FFCP PHASE1:Mm9::chr3:95328801..95328817,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=195|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:95328801..95328817,-|id=chr3:95328801..95328817,-|ontology_enrichment_celltype=CL:0002563!8.38e-15!9;CL:0002251!8.38e-15!9;CL:0000239!1.91e-10!6;CL:0000677!1.91e-10!6;CL:0000212!1.91e-10!6;CL:0000584!1.91e-10!6;CL:0000075!8.15e-09!7;CL:0002076!4.65e-08!15;CL:0000066!1.78e-07!25|ontology_enrichment_celltype_v019_2=CL:0002563,3.78e-13,9;CL:0002251,3.78e-13,9;CL:0000239,2.83e-09,6;CL:0000677,2.83e-09,6;CL:0000584,2.83e-09,6;CL:0000075,5.88e-08,7;CL:0002076,1.19e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!6.53e-31!43;UBERON:0005409!3.68e-25!59;UBERON:0000344!2.96e-20!15;UBERON:0001242!6.17e-18!13;UBERON:0000060!6.17e-18!13;UBERON:0001262!6.17e-18!13;UBERON:0004786!6.17e-18!13;UBERON:0003350!8.38e-15!9;UBERON:0004808!8.38e-15!9;UBERON:0001277!8.38e-15!9;UBERON:0000485!9.93e-12!11;UBERON:0004923!3.13e-11!24;UBERON:0001007!4.21e-08!128;UBERON:0001555!4.21e-08!128;UBERON:0007026!4.21e-08!128;UBERON:0004119!7.67e-08!130;UBERON:0000925!7.67e-08!130;UBERON:0006595!7.67e-08!130;UBERON:0004921!4.78e-07!126;UBERON:0004185!4.78e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.16e-49,31;UBERON:0005409,2.32e-34,47;UBERON:0001242,6.68e-20,13;UBERON:0001262,6.68e-20,13;UBERON:0004786,6.68e-20,13;UBERON:0000344,4.75e-17,15;UBERON:0003350,3.78e-13,9;UBERON:0004808,3.78e-13,9;UBERON:0001277,3.78e-13,9;UBERON:0004921,1.21e-11,114;UBERON:0001007,2.28e-11,116;UBERON:0001555,2.28e-11,116;UBERON:0007026,2.28e-11,116;UBERON:0004119,4.23e-11,118;UBERON:0000925,4.23e-11,118;UBERON:0006595,4.23e-11,118;UBERON:0000485,1.19e-10,11;UBERON:0004923,4.28e-10,24;UBERON:0001155,3.56e-08,2;UBERON:0000059,3.56e-08,2;UBERON:0002108,5.01e-08,4|phase1_expression=0,1.39590163055744,0.909998478779072,6.95667686005709,3.50627010962443,0.33575854382378,1.40167584357315,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.68822784320151,0.57423196411502,1.29228598847722,0.861884930743556,2.09025761402011,1.76421090831952,0,0,0,0,4.33277429626912,0.332469290716985,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,0,0,0,0.38660238396628,1.00841762311671,1.11189021922435,0.570676878337677,1.89811624617805,1.97638745668813,2.76468729680296,2.98434708061726,1.75467678407208,1.79763881730844,2.37751854862164,4.38110801159608,0,0,0,0,0,0.0701358198903186,1.45444035385792,1.18088118383682,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0.727067458955011,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.247960367176008,0,4.53652406521275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0,0.38581844092741,0,0,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0.309873682371932,0,0,0,0,0,0.220591419119515,0|short_description=p@chr3:95328801..95328817,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=195 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:95328801..95328817,- | |||
|description=CAGE_peak_at_chr3:95328801..95328817,- | |||
|id=chr3:95328801..95328817,- | |||
|ontology_enrichment_celltype=CL:0002563!8.38e-15!9;CL:0002251!8.38e-15!9;CL:0000239!1.91e-10!6;CL:0000677!1.91e-10!6;CL:0000212!1.91e-10!6;CL:0000584!1.91e-10!6;CL:0000075!8.15e-09!7;CL:0002076!4.65e-08!15;CL:0000066!1.78e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.78e-13,9;CL:0002251,3.78e-13,9;CL:0000239,2.83e-09,6;CL:0000677,2.83e-09,6;CL:0000584,2.83e-09,6;CL:0000075,5.88e-08,7;CL:0002076,1.19