FFCP PHASE1:Mm9::chr3:135488569..135488584,+: Difference between revisions
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{{FFCP|EntrezGene=67547|HGNC=|UniProt=|association_with_transcript=-33bp_to_ENSMUST00000139953_5end|description=CAGE_peak_5_at_Slc39a8_5end|id=chr3:135488569..135488584,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003104!6.20e-13!131;UBERON:0009142!6.20e-13!131;UBERON:0009569!2.20e-12!66;UBERON:0005177!4.15e-12!85;UBERON:0000926!4.69e-11!193;UBERON:0004120!4.69e-11!193;UBERON:0006603!4.69e-11!193;UBERON:0002100!6.95e-11!98;UBERON:0002365!1.18e-10!25;UBERON:0002330!1.18e-10!25;UBERON:0000077!1.28e-10!97;UBERON:0001041!2.04e-10!92;UBERON:0005172!2.14e-10!49;UBERON:0005173!2.14e-10!49;UBERON:0002417!2.14e-10!49;UBERON:0000916!2.14e-10!49;UBERON:0009854!1.40e-09!23;UBERON:0009856!1.40e-09!23;UBERON:0002107!4.64e-09!22;UBERON:0007499!4.64e-09!22;UBERON:0006925!4.64e-09!22;UBERON:0009497!4.64e-09!22;UBERON:0000015!4.64e-09!22;UBERON:0002423!4.64e-09!22;UBERON:0006235!4.64e-09!22;UBERON:0008835!4.64e-09!22;UBERON:0003894!4.64e-09!22;UBERON:0004161!4.64e-09!22;UBERON:0008836!4.64e-09!22;UBERON:0002530!9.17e-09!65;UBERON:0005057!9.94e-08!51;UBERON:0002368!1.33e-07!60;UBERON:0000949!1.50e-07!72;UBERON:0005911!1.80e-07!69;UBERON:0001048!4.91e-07!147;UBERON:0000475!7.71e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.10e-14,25;UBERON:0002330,1.10e-14,25;UBERON:0009854,4.13e-13,23;UBERON:0009856,4.13e-13,23;UBERON:0002107,2.40e-12,22;UBERON:0007499,2.40e-12,22;UBERON:0006925,2.40e-12,22;UBERON:0009497,2.40e-12,22;UBERON:0000015,2.40e-12,22;UBERON:0002423,2.40e-12,22;UBERON:0006235,2.40e-12,22;UBERON:0008835,2.40e-12,22;UBERON:0003894,2.40e-12,22;UBERON:0004161,2.40e-12,22;UBERON:0008836,2.40e-12,22;UBERON:0009569,7.11e-12,66;UBERON:0001041,3.38e-11,80;UBERON:0005177,3.97e-11,79;UBERON:0002530,5.60e-11,65;UBERON:0005172,7.63e-11,49;UBERON:0005173,7.63e-11,49;UBERON:0002417,7.63e-11,49;UBERON:0000916,7.63e-11,49;UBERON:0005911,3.02e-10,69;UBERON:0002100,1.46e-09,90;UBERON:0003104,2.28e-09,61;UBERON:0009142,2.28e-09,61;UBERON:0002368,5.87e-09,60;UBERON:0000949,1.10e-08,72;UBERON:0003929,5.17e-08,55;UBERON:0003914,7.34e-07,47|phase1_expression=0.480446541314382,0,0,0,0,0.33575854382378,0.233612640595526,0.516493293766305,0.563154888606667,1.17032263160997,0,0.319088635981346,0.684802919724823,1.04904482902797,0.333109761815663,0.404950534779652,0.699561878128147,0.157731082679119,0.411343300817216,0,0.765389611359628,0.397163804803541,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0.430942465371778,0.380046838912748,0.252030129759931,0,0.635030673459631,0.61506478758457,0,0.577703239502549,0.664938581433969,0.204169356262369,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0,1.51076181570693,0.202753862439029,0.734187008646726,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0.699932108126813,0,0,1.45072