FFCP PHASE1:Mm9::chr10:18189709..18189716,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:18189709..18189716,+
|short_description=p5@Nhsl1
|description=CAGE_peak_5_at_Nhsl1_5end
|association_with_transcript=15bp_to_ENSMUST00000160547_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=215819 | |EntrezGene=215819 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_ENSMUST00000160547_5end | |||
|cluster_id=chr10:18189709..18189716,+ | |||
|description=CAGE_peak_5_at_Nhsl1_5end | |||
|id=chr10:18189709..18189716,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.41e-07!9;CL:0002251!2.41e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.01e-09,6;CL:0000677,1.01e-09,6;CL:0000584,1.01e-09,6;CL:0002563,8.82e-09,9;CL:0002251,8.82e-09,9;CL:0000075,2.74e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.01e-13!43;UBERON:0003135!1.05e-12!15;UBERON:0000344!4.23e-12!15;UBERON:0000473!4.38e-12!14;UBERON:0003101!1.57e-11!16;UBERON:0000079!1.57e-11!16;UBERON:0001242!1.43e-10!13;UBERON:0000060!1.43e-10!13;UBERON:0001262!1.43e-10!13;UBERON:0004786!1.43e-10!13;UBERON:0000991!1.22e-09!18;UBERON:0005564!1.22e-09!18;UBERON:0005409!1.45e-09!59;UBERON:0004176!5.50e-09!17;UBERON:0009196!5.50e-09!17;UBERON:0009117!5.50e-09!17;UBERON:0003133!1.57e-08!24;UBERON:0005156!2.14e-07!26;UBERON:0000990!2.14e-07!26;UBERON:0003350!2.41e-07!9;UBERON:0004808!2.41e-07!9;UBERON:0001277!2.41e-07!9;UBERON:0000485!7.49e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.19e-34,31;UBERON:0005409,1.37e-20,47;UBERON:0000344,2.92e-20,15;UBERON:0000473,1.09e-16,14;UBERON:0001242,1.92e-16,13;UBERON:0001262,1.92e-16,13;UBERON:0004786,1.92e-16,13;UBERON:0003135,1.94e-15,15;UBERON:0003101,2.41e-14,16;UBERON:0000079,2.41e-14,16;UBERON:0004176,2.22e-13,17;UBERON:0009196,2.22e-13,17;UBERON:0009117,2.22e-13,17;UBERON:0000991,1.60e-12,18;UBERON:0005564,1.60e-12,18;UBERON:0004923,9.93e-12,24;UBERON:0002108,7.01e-10,4;UBERON:0003133,6.89e-09,24;UBERON:0003350,8.82e-09,9;UBERON:0004808,8.82e-09,9;UBERON:0001277,8.82e-09,9;UBERON:0005156,4.72e-08,26;UBERON:0000990,4.72e-08,26;UBERON:0000331,1.38e-07,3;UBERON:0002116,1.38e-07,3;UBERON:0001204,1.38e-07,3;UBERON:0001168,1.38e-07,3;UBERON:0000485,4.52e-07,11;UBERON:0001007,7.00e-07,116;UBERON:0001555,7.00e-07,116;UBERON:0007026,7.00e-07,116 | |||
|phase1_expression=0,1.04692622291808,1.81999695755814,1.20985684522732,1.50268718983904,0.33575854382378,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,1.43993180514066,1.14704640533585,1.14846392823004,1.29228598847722,0.430942465371778,2.66032787238923,1.00812051903972,1.10865255327652,0,0,0,0.288851619751275,0.664938581433969,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0.336093799142464,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0.135005938331691,0,0,0,0.367472397644862,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0.52091337055676,0,0,0,0.589257170947335,0,0.745597783301202,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,1.86391761218122,0,0.209446706813455,2.29911349687732,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0.407357455401265,0.248813941220186,0.758168275301024,0,0.130120442962704,0,0.540186389416048,0.60281927134286,0.272145996605311,0.384341160854549,0.0937017245597288,0.258703370739016,0.215567992932842,0.189106080167819,0,0,0,0.696504333044333,0,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,2.64335026387038,2.11560453330835,0,0,0.77320476793256,0.605050573870028,0.22237804384487,0.570676878337677,1.42358718463353,1.15289268306808,3.01602250560323,1.1937388322469,1.55971269695296,1.79763881730844,1.51296634912286,2.38969527905241,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0.189709611372772,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983528546038072,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0.643011105094777,0,0.178368817602071,0.164549020602121,0,0,0,0,2.14352128823924,0.484393280087717,0.422190474497091,0.716234064018819,0.164140899745061,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0,0,0.165306911450672,0,0.90730481304255,0,1.12738587736838,2.8408143748356,0.992750942742586,0.972255941720238,1.42075805825504,1.520605129417,2.22978753426933,2.99470085141085,3.77493639932559,1.44950472495604,1.15212002503146,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.179427713