FFCP PHASE1:Mm9::chr10:128346685..128346692,+: Difference between revisions
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|id=chr10:128346685..128346692,+
|short_description=p6@Cd63,p6@LOC100505035
|description=CAGE_peak_6_at_Cd63_5end,CAGE_peak_6_at_LOC100505035_5end
|association_with...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=100505035,12512 | |EntrezGene=100505035,12512 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=P41731,Q549D0 | |UniProt=P41731,Q549D0 | ||
|association_with_transcript=-229bp_to_ENSMUST00000026407,NM_007653,uc007hov.1_5end | |||
|cluster_id=chr10:128346685..128346692,+ | |||
|description=CAGE_peak_6_at_Cd63_5end,CAGE_peak_6_at_LOC100505035_5end | |||
|id=chr10:128346685..128346692,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.49e-07!9;CL:0002251!3.49e-07!9;CL:0002076!5.39e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.85e-15,6;CL:0000677,6.85e-15,6;CL:0000584,6.85e-15,6;CL:0000075,1.01e-12,7;CL:0000682,2.33e-10,3;CL:0002563,7.93e-10,9;CL:0002251,7.93e-10,9;CL:0000066,9.89e-10,25;CL:0002076,5.47e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.90e-11!43;UBERON:0001242!2.64e-10!13;UBERON:0000060!2.64e-10!13;UBERON:0001262!2.64e-10!13;UBERON:0004786!2.64e-10!13;UBERON:0000344!7.78e-10!15;UBERON:0005409!3.34e-09!59;UBERON:0003350!3.49e-07!9;UBERON:0004808!3.49e-07!9;UBERON:0001277!3.49e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.18e-25,31;UBERON:0005409,5.70e-18,47;UBERON:0000344,1.17e-17,15;UBERON:0001242,1.20e-16,13;UBERON:0001262,1.20e-16,13;UBERON:0004786,1.20e-16,13;UBERON:0004923,1.85e-10,24;UBERON:0001007,4.30e-10,116;UBERON:0001555,4.30e-10,116;UBERON:0007026,4.30e-10,116;UBERON:0004119,7.53e-10,118;UBERON:0000925,7.53e-10,118;UBERON:0006595,7.53e-10,118;UBERON:0003350,7.93e-10,9;UBERON:0004808,7.93e-10,9;UBERON:0001277,7.93e-10,9;UBERON:0004921,2.99e-09,114;UBERON:0002108,1.80e-08,4;UBERON:0000485,5.58e-08,11;UBERON:0001155,1.68e-07,2;UBERON:0000059,1.68e-07,2 | |||
|phase1_expression=0,3.83872948403297,5.91499011206397,8.77146212789807,9.01612313903425,0.33575854382378,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.27993938234725,0,2.8711598205751,3.01533397311352,1.29282739611533,3.80046838912748,4.78857246543868,0.665191531965914,0,0,0,0.288851619751275,0.498703936075477,0.408338712524738,0.418531630736908,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0,0.441737081903227,0,0,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0.52091337055676,0,0.56276261003168,0,0.294628585473668,0.284743361598206,0.186399445825301,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0.519572009205738,0,0,0,2.54805239706646,0,0.216491041011214,0.253359865475099,0.505524445014783,0.79928715803342,0,0.148442139064825,0.173485326766136,0,0,0,0,0.251333182659351,0,0,0,0.161766849947409,0.220841518460394,0,3.72783522436244,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0.203678727700633,0,0.505445516867349,0,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,3.96502539580558,1.85115396664481,0,0,0,0,0.667134131534611,0.380451252225118,4.74529061544512,0.658795818896044,0.754005626400808,0.596869416123452,0.58489226135736,1.79763881730844,3.6743468478698,3.38540164532424,0,0,0,0,0,0.280543279561274,0.126473074248515,1.32849133181642,1.56998727841375,0.493588655687202,0,0,0,0,0,0,0,0,0.648540907100142,0.823684239564244,2.87536413054709,0.744281895337007,1.5601883655728,2.02063102357689,0.896987067609561,0.964887042726734,0,0.189491411770485,0,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0.485561272309963,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0.469343416127421,0,0.220528398054962,0,0.322928853391811,0.180938774784468,0.238744688006273,0,2.04036585640896,0.18542530201051,0,0,0,0.188368457004691,0,0,0.169978429993855,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0.269728692769641,0.495920734352016,0.785267825952089,1.68499465279331,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0.2604087696879,0.209718688851422,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0.237270036248348,0.29551344712669,0,0.154936841185966,0.385813221962283,0,0,0.214871054048298,0,0.441182838239031,0 | |phase1_expression=0,3.83872948403297,5.91499011206397,8.77146212789807,9.01612313903425,0.33575854382378,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.27993938234725,0,2.8711598205751,3.01533397311352,1.29282739611533,3.80046838912748,4.78857246543868,0.665191531965914,0,0,0,0.288851619751275,0.498703936075477,0.408338712524738,0.418531630736908,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0,0.441737081903227,0,0,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0.52091337055676,0,0.56276261003168,0,0.294628585473668,0.284743361598206,0.186399445825301,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0.519572009205738,0,0,0,2.54805239706646,0,0.216491041011214,0.253359865475099,0.505524445014783,0.79928715803342,0,0.148442139064825,0.173485326766136,0,0,0,0,0.251333182659351,0,0,0,0.161766849947409,0.220841518460394,0,3.72783522436244,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0.203678727700633,0,0.505445516867349,0,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,3.96502539580558,1.85115396664481,0,0,0,0,0.667134131534611,0.380451252225118,4.74529061544512,0.658795818896044,0.754005626400808,0.596869416123452,0.58489226135736,1.79763881730844,3.6743468478698,3.38540164532424,0,0,0,0,0,0.280543279561274,0.126473074248515,1.32849133181642,1.56998727841375,0.493588655687202,0,0,0,0,0,0,0,0,0.648540907100142,0.823684239564244,2.87536413054709,0.744281895337007,1.5601883655728,2.02063102357689,0.896987067609561,0.964887042726734,0,0.189491411770485,0,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0.485561272309963,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0.469343416127421,0,0.220528398054962,0,0.322928853391811,0.180938774784468,0.238744688006273,0,2.04036585640896,0.18542530201051,0,0,0,0.188368457004691,0,0,0.169978429993855,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0.269728692769641,0.495920734352016,0.785267825952089,1.68499465279331,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0.2604087696879,0.209718688851422,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0.237270036248348,0.29551344712669,0,0.154936841185966,0.385813221962283,0,0,0.214871054048298,0,0.441182838239031,0 | ||
|short_description=p6@Cd63,p6@LOC100505035 | |||
}} | }} |
Latest revision as of 19:30, 25 September 2015
Short description: | p6@Cd63, p6@LOC100505035 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Cd63_5end, CAGE_peak_6_at_LOC100505035_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -229bp_to_ENSMUST00000026407, NM_007653, uc007hov.1_5end |
EntrezGene: | 100505035,12512 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.85e-15 | 6 |
gut absorptive cell | 6.85e-15 | 6 |
enterocyte | 6.85e-15 | 6 |
columnar/cuboidal epithelial cell | 1.01e-12 | 7 |
M cell of gut | 2.33e-10 | 3 |
intestinal epithelial cell | 7.93e-10 | 9 |
epithelial cell of alimentary canal | 7.93e-10 | 9 |
epithelial cell | 9.89e-10 | 25 |
endo-epithelial cell | 5.47e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.18e-25 | 31 |
gastrointestinal system | 5.70e-18 | 47 |
mucosa | 1.17e-17 | 15 |
intestinal mucosa | 1.20e-16 | 13 |
wall of intestine | 1.20e-16 | 13 |
gastrointestinal system mucosa | 1.20e-16 | 13 |
organ component layer | 1.85e-10 | 24 |
digestive system | 4.30e-10 | 116 |
digestive tract | 4.30e-10 | 116 |
primitive gut | 4.30e-10 | 116 |
endoderm-derived structure | 7.53e-10 | 118 |
endoderm | 7.53e-10 | 118 |
presumptive endoderm | 7.53e-10 | 118 |
epithelium of mucosa | 7.93e-10 | 9 |
gastrointestinal system epithelium | 7.93e-10 | 9 |
intestinal epithelium | 7.93e-10 | 9 |
subdivision of digestive tract | 2.99e-09 | 114 |
small intestine | 1.80e-08 | 4 |
simple columnar epithelium | 5.58e-08 | 11 |
colon | 1.68e-07 | 2 |
large intestine | 1.68e-07 | 2 |