Personal tools

FFCP PHASE1:Mm9::chr3:137806852..137806883,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=108943|HGNC=|MCL_coexpression_id=0|UniProt=E0CZ56|association_with_transcript=0bp_to_ENSMUST00000161141_5end|description=CAGE_peak_3_at_Rg9mtd2_5end|id=chr3:137806852..137806883,+|ontology_enrichment_celltype=CL:0000838!3.82e-07!12|ontology_enrichment_celltype_v019_2=CL:0000838,8.58e-08,12;CL:0000084,4.64e-07,11;CL:0000827,4.64e-07,11;CL:0000542,9.81e-07,13;CL:0000051,9.81e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=2.40223270657191,0.348975407639361,0.454999239389536,0,0.500895729946347,0.503637815735669,0.467225281191051,4.9066862907799,1.97104211012333,3.5109678948299,4.28044920563762,3.98860794976682,4.45121897821135,3.75907730401689,0,1.21485160433896,1.39912375625629,1.73504190947031,1.23402990245165,1.69755860719212,21.6009956983717,1.98581902401771,2.61199789138935,1.75991665072747,1.37645568640302,0,0,0.646413698057667,0.570070258369122,0.252030129759931,0.665191531965914,3.81018404075779,2.46025915033828,0,1.1554064790051,0.332469290716985,1.63335485009895,1.67412652294763,0,0.523523743973798,1.17646297606203,2.04913645487534,0,0.377690453926732,0.608261587317087,0.550640256485045,0.782391344348039,0.65407546914134,0.659058548203415,0.388859798148567,0.419959264876088,0,7.3824346665404,3.62681071005672,1.00828139742739,0,0.286533439938757,0,1.41621522601718,2.64495489636016,1.90149421051854,1.0165335962074,0,0,0.988866362566974,0.7104801149461,0.898800331555214,1.53687322128622,0.829516898467821,1.08004750665353,1.26194976810829,0.856952953211411,0.883474163806454,0.979926393719632,0.862609239164127,2.75765635983006,1.10115880999389,1.65993539510744,0.768032666281217,1.05509030184155,1.46380229763855,1.04182674111352,0.837548997004143,1.12552522006336,1.06958773443767,1.76777151284201,1.13897344639282,1.1183966749518,0.454357159999104,0.982430281388212,3.47837386442013,0.860423876981386,0.679971333707751,1.61910957491345,1.94932925234301,3.58421509677868,1.54488862144927,0.681721290312231,0.779358013808606,0.35333957451034,1.54927761754349,0,0,0,1.08245520505607,0,1.01104889002957,4.33898742932428,1.55362730188303,0.742210695324124,1.73485326766136,2.13125834818499,0.461230994512117,1.20578112442098,0.470354828542819,0.251333182659351,0.494389935468748,1.01219549843938,4.42305275974937,0.970601099684455,0.441683036920787,1.93950101254089,1.86391761218122,2.04946557908083,1.25668024088073,0.510914110417183,1.31796636956512,1.19980546198682,1.01656181658452,1.19832511523858,2.28750301409313,1.00523481690292,1.21677024134594,2.04572365864264,2.0778804455956,0.486723789203273,1.62942982160506,0.622034853050465,2.52722758433675,1.47309299120532,0.910843100738926,1.83921683546778,2.34080768746954,1.50704817835715,2.72145996605311,2.17793324484245,0.843315521037559,0,1.29340795759705,1.13463648100692,1.58356011747554,1.09597866213787,1.11218899690239,1.0447564995665,1.4404749548556,1.79130840136644,2.1066395619397,0.772043721344145,2.27330799516474,0.621377317606506,0.938104239924385,0.720248245844059,0.946978942340841,1.37734962223183,0.462801338662135,1.16266972375204,0,0.934122738937356,0.822799249567402,0.164167464079095,0.56748166682099,0.584799949701329,0,0.268412837520744,0.841159794256509,1.54356918568927,0.330418782983798,0.264450566663544,0.426576501070468,1.39342003116263,1.54640953586512,0.403367049246685,0,0.951128130562796,0.474529061544512,0.164698954724011,0.754005626400808,0.795825888164603,0.58489226135736,0,0.648414149624083,0.199141273254367,1.51734320762465,0.799739588268102,0,1.4255592949172,1.35766741017338,1.19230893813542,1.70738650235495,1.62371162777562,0.941992367048249,1.48076596706161,0.889357