428402269,0.672187598284928,0.771778308107841,0.573066879877513,0,0,0,0,0,0,1.3498495759221,0,0.7104801149461,0,0,0.311068836925433,0.135005938331691,0.210324961351382,0,0.883474163806454,0.244981598429908,0.383381884072945,0,0,0.638436690425939,0.921639199537461,0,0.457438218012048,0.52091337055676,0,0.56276261003168,0.30559649555362,1.17851434189467,1.13897344639282,0.745597783301202,0.075726193333184,0.604572480854284,1.15945795480671,2.58127163094416,0,2.69851595818909,2.59910566979068,4.92829575807069,1.12355536105401,0,0,0,1.83096445709685,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.91347103775248,0.776813650941515,0.148442139064825,0.346970653532272,0.608930956624282,0.691846491768175,0.753613202763113,1.05829836422134,0.628332956648377,5.43828929015623,1.3013942122792,0.884610551949874,0.485300549842228,0.441683036920787,1.93950101254089,1.86391761218122,0.585561594023094,0.41889341362691,0.510914110417183,0.958520996047362,1.19980546198682,1.65191295194984,1.64769703345305,0.915001205637253,0.376963056338593,0,0,0.62336413367868,0.811206315338788,1.01839363850316,0.622034853050465,2.0217820674694,0.420883711772948,0.520481771850815,0,0.900310649026746,0.753524089178575,0.476255494059295,0.2562274405697,0.468508622798644,1.03481348295606,0,0.378212160335639,0.351902248327898,1.09597866213787,1.39023624612799,1.39300866608867,1.4404749548556,0.995171334092466,1.40442637462647,0.51469581422943,0.852490498186778,0.828503090142008,0.703578179943289,1.2604344302271,1.18372367792605,1.18058539048442,0.771335564436891,0,0.804820204198858,0.934122738937356,0.16455984991348,0.656669856316381,0.243206428637567,0,0.658650345873152,1.20785776884335,0,0.205809224758569,0.330418782983798,0.528901133327089,0.639864751605702,1.16118335930219,0.257734922644187,0.80673409849337,1.33426826306922,0.951128130562796,0,0.329397909448022,0.754005626400808,0.198956472041151,0.58489226135736,0,0.648414149624083,1.1948476395262,0.948339504765408,1.25673363870702,1.1270773567308,1.4255592949172,3.49114476901726,2.10407459670956,2.84564417059158,1.476101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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67547 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-33bp_to_ENSMUST00000139953_5end | |||
|cluster_id=chr3:135488569..135488584,+ | |||
|description=CAGE_peak_5_at_Slc39a8_5end | |||
|id=chr3:135488569..135488584,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!6.20e-13!131;UBERON:0009142!6.20e-13!131;UBERON:0009569!2.20e-12!66;UBERON:0005177!4.15e-12!85;UBERON:0000926!4.69e-11!193;UBERON:0004120!4.69e-11!193;UBERON:0006603!4.69e-11!193;UBERON:0002100!6.95e-11!98;UBERON:0002365!1.18e-10!25;UBERON:0002330!1.18e-10!25;UBERON:0000077!1.28e-10!97;UBERON:0001041!2.04e-10!92;UBERON:0005172!2.14e-10!49;UBERON:0005173!2.14e-10!49;UBERON:0002417!2.14e-10!49;UBERON:0000916!2.14e-10!49;UBERON