218951,0,0,0.187682475451182,0.183151624267265,0,3.00943262421218,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0,0,0.256100609619477,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0.118635018124174,0.29551344712669,0,0,0.385813221962283,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,1.04692622291808,1.81999695755814,1.20985684522732,1.50268718983904,0.33575854382378,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,1.43993180514066,1.14704640533585,1.14846392823004,1.29228598847722,0.430942465371778,2.66032787238923,1.00812051903972,1.10865255327652,0,0,0,0.288851619751275,0.664938581433969,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0.336093799142464,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0.135005938331691,0,0,0,0.367472397644862,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0.52091337055676,0,0,0,0.589257170947335,0,0.745597783301202,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,1.86391761218122,0,0.209446706813455,2.29911349687732,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0.407357455401265,0.248813941220186,0.758168275301024,0,0.130120442962704,0,0.540186389416048,0.60281927134286,0.272145996605311,0.384341160854549,0.0937017245597288,0.258703370739016,0.215567992932842,0.189106080167819,0,0,0,0.696504333044333,0,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,2.64335026387038,2.11560453330835,0,0,0.77320476793256,0.605050573870028,0.22237804384487,0.570676878337677,1.42358718463353,1.15289268306808,3.01602250560323,1.1937388322469,1.55971269695296,1.79763881730844,1.51296634912286,2.38969527905241,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0.189709611372772,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983528546038072,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0.643011105094777,0,0.178368817602071,0.164549020602121,0,0,0,0,2.14352128823924,0.484393280087717,0.422190474497091,0.716234064018819,0.164140899745061,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0,0,0.165306911450672,0,0.90730481304255,0,1.12738587736838,2.8408143748356,0.992750942742586,0.972255941720238,1.42075805825504,1.520605129417,2.22978753426933,2.99470085141085,3.77493639932559,1.44950472495604,1.15212002503146,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.179427713218951,0,0,0.187682475451182,0.183151624267265,0,3.00943262421218,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0,0,0.256100609619477,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0.118635018124174,0.29551344712669,0,0,0.385813221962283,0,0.233931608445408,0,0,0,0 | ||
|short_description=p5@Nhsl1 | |||
}} | }} |
Latest revision as of 20:17, 25 September 2015
Short description: | p5@Nhsl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Nhsl1_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENSMUST00000160547_5end |
EntrezGene: | Nhsl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.01e-09 | 6 |
gut absorptive cell | 1.01e-09 | 6 |
enterocyte | 1.01e-09 | 6 |
intestinal epithelial cell | 8.82e-09 | 9 |
epithelial cell of alimentary canal | 8.82e-09 | 9 |
columnar/cuboidal epithelial cell | 2.74e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.19e-34 | 31 |
gastrointestinal system | 1.37e-20 | 47 |
mucosa | 2.92e-20 | 15 |
testis | 1.09e-16 | 14 |
intestinal mucosa | 1.92e-16 | 13 |
wall of intestine | 1.92e-16 | 13 |
gastrointestinal system mucosa | 1.92e-16 | 13 |
male reproductive organ | 1.94e-15 | 15 |
male organism | 2.41e-14 | 16 |
male reproductive system | 2.41e-14 | 16 |
external genitalia | 2.22e-13 | 17 |
indifferent external genitalia | 2.22e-13 | 17 |
indifferent gonad | 2.22e-13 | 17 |
gonad | 1.60e-12 | 18 |
gonad primordium | 1.60e-12 | 18 |
organ component layer | 9.93e-12 | 24 |
small intestine | 7.01e-10 | 4 |
reproductive organ | 6.89e-09 | 24 |
epithelium of mucosa | 8.82e-09 | 9 |
gastrointestinal system epithelium | 8.82e-09 | 9 |
intestinal epithelium | 8.82e-09 | 9 |
reproductive structure | 4.72e-08 | 26 |
reproductive system | 4.72e-08 | 26 |
ileal mucosa | 1.38e-07 | 3 |
ileum | 1.38e-07 | 3 |
mucosa of small intestine | 1.38e-07 | 3 |
wall of small intestine | 1.38e-07 | 3 |
simple columnar epithelium | 4.52e-07 | 11 |
digestive system | 7.00e-07 | 116 |
digestive tract | 7.00e-07 | 116 |
primitive gut | 7.00e-07 | 116 |