881261447,1.83529616287703,0.786235980452812,1.34917267430912,0.811440485554012,0.72353147925725,0.50925170356284,1.15078454980324,1.29708181420028,0.274561413188081,0,0,0,0.757736633841335,0.896987067609561,3.85954817090694,0.554259570499814,0.947457058852424,1.46668478797823,0.678980343100753,1.17345124144251,0.502518772325447,0.476087281772027,0.195133647857799,0.945810864637146,0.8858587585951,0.159454768657487,0.163863314715738,0.518054945597687,0.723245292907558,0,0.54390568381871,0.491764273019036,1.37968373152366,1.28440471990234,1.28932855251423,0.327869890753351,0.757412781613119,2.2085575359138,2.34263246577983,1.07711698866399,1.43381278771531,2.00518806674155,0.849229592366497,1.61924280669958,0.584511715822624,1.58115111178609,1.60660658210904,0.99358059645788,1.78065603667255,0.81443479676788,1.48473110675282,5.30980553359851,1.21390318077491,0.302323556964751,1.13163047853539,1.47650946440386,0.922305443831782,0.775284879504663,1.09060118843252,1.78248689192361,1.26414703174326,1.05418608574999,3.09406629744561,2.38307724027652,1.08036656418786,1.03486947026204,0.214337035031592,2.6601035046341,2.85390108163313,2.46823530903181,1.2178597964584,0.704015124191131,0.21183207086382,1.10264199027481,0.8244312647074,1.13025098687134,1.02531972377865,1.07435109602823,0.656563598980245,0,1.66882771809459,1.02522528478712,2.06386867963222,0.925972636848558,1.50694765603753,1.0935538217682,0.915112692826091,0.849892149969277,0.69975726161829,1.10559979043539,0,1.58167996790568,0.609958401380546,0.86404272657441,1.04544148007234,1.52853794622324,0.944050424693745,0.661227645802687,0.26175594198403,0.777689839750757,0,65.3883808873661,2.24274819065968,1.15820943319968,2.13896307178452,2.58319646955462,1.85851738039856,1.76035857968631,1.8228613878153,2.83120229949419,42.0356370237251,43.2045009386798,1.58005560314089,1.21635129174099,1.64337531463724,1.81889152168913,1.61124026100733,0.79472541912506,0.480781798079875,1.03382669022204,1.11063094942962,1.447929326445,1.41156659191577,1.16949456887703,1.25075394132428,1.75315353272353,0.906921534460845,1.77588762699252,1.07656627931371,0.671538465456314,0.772758376128762,1.12609485270709,2.01466786693992,1.07184189539533,1.00314420807073,1.6942555278512,1.38097570952153,2.86447756719698,1.3748254587495,2.05524755931193,0.755393897389701,2.70009000092722,2.2516060161211,0.906284817968409,0.51776031175182,1.14166082342594,1.99512436700516,1.53660245178721,0.243106717068294,1.46729213839588,0.551530525350042,0.666740183404846,2.06035057238894,0.64183841918363,0.505394423527595,1.77435509923168,1.13175804831646,0.655490552289177,0.768301828858431,0.689225627467359,0,1.0429589335037,1.73618298417335,0.412085900803307,0.883193520806384,0,0.354951612318675,1.90748951957857,0.872078499793971,0.564656282491984,0.676916863133412,1.09756783723664,0.789209134313529,0.950628796921032,3.36685362994643,0.711810108745045,0.0985044823755635,0.818462086339379,0.619747364743864,0.192906610981141,0.749431733813838,1.16965804222704,1.28922632428979,2.29545998482612,0.661774257358546,1.15933917810211|short_description=p3@Rg9mtd2}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=108943
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=E0CZ56
|association_with_transcript=0bp_to_ENSMUST00000161141_5end
|cluster_id=chr3:137806852..137806883,+
|description=CAGE_peak_3_at_Rg9mtd2_5end
|id=chr3:137806852..137806883,+
|ontology_enrichment_celltype=CL:0000838!3.82e-07!12
|ontology_enrichment_celltype_v019_2=CL:0000838,8.58e-08,12;CL:0000084,4.64e-07,11;CL:0000827,4.64e-07,11;CL:0000542,9.81e-07,13;CL:0000051,9.81e-07,13
