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FFCP PHASE1:Mm9::chr3:108003725..108003776,-: Difference between revisions

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{{FFCP|EntrezGene=72023|HGNC=|MCL_coexpression_id=36|UniProt=Q3TPE5,A2AE42,Q6PAS2|association_with_transcript=0bp_to_ENSMUST00000065664,ENSMUST00000106655,NM_001081320,NM_028061,uc008qyj.1,uc008qyk.1,uc012cwc.1_5end|description=CAGE_peak_1_at_Cyb561d1_5end|id=chr3:108003725..108003776,-|ontology_enrichment_celltype=CL:0002031!7.82e-07!25|ontology_enrichment_celltype_v019_2=CL:0002031,6.58e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.76e-11!51;UBERON:0000064!1.47e-10!99;UBERON:0004119!3.18e-09!130;UBERON:0000925!3.18e-09!130;UBERON:0006595!3.18e-09!130;UBERON:0001007!4.97e-09!128;UBERON:0001555!4.97e-09!128;UBERON:0007026!4.97e-09!128;UBERON:0002193!1.22e-08!48;UBERON:0004921!1.68e-08!126;UBERON:0004185!1.68e-08!126;UBERON:0002390!8.61e-08!45;UBERON:0003061!8.61e-08!45;UBERON:0000481!9.87e-07!230|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.63e-11,51;UBERON:0004119,3.61e-10,118;UBERON:0000925,3.61e-10,118;UBERON:0006595,3.61e-10,118;UBERON:0001007,5.62e-10,116;UBERON:0001555,5.62e-10,116;UBERON:0007026,5.62e-10,116;UBERON:0004921,2.03e-09,114;UBERON:0002193,1.21e-08,48;UBERON:0002405,1.21e-08,48;UBERON:0002390,8.51e-08,45;UBERON:0003061,8.51e-08,45;UBERON:0000077,7.34e-07,35|phase1_expression=2.24208385946712,4.88565570695105,4.54999239389536,7.25914107136392,5.50985302940982,4.70061961353291,2.56973904655078,18.9811285459117,6.89864738543167,3.97909694747389,7.53359060192222,8.29630453551499,23.7969014604376,19.7570109466934,6.32908547449759,5.4668322195253,9.09430441566591,15.4576461025536,19.8815928728321,14.429248161133,3.656861476496,4.17021995043718,4.17919662622297,6.55968933452967,6.8822784320151,10.9104073181854,3.01533397311352,3.23206849028834,7.9809836171677,6.5527833737582,6.87364583031445,2.54012269383853,6.1506478758457,0,4.04392267651784,3.65716219788683,4.28755648150975,24.2748345827406,13.2827008569046,17.2762835511353,34.7056577938298,21.8574555186703,33.0147040061184,2.14024590558481,1.01376931219515,1.10128051297009,3.9119567217402,3.2703773457067,2.63623419281366,6.80504646759992,2.37976916763116,1.43752564364972,12.2481302422148,13.7818806982155,4.36921938885203,1.54355661621568,3.15186783932632,2.06268836910977,1.61853168687678,1.05798195854407,1.90149421051854,2.03306719241479,2.66788438833342,5.84934816232909,2.96659908770092,7.8152812644071,4.19440154725767,2.30530983192933,0.933206510776299,1.35005938331691,0.841299845405528,1.42825492201902,2.42955395046775,1.34739879136449,2.20444583341944,0,7.70811166995721,4.08599481872601,5.22262213071228,0.791317726381163,1.55528994124096,1.56274011167028,5.862842979029,4.50210088025344,4.43114918552749,1.76777151284201,0.711858403995515,0.559198337475902,3.40767869999328,3.02286240427142,4.92769630792852,3.44169550792555,4.75979933595425,4.31762553310254,3.24888208723835,0.896053774194671,4.63466586434781,1.70430322578058,1.29893002301434,0.70667914902068,2.67602497575693,1.28326477414318,2.54805239706646,14.2213340630666,4.32982082022428,2.53359865475099,2.02209778005913,5.02409070763864,6.73238497482646,3.71105347662062,1.38788261412909,2.43572382649713,2.30615497256059,3.01445281105245,2.58695155698551,2.13633205260448,1.73036477414062,4.19338135067744,4.42305275974937,2.26473589926373,4.19598885074748,4.84875253135222,11.1835056730873,4.68449275218475,6.91174132484402,7.91916871146633,3.95389910869537,2.39961092397363,5.33694953706872,4.19413790333504,10.980014467647,1.88481528169297,8.8650403298061,9.2057564638919,3.53239675751252,5.51620294430376,1.93494791315601,3.85661608891288,7.58168275301024,9.25944165900485,0.650602214813519,1.37941262660084,1.62055916824814,1.80845781402858,2.51735046859913,2.17793324484245,3.65436725782942,6.46758426847539,0.215567992932842,0.567318240503458,0.527853372491847,1.09597866213787,1.66828349535359,2.78601733217733,3.08673204611915,0.796137067273973,1.40442637462647,3.08817488537658,2.27330799516474,1.03562886267751,1.87620