;CL:0000051!3.51e-18!53;CL:0000838!6.27e-17!52;CL:0000738!6.48e-17!140;CL:0002087!8.19e-15!119;CL:0002031!6.87e-13!124;CL:0000037!5.55e-12!172;CL:0000566!5.55e-12!172;CL:0002032!6.40e-11!165;CL:0000837!6.40e-11!165;CL:0000988!1.27e-10!182;CL:0000817!7.74e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000236;4.81e-76;13!CL:0000945;2.25e-50;24!CL:0000542;9.22e-24;53!CL:0000785;3.98e-14;1!CL:0000819;3.98e-14;1!CL:0000817;1.10e-13;1!CL:0002087;8.84e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.15e-70,14;CL:0000945,2.38e-50,24;CL:0000826,2.38e-50,24;CL:0000542,5.11e-27,53;CL:0000051,5.11e-27,53;CL:0000838,1.10e-22,52;CL:0000817,1.28e-17,3;CL:0000819,4.53e-14,1;CL:0002087,5.84e-14,115;CL:0000738,1.38e-11,136;CL:0002031,4.53e-11,120;CL:0002032,1.48e-09,161;CL:0000837,1.48e-09,161;CL:0000037,4.28e-09,168;CL:0000988,1.49e-08,177;CL:0000785,1.12e-07,2;CL:0000955,1.12e-07,2;CL:0000818,1.12e-07,2;CL:0000954,1.12e-07,2;CL:0000816,1.12e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;9.22e-24;53!CL:0000954;1.05e-07;2!UBERON:0006965;1.75e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;3.98e-14;1!DOID:8675;3.98e-14;1!DOID:12603;5.14e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,4.53e-14,1;DOID:8675,4.53e-14,1;DOID:12603,5.15e-14,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.157421562627358,0.393364276848904,0,0.154816123316076,0,0,0,1.08454080812422,0.142169232487422,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0.398927315243264,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0,0,1.21079900526674,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0.889509253863555,0.426730222566507,3.60356388332411,1.72425731986345,0.661044872784862,1.90810750907073,3.98449078376614,1.17447437874188,1.14681968437569,0,0.560508562981536,1.31692042387539,0,0,0.205601498999509,0.501559486172034,0,0,0,0,0.883817722424512,0,0.812411591295047,0,0.130059347559878,0.328875809207352,0.552700035571697,0.579606171470105,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0.476463550915578,0.822724546172388,0,0,0,0.106824071127473,0,0,2.22963810150862,1.15415370381156,0.284567373393656,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,3.10173141666632,0,0,0,0,0,0,1.05226393590145,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0.0730893170861856,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,7.41300403011781,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0.335566295393377,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.563903507879121,0.966868319603658,0.499705779624645,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0.462175628631418,0,0,0,0.380095503034311,0.305966489225945,0.26721740526556,0.18378979906969,0.50141507858475,0,0,0,0,0,0,0.193766729508018,0.248298857183432,0,0.0636471582781649,0.202117188958219,0,0,0.875576689189638,0,0,0,0,0,0,0,0.855690109280065,0.406896178315738,0.665756774185513,1.20764276154616,0 | |||
|short_description=p@chr7:138793082..138793121,+ | |||
}} |
Latest revision as of 06:32, 31 July 2015
Short description: | p@chr7:138793082..138793121, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:138793082..138793121, + |
Coexpression cluster: | C857_non_lymphoma_CD19_acute_diffuse_Burkitt_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.15e-70 | 14 |
lymphocyte of B lineage | 2.38e-50 | 24 |
pro-B cell | 2.38e-50 | 24 |
lymphocyte | 5.11e-27 | 53 |
common lymphoid progenitor | 5.11e-27 | 53 |
lymphoid lineage restricted progenitor cell | 1.10e-22 | 52 |
precursor B cell | 1.28e-17 | 3 |
B-1 B cell | 4.53e-14 | 1 |
nongranular leukocyte | 5.84e-14 | 115 |
leukocyte | 1.38e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 4.53e-11 | 120 |
hematopoietic oligopotent progenitor cell | 1.48e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.48e-09 | 161 |
hematopoietic stem cell | 4.28e-09 | 168 |
hematopoietic cell | 1.49e-08 | 177 |
mature B cell | 1.12e-07 | 2 |
pre-B-II cell | 1.12e-07 | 2 |
transitional stage B cell | 1.12e-07 | 2 |
small pre-B-II cell | 1.12e-07 | 2 |
immature B cell | 1.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 4.53e-14 | 1 |
lymphosarcoma | 4.53e-14 | 1 |
acute leukemia | 5.15e-14 | 1 |