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=2.40223270657191,0.348975407639361,0.454999239389536,0,0.500895729946347,0.503637815735669,0.467225281191051,4.9066862907799,1.97104211012333,3.5109678948299,4.28044920563762,3.98860794976682,4.45121897821135,3.75907730401689,0,1.21485160433896,1.39912375625629,1.73504190947031,1.23402990245165,1.69755860719212,21.6009956983717,1.98581902401771,2.61199789138935,1.75991665072747,1.37645568640302,0,0,0.646413698057667,0.570070258369122,0.252030129759931,0.665191531965914,3.81018404075779,2.46025915033828,0,1.1554064790051,0.332469290716985,1.63335485009895,1.67412652294763,0,0.523523743973798,1.17646297606203,2.04913645487534,0,0.377690453926732,0.608261587317087,0.550640256485045,0.782391344348039,0.65407546914134,0.659058548203415,0.388859798148567,0.419959264876088,0,7.3824346665404,3.62681071005672,1.00828139742739,0,0.286533439938757,0,1.41621522601718,2.64495489636016,1.90149421051854,1.0165335962074,0,0,0.988866362566974,0.7104801149461,0.898800331555214,1.53687322128622,0.829516898467821,1.08004750665353,1.26194976810829,0.856952953211411,0.883474163806454,0.979926393719632,0.862609239164127,2.75765635983006,1.10115880999389,1.65993539510744,0.768032666281217,1.05509030184155,1.46380229763855,1.04182674111352,0.837548997004143,1.12552522006336,1.06958773443767,1.76777151284201,1.13897344639282,1.1183966749518,0.454357159999104,0.982430281388212,3.47837386442013,0.860423876981386,0.679971333707751,1.61910957491345,1.94932925234301,3.58421509677868,1.54488862144927,0.681721290312231,0.779358013808606,0.35333957451034,1.54927761754349,0,0,0,1.08245520505607,0,1.01104889002957,4.33898742932428,1.55362730188303,0.742210695324124,1.73485326766136,2.13125834818499,0.461230994512117,1.20578112442098,0.470354828542819,0.251333182659351,0.494389935468748,1.01219549843938,4.42305275974937,0.970601099684455,0.441683036920787,1.93950101254089,1.86391761218122,2.04946557908083,1.25668024088073,0.510914110417183,1.31796636956512,1.19980546198682,1.01656181658452,1.19832511523858,2.28750301409313,1.00523481690292,1.21677024134594,2.04572365864264,2.0778804455956,0.486723789203273,1.62942982160506,0.622034853050465,2.52722758433675,1.47309299120532,0.910843100738926,1.83921683546778,2.34080768746954,1.50704817835715,2.72145996605311,2.17793324484245,0.843315521037559,0,1.29340795759705,1.13463648100692,1.58356011747554,1.09597866213787,1.11218899690239,1.0447564995665,1.4404749548556,1.79130840136644,2.1066395619397,0.772043721344145,2.27330799516474,0.621377317606506,0.938104239924385,0.720248245844059,0.946978942340841,1.37734962223183,0.462801338662135,1.16266972375204,0,0.934122738937356,0.822799249567402,0.164167464079095,0.56748166682099,0.584799949701329,0,0.268412837520744,0.841159794256509,1.54356918568927,0.330418782983798,0.264450566663544,0.426576501070468,1.39342003116263,1.54640953586512,0.403367049246685,0,0.951128130562796,0.474529061544512,0.164698954724011,0.754005626400808,0.795825888164603,0.58489226135736,0,0.648414149624083,0.199141273254367,1.51734320762465,0.799739588268102,0,1.4255592949172,1.35766741017338,1.19230893813542,1.70738650235495,1.62371162777562,0.941992367048249,1.48076596706161,0.889357881261447,1.83529616287703,0.786235980452812,1.34917267430912,0.811440485554012,0.72353147925725,0.50925170356284,1.15078454980324,1.29708181420028,0.274561413188081,0,0,0,0.757736633841335,0.896987067609561,3.85954817090694,0.554259570499814,0.947457058852424,1.46668478797823,0.678980343100753,1.17345124144251,0.502518772325447,0.476087281772027,0.195133647857799,0.945810864637146,0.8858587585951,0.159454768657487,0.163863314715738,0.518054945597687,0.723245292907558,0,0.54390568381871,0.491764273019036,1.37968373152366,1.28440471990234,1.28932855251423,0.327869890753351,0