847984877,1.80062061461015,1.42046841351126,1.77087808572663,2.00547246753592,2.32533944750408,2.68273401399619,3.50296027101508,2.30383789878873,2.62667942526552,3.97237166774693,4.09359964790931,3.95190207523891,3.48936688776967,5.46753866266731,1.74937841044784,15.8601015832223,5.81791246659797,0.853153002140936,1.16118335930219,1.54640953586512,2.01683524623343,1.33426826306922,5.1360919050391,7.11793592316767,7.24675400785648,6.78605063760728,7.16243299348143,8.38345574612217,7.19055526923377,9.07779809473716,8.56307474993779,2.0863469104839,1.5994791765362,2.25415471346161,1.4255592949172,2.90928730751439,2.38461787627083,3.35153646758564,2.80459281161244,2.98297582898612,4.19550357334122,3.26097889795864,3.17005700860579,0.982794975566015,2.02375901146368,3.04290182082754,3.13530307678142,3.31013607315846,2.5892652370573,2.7562988551756,2.47105271869273,1.43768206527355,2.60498663367952,3.74445207737473,4.04126204715379,2.87035861635059,2.8946611281802,10.1614254591633,0.757965647081939,0.651859905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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=72023
|HGNC=
|MCL_coexpression_id=36
|TSSclassifier=NA
|UniProt=Q3TPE5,A2AE42,Q6PAS2
|association_with_transcript=0bp_to_ENSMUST00000065664,ENSMUST00000106655,NM_001081320,NM_028061,uc008qyj.1,uc008qyk.1,uc012cwc.1_5end
|cluster_id=chr3:108003725..108003776,-
|description=CAGE_peak_1_at_Cyb561d1_5end
|id=chr3:108003725..108003776,-
|ontology_enrichment_celltype=CL:0002031!7.82e-07!25
|ontology_enrichment_celltype_v019_2=CL:0002031,6.58e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!1.76e-11!51;UBERON:0000064!1.47e-10!99;UBERON:0004119!3.18e-09!130;UBERON:0000925!3.18e-09!130;UBERON:0006595!3.18e-09!130;UBERON:0001007!4.97e-09!128;UBERON:0001555!4.97e-09!128;UBERON:0007026!4.97e-09!128;UBERON:0002193!1.22e-08!48;UBERON:0004921!1.68e-08!126;UBERON:0004185!1.68e-08!126;UBERON:0002390!8.61e-08!45;UBERON:0003061!8.61e-08!45;UBERON:0000481!9.87e-07!230
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.63e-11,51;UBERON:0004119,3.61e-10,118;UBERON:0000925,3.61e-10,118;UBERON:0006595,3.61e-10,118;UBERON:0001007,5.62e-10,116;UBERON:0001555,5.62e-10,116;UBERON:0007026,5.62e-10,116;UBERON:0004921,2.03e-09,114;UBERON:0002193,1.21e-08,48;UBERON:0002405,1.21e-08,48;UBERON:0002390,8.51e-08,45;UBERON:0003061,8.51e-08,45;UBERON:0000077,7.34e-07,35
|phase1_expression=2.24208385946712,4.88565570695105,4.54999239389536,7.25914107136392,5.50985302940982,4.70061961353291,2.56973904655078,18.9811285459117,6.89864738543167,3.97909694747389,7.53359060192222,8.29630453551499,23.7969014604376,19.7570109466934,6.32908547449759,5.4668322195253,9.09430441566591,15.4576461025536,19.8815928728321,14.429248161133,3.656861476496,4.17021995043718,4.17919662622297,6.55968933452967,6.8822784320151,10.9104073181854,3.01533397311352,3.23206849028834,7.9809836171677,6.5527833737582,6.87364583031445,2.54012269383853,6.1506478758457,0,4.04392267651784,3.65716219788683,4.28755648150975,24.2748345827406,13.2827008569046,17.2762835511353,34.7056577938298,21.8574555186703,33.0147040061184,2.14024590558481,1.01376931219515,1.10128051297009,3.9119567217402,3.2703773457067,2.63623419281366,6.80504646759992,2.37976916763116,1.43752564364972,12.2481302422148,13.7818806982155,4.36921938885203,1.54355661621568,3.15186783932632,2.06268836910977,1.61853168687678,1.05798195854407,1.90149421051854,2.03306719241479,2.66788438833342,5.84934816232909,2.96659908770092,7.8152812644071,4.19440154725767,2.30530983192933,0.933206510776299,1.35005938331691,0.841299845405528,1.42825492201902,2.42955395046775,1.34739879136449,2.20444583341944,0,7.70811166995721,4.08599481872601,5.22262213071228,0.791317726381163,1.55528994124096,1.56274011167028,5.862842979029,4.50210088025344,4.43114918552749,1.76777151284201,0.711858403995515,0.559198337475902,3.40767869999328,3.02286240427142,4.92769630792852,3.44169550792555,4.75979933595425,4.31762553310254,3.24888208723835,0.896053774194671,4.63466586434781,1.70430322578058,1.29893002301434,0.70667914902068,2.67602497575693,1.28326477414318