:0009854!1.40e-09!23;UBERON:0009856!1.40e-09!23;UBERON:0002107!4.64e-09!22;UBERON:0007499!4.64e-09!22;UBERON:0006925!4.64e-09!22;UBERON:0009497!4.64e-09!22;UBERON:0000015!4.64e-09!22;UBERON:0002423!4.64e-09!22;UBERON:0006235!4.64e-09!22;UBERON:0008835!4.64e-09!22;UBERON:0003894!4.64e-09!22;UBERON:0004161!4.64e-09!22;UBERON:0008836!4.64e-09!22;UBERON:0002530!9.17e-09!65;UBERON:0005057!9.94e-08!51;UBERON:0002368!1.33e-07!60;UBERON:0000949!1.50e-07!72;UBERON:0005911!1.80e-07!69;UBERON:0001048!4.91e-07!147;UBERON:0000475!7.71e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.10e-14,25;UBERON:0002330,1.10e-14,25;UBERON:0009854,4.13e-13,23;UBERON:0009856,4.13e-13,23;UBERON:0002107,2.40e-12,22;UBERON:0007499,2.40e-12,22;UBERON:0006925,2.40e-12,22;UBERON:0009497,2.40e-12,22;UBERON:0000015,2.40e-12,22;UBERON:0002423,2.40e-12,22;UBERON:0006235,2.40e-12,22;UBERON:0008835,2.40e-12,22;UBERON:0003894,2.40e-12,22;UBERON:0004161,2.40e-12,22;UBERON:0008836,2.40e-12,22;UBERON:0009569,7.11e-12,66;UBERON:0001041,3.38e-11,80;UBERON:0005177,3.97e-11,79;UBERON:0002530,5.60e-11,65;UBERON:0005172,7.63e-11,49;UBERON:0005173,7.63e-11,49;UBERON:0002417,7.63e-11,49;UBERON:0000916,7.63e-11,49;UBERON:0005911,3.02e-10,69;UBERON:0002100,1.46e-09,90;UBERON:0003104,2.28e-09,61;UBERON:0009142,2.28e-09,61;UBERON:0002368,5.87e-09,60;UBERON:0000949,1.10e-08,72;UBERON:0003929,5.17e-08,55;UBERON:0003914,7.34e-07,47 | |||
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| |||
|short_description=p5@Slc39a8 | |||
}} |
Latest revision as of 16:10, 1 October 2015
Short description: | p5@Slc39a8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Slc39a8_5end |
Coexpression cluster: | NA |
Association with transcript: | -33bp_to_ENSMUST00000139953_5end |
EntrezGene: | Slc39a8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 1.10e-14 | 25 |
exocrine system | 1.10e-14 | 25 |
digestive tract diverticulum | 4.13e-13 | 23 |
sac | 4.13e-13 | 23 |
liver | 2.40e-12 | 22 |
epithelial sac | 2.40e-12 | 22 |
digestive gland | 2.40e-12 | 22 |
epithelium of foregut-midgut junction | 2.40e-12 | 22 |
anatomical boundary | 2.40e-12 | 22 |
hepatobiliary system | 2.40e-12 | 22 |
foregut-midgut junction | 2.40e-12 | 22 |
hepatic diverticulum | 2.40e-12 | 22 |
liver primordium | 2.40e-12 | 22 |
septum transversum | 2.40e-12 | 22 |
liver bud | 2.40e-12 | 22 |
subdivision of trunk | 7.11e-12 | 66 |
foregut | 3.38e-11 | 80 |
trunk region element | 3.97e-11 | 79 |
gland | 5.60e-11 | 65 |
abdomen element | 7.63e-11 | 49 |
abdominal segment element | 7.63e-11 | 49 |
abdominal segment of trunk | 7.63e-11 | 49 |
abdomen | 7.63e-11 | 49 |
endo-epithelium | 3.02e-10 | 69 |
trunk | 1.46e-09 | 90 |
mesenchyme | 2.28e-09 | 61 |
entire embryonic mesenchyme | 2.28e-09 | 61 |
endocrine gland | 5.87e-09 | 60 |
endocrine system | 1.10e-08 | 72 |
gut epithelium | 5.17e-08 | 55 |
epithelial tube | 7.34e-07 | 47 |