.757412781613119,2.2085575359138,2.34263246577983,1.07711698866399,1.43381278771531,2.00518806674155,0.849229592366497,1.61924280669958,0.584511715822624,1.58115111178609,1.60660658210904,0.99358059645788,1.78065603667255,0.81443479676788,1.48473110675282,5.30980553359851,1.21390318077491,0.302323556964751,1.13163047853539,1.47650946440386,0.922305443831782,0.775284879504663,1.09060118843252,1.78248689192361,1.26414703174326,1.05418608574999,3.09406629744561,2.38307724027652,1.08036656418786,1.03486947026204,0.214337035031592,2.6601035046341,2.85390108163313,2.46823530903181,1.2178597964584,0.704015124191131,0.21183207086382,1.10264199027481,0.8244312647074,1.13025098687134,1.02531972377865,1.07435109602823,0.656563598980245,0,1.66882771809459,1.02522528478712,2.06386867963222,0.925972636848558,1.50694765603753,1.0935538217682,0.915112692826091,0.849892149969277,0.69975726161829,1.10559979043539,0,1.58167996790568,0.609958401380546,0.86404272657441,1.04544148007234,1.52853794622324,0.944050424693745,0.661227645802687,0.26175594198403,0.777689839750757,0,65.3883808873661,2.24274819065968,1.15820943319968,2.13896307178452,2.58319646955462,1.85851738039856,1.76035857968631,1.8228613878153,2.83120229949419,42.0356370237251,43.2045009386798,1.58005560314089,1.21635129174099,1.64337531463724,1.81889152168913,1.61124026100733,0.79472541912506,0.480781798079875,1.03382669022204,1.11063094942962,1.447929326445,1.41156659191577,1.16949456887703,1.25075394132428,1.75315353272353,0.906921534460845,1.77588762699252,1.07656627931371,0.671538465456314,0.772758376128762,1.12609485270709,2.01466786693992,1.07184189539533,1.00314420807073,1.6942555278512,1.38097570952153,2.86447756719698,1.3748254587495,2.05524755931193,0.755393897389701,2.70009000092722,2.2516060161211,0.906284817968409,0.51776031175182,1.14166082342594,1.99512436700516,1.53660245178721,0.243106717068294,1.46729213839588,0.551530525350042,0.666740183404846,2.06035057238894,0.64183841918363,0.505394423527595,1.77435509923168,1.13175804831646,0.655490552289177,0.768301828858431,0.689225627467359,0,1.0429589335037,1.73618298417335,0.412085900803307,0.883193520806384,0,0.354951612318675,1.90748951957857,0.872078499793971,0.564656282491984,0.676916863133412,1.09756783723664,0.789209134313529,0.950628796921032,3.36685362994643,0.711810108745045,0.0985044823755635,0.818462086339379,0.619747364743864,0.192906610981141,0.749431733813838,1.16965804222704,1.28922632428979,2.29545998482612,0.661774257358546,1.15933917810211
|short_description=p3@Rg9mtd2
}}

Latest revision as of 16:42, 1 October 2015

Short description:p3@Rg9mtd2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rg9mtd2_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 0bp_to_ENSMUST00000161141_5end
EntrezGene:Rg9mtd2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rg9mtd2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.99
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.76
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.38
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.34
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C62.72
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D51.71
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G565.39
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D92.83
testis, neonate N20.CNhs11110.839-18H342.04
testis, neonate N30.CNhs11130.1391-42E243.20
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D31.45
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell8.58e-0812
T cell4.64e-0711
pro-T cell4.64e-0711
lymphocyte9.81e-0713
common lymphoid progenitor9.81e-0713
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:137806852..137806883,%2B&oldid=4312179"