,2.54805239706646,14.2213340630666,4.32982082022428,2.53359865475099,2.02209778005913,5.02409070763864,6.73238497482646,3.71105347662062,1.38788261412909,2.43572382649713,2.30615497256059,3.01445281105245,2.58695155698551,2.13633205260448,1.73036477414062,4.19338135067744,4.42305275974937,2.26473589926373,4.19598885074748,4.84875253135222,11.1835056730873,4.68449275218475,6.91174132484402,7.91916871146633,3.95389910869537,2.39961092397363,5.33694953706872,4.19413790333504,10.980014467647,1.88481528169297,8.8650403298061,9.2057564638919,3.53239675751252,5.51620294430376,1.93494791315601,3.85661608891288,7.58168275301024,9.25944165900485,0.650602214813519,1.37941262660084,1.62055916824814,1.80845781402858,2.51735046859913,2.17793324484245,3.65436725782942,6.46758426847539,0.215567992932842,0.567318240503458,0.527853372491847,1.09597866213787,1.66828349535359,2.78601733217733,3.08673204611915,0.796137067273973,1.40442637462647,3.08817488537658,2.27330799516474,1.03562886267751,1.87620847984877,1.80062061461015,1.42046841351126,1.77087808572663,2.00547246753592,2.32533944750408,2.68273401399619,3.50296027101508,2.30383789878873,2.62667942526552,3.97237166774693,4.09359964790931,3.95190207523891,3.48936688776967,5.46753866266731,1.74937841044784,15.8601015832223,5.81791246659797,0.853153002140936,1.16118335930219,1.54640953586512,2.01683524623343,1.33426826306922,5.1360919050391,7.11793592316767,7.24675400785648,6.78605063760728,7.16243299348143,8.38345574612217,7.19055526923377,9.07779809473716,8.56307474993779,2.0863469104839,1.5994791765362,2.25415471346161,1.4255592949172,2.90928730751439,2.38461787627083,3.35153646758564,2.80459281161244,2.98297582898612,4.19550357334122,3.26097889795864,3.17005700860579,0.982794975566015,2.02375901146368,3.04290182082754,3.13530307678142,3.31013607315846,2.5892652370573,2.7562988551756,2.47105271869273,1.43768206527355,2.60498663367952,3.74445207737473,4.04126204715379,2.87035861635059,2.8946611281802,10.1614254591633,0.757965647081939,0.651859905768103,1.18821560042632,1.87752198630802,3.1826188913945,4.52282917683426,4.87834119644497,5.35959489961049,6.86540537911202,4.46473352240964,7.70157579163969,6.56202931090403,7.95569822198314,9.04747703635634,5.4390568381871,4.91764273019036,4.96686143348518,6.74312477948726,5.86058432961016,0.983609672260053,4.03953483526997,0.315508219416257,0.390438744296638,1.29254038639679,2.15071918157297,1.11399337041197,1.41538265394416,0.809621403349789,1.16902343164525,1.58115111178609,5.46246237917072,2.98074178937364,1.06839362200353,0.977321756121456,3.62934270539578,5.30980553359851,1.69946445308487,3.62788268357701,1.69744571780308,2.65771703592696,2.15204603560749,3.35956781118687,3.99887102425256,2.49548164869305,2.84433082142234,3.16255825724996,2.06271086496374,7.48967132658334,1.98067203434441,2.58717367565509,3.00071849044229,2.6601035046341,1.60531935841864,2.46823530903181,2.74018454203139,3.28540391289194,5.08396970073168,11.688005096913,9.23363016472288,5.9741837877485,4.34253059482722,7.16234064018819,8.042904087508,8.16146342563582,2.59595422814714,7.51831875510552,2.88941615148511,2.77791791054568,4.33247451110789,4.78429797023588,7.77845788902177,3.56954702987096,4.47844647435706,5.66619892598138,6.68269432610579,0.949007980743406,2.03319467126849,3.13215488383224,2.92723614420256,2.83871332870031,5.93403124093211,7.02554373665355,10.9937495633292,10.2395828900516,10.5627683224777,0.56369293868419,0.747582730219894,0.992750942742586,0.972255941720238,0.774958940866387,1.01373675294467,0.58678619322877,1.5624526181274,3.14578033277133,1.44950472495604,2.01621004380506,11.6924114632426,1.82452693761148,3.28675062927447,3.37794139742267,3.58053391334963,5.96044064343795,5.64918612743854,4.43068581523732,5.85605409699256,6.32516495236499,7.86444244067356,7.40679893622118,8.178006539428,8.06450625052826,7.70883304291719,0.443971906748129,0.448569283047378,0.503653849092235,5.02292944483695,4.69206188627955,4.02933573387983,7.5028932677673,9.02829787263654,6.7770221114048,8.28585425712918,4.58316410751517,4.29632955859219,6.85082519770642,9.06