FFCP PHASE1:Hg19::chr7:2701540..2701595,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80727 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=22222 | |||
|TSSclassifier=strong | |||
|UniProt=Q69YH1 | |||
|association_with_transcript=220bp_to_AL833825_5end | |||
|cluster_id=chr7:2701540..2701595,+ | |||
|coexpression_cluster_id=C716 | |||
|description=CAGE_peak_6_at_TTYH3_5end | |||
|id=chr7:2701540..2701595,+ | |||
|ontology_enrichment_celltype=CL:0000144!4.00e-13!625;CL:0002321!1.52e-12!248;CL:0000220!1.66e-12!246;CL:0002371!1.74e-11!591;CL:0000055!3.45e-11!180;CL:0000222!3.80e-11!119;CL:0000213!1.16e-10!57;CL:0000215!1.16e-10!57;CL:0000115!1.61e-10!35;CL:0000548!8.70e-10!679;CL:0000004!8.70e-10!679;CL:0000255!8.70e-10!679;CL:0000012!5.34e-09!682;CL:0002078!1.93e-08!44;CL:0000221!6.33e-07!71;CL:0000133!6.74e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000115;4.78e-11;36!CL:1000497;8.70e-08;17!CL:0002518;8.70e-08;17!CL:1000449;2.73e-07;15!CL:0002681;8.06e-07;12!CL:0002584;8.06e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.65e-12,36;CL:0000222,3.68e-12,121;CL:0000213,2.41e-11,58;CL:0000215,2.41e-11,58;CL:0002321,9.07e-11,250;CL:0002078,1.75e-09,45;CL:1000497,1.97e-07,17;CL:0002518,1.97e-07,17;CL:1000449,4.44e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.70e-11!659;UBERON:0000467!6.31e-10!625;UBERON:0000480!1.14e-09!626;UBERON:0000922!3.09e-09!612;UBERON:0002050!6.99e-09!605;UBERON:0005423!6.99e-09!605;UBERON:0003081!7.68e-09!216;UBERON:0000923!8.10e-09!604;UBERON:0005291!8.10e-09!604;UBERON:0006598!8.10e-09!604;UBERON:0002532!8.10e-09!604;UBERON:0002049!5.33e-08!79;UBERON:0007798!5.33e-08!79;UBERON:0000055!3.79e-07!69;UBERON:0003914!4.01e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;1.50e-07;15!UBERON:0006555;2.73e-07;15!UBERON:0004819;2.73e-07;15!UBERON:0001285;2.73e-07;15!UBERON:0007684;2.73e-07;15!UBERON:0001225;8.06e-07;12!UBERON:0008987;8.06e-07;12!UBERON:0003914;9.29e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,5.45e-11,203;UBERON:0000926,8.31e-10,315;UBERON:0004120,8.31e-10,315;UBERON:0006603,8.31e-10,315;UBERON:0002049,1.32e-09,78;UBERON:0007798,1.32e-09,78;UBERON:0003914,7.99e-09,117;UBERON:0000055,3.58e-08,68;UBERON:0001637,2.11e-07,42;UBERON:0003509,2.11e-07,42;UBERON:0004572,2.11e-07,42;UBERON:0000353,2.19e-07,15;UBERON:0004211,4.44e-07,15;UBERON:0009773,4.44e-07,15;UBERON:0001231,4.44e-07,15;UBERON:0001285,4.44e-07,15;UBERON:0007684,4.44e-07,15;UBERON:0004208,4.44e-07,15;UBERON:0007500,6.86e-07,59;UBERON:0001981,6.86e-07,59;UBERON:0004537,6.86e-07,59;UBERON:0006965,6.86e-07,59 | |||
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| |||
|short_description=p6@TTYH3 | |||
}} |
Latest revision as of 00:41, 18 September 2015
Short description: | p6@TTYH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TTYH3_5end |
Coexpression cluster: | C716_Melanocyte_Monocytederived_melanoma_Macrophage_Renal_CD14_Dendritic |
Association with transcript: | 220bp_to_AL833825_5end |
EntrezGene: | TTYH3 |
HGNC: | 22222 |
UniProt: | Q69YH1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.65e-12 | 36 |
mesodermal cell | 3.68e-12 | 121 |
lining cell | 2.41e-11 | 58 |
barrier cell | 2.41e-11 | 58 |
embryonic cell | 9.07e-11 | 250 |
meso-epithelial cell | 1.75e-09 | 45 |
kidney cell | 1.97e-07 | 17 |
kidney epithelial cell | 1.97e-07 | 17 |
epithelial cell of nephron | 4.44e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 5.45e-11 | 203 |
mesoderm | 8.31e-10 | 315 |
mesoderm-derived structure | 8.31e-10 | 315 |
presumptive mesoderm | 8.31e-10 | 315 |
vasculature | 1.32e-09 | 78 |
vascular system | 1.32e-09 | 78 |
epithelial tube | 7.99e-09 | 117 |
vessel | 3.58e-08 | 68 |
artery | 2.11e-07 | 42 |
arterial blood vessel | 2.11e-07 | 42 |
arterial system | 2.11e-07 | 42 |
parenchyma | 2.19e-07 | 15 |
nephron epithelium | 4.44e-07 | 15 |
renal tubule | 4.44e-07 | 15 |
nephron tubule | 4.44e-07 | 15 |
nephron | 4.44e-07 | 15 |
uriniferous tubule | 4.44e-07 | 15 |
nephrogenic mesenchyme | 4.44e-07 | 15 |
epithelial tube open at both ends | 6.86e-07 | 59 |
blood vessel | 6.86e-07 | 59 |
blood vasculature | 6.86e-07 | 59 |
vascular cord | 6.86e-07 | 59 |