472676867641,4.05013500139084,4.95353323546643,6.79713613476307,7.7664046762773,0.415149390336707,1.99512436700516,2.56100408631201,1.21553358534147,1.04806581313991,1.65459157605013,1.33348036680969,1.64828045791115,1.28367683836726,1.76888048234658,2.5347929989024,2.07488975524684,2.06011316433741,1.85672941974121,1.89537047553524,0.952587382566147,1.85414921511769,2.31491064556446,2.88460130562315,1.32479028120958,1.71434626192708,2.8396128985494,0.953744759789284,1.45346416632329,1.50575008664529,1.60767754994185,2.74391959309159,0.526139422875686,1.35804113845862,1.68342681497322,1.66089025373844,1.87158516513571,2.45538625901814,1.39443157067369,2.70069255373598,1.24905288968973,2.8071793013449,3.86767897286937,2.67803664896381,1.98532277207564,4.40548887678801
|short_description=p1@Cyb561d1
}}

Latest revision as of 07:26, 27 September 2015

Short description:p1@Cyb561d1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cyb561d1_5end
Coexpression cluster:MCL_coexpression_mm9:36
Association with transcript: 0bp_to_ENSMUST00000065664, ENSMUST00000106655, NM_001081320, NM_028061, uc008qyj.1, uc008qyk.1, uc012cwc.1_5end
EntrezGene:Cyb561d1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cyb561d1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.26
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.70
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E918.98
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.53
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.30
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E423.80
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E819.76
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.47
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A215.46
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A419.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.43
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.18
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.88
GP2+ M cell, pool1.CNhs13228.11845-124H910.91
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B97.98
Ileum epithelium, pool2.CNhs13232.10253-104C16.55
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G824.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H113.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H317.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G934.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H221.86
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H433.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.81
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.25
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.78
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D93.41
Mouse Schwann, donor2.CNhs12573.11746-123F93.02
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.02
accessory axillary lymph node, adult.CNhs10475.1063-29H96.73
adrenal gland, adult.CNhs10508.49-24D73.71
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F53.01
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H14.19
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A64.20
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I26.91
colon, adult.CNhs10468.36-18H77.92
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.34
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D810.98
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D58.87
cortex, neonate N30.CNhs11107.1392-42F29.21
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B25.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.86
epididymis, adult.CNhs10490.58-23B27.58
eyeball, adult.CNhs10484.31-12G49.26
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C62.52
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G83.65
eyeball, neonate N16.CNhs11188.777-19A26.47
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E33.50
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G12.63
heart, neonate N16.CNhs11209.782-15G13.97
heart, neonate N20.CNhs11127.821-26I64.09
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D23.49
hippocampus, adult.CNhs10478.13-16E85.47
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I315.86
intestine, adult.CNhs10496.178-9A35.82
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F75.14
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E97.25
intestine, neonate N06.CNhs11102.688-20B86.79
intestine, neonate N07.CNhs11095.720-20F27.16
intestine, neonate N10.CNhs11098.755-23A58.38
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E39.08
intestine, neonate N30.CNhs11131.1384-42G18.56
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C72.91
kidney, neonate N00.CNhs11214.646-21G72.38
kidney, neonate N10.CNhs11206.758-6D53.35
kidney, neonate N20.CNhs11113.832-19I12.80
kidney, neonate N25.CNhs11122.1353-25F32.98
kidney, neonate N30.CNhs11203.1385-42H14.20
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F53.14
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B110.16
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A63.18
lung, embryo E18.CNhs10583.1287-20I64.52
lung, neonate N00.CNhs11224.640-42C64.88
lung, neonate N06.CNhs11212.683-20E55.36
lung, neonate N07.CNhs11111.715-19A36.87
lung, neonate N10.CNhs11219.750-23E64.46
lung, neonate N20.CNhs11109.822-18A47.70
lung, neonate N25.CNhs11119.1359-25C76.56
lung, neonate N30.CNhs11133.1394-42H27.96
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.44
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H24.97
medulla oblongata, adult.CNhs10477.17-12C26.74
medulla oblongata, neonate N30.CNhs11200.1396-42A35.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.04
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G87.49
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G35.08
prostate, adult.CNhs10470.859-1F811.69
skin, adult.CNhs10492.30-1C39.23
skin, neonate N00.CNhs11124.650-25G45.97
skin, neonate N03.CNhs11215.662-22H34.34
skin, neonate N06.CNhs11097.693-20I57.16
skin, neonate N10.CNhs11108.762-6C48.04
small intestine, neonate N16.CNhs11114.790-21I18.16
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G27.52
spleen, embryo E16.CNhs11035.461-43C12.89
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D14.33
spleen, neonate N20.CNhs11112.824-19H14.78
spleen, neonate N25.CNhs11099.1354-25G37.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.67
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D43.13
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B85.93
stomach, neonate N07.CNhs11210.718-18A97.03
stomach, neonate N25.CNhs11104.1355-25E410.99
stomach, neonate N30.CNhs11134.1386-42I110.24
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D93.15
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B511.69
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I23.29
thymus, embryo E16.CNhs11002.456-26C53.38
thymus, embryo E17.CNhs10581.478-18C13.58
thymus, embryo E18.CNhs10595.1273-19G45.96
thymus, neonate N02.CNhs11181.1541-43F85.65
thymus, neonate N03.CNhs11137.2104-43C74.43
thymus, neonate N06.CNhs11197.681-26C45.86
thymus, neonate N07.CNhs11211.713-19D36.33
thymus, neonate N10.CNhs11194.748-24E47.86
thymus, neonate N20.CNhs11186.820-7A27.41
thymus, neonate N25.CNhs11125.1362-25G78.18
thymus, neonate N30.CNhs11132.1393-42G28.06
tongue, adult.CNhs10499.32-1B47.71
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E45.02
uterus, adult pregnant day19.CNhs10497.590-15F54.69
uterus, adult.CNhs10509.92-27E54.03
vagina, adult.CNhs10502.89-27D57.50
vesicular gland, adult.CNhs10491.51-27F89.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C23.87
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B44.41





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic lineage restricted progenitor cell6.58e-0725

Uber anatomy
Ontology termp-valuen
adult organism1.63e-1151
endoderm-derived structure3.61e-10118
endoderm3.61e-10118
presumptive endoderm3.61e-10118
digestive system5.62e-10116
digestive tract5.62e-10116
primitive gut5.62e-10116
subdivision of digestive tract2.03e-09114
hemolymphoid system1.21e-0848
immune system1.21e-0848
hematopoietic system8.51e-0845
blood island8.51e-0845
mixed endoderm/mesoderm-derived structure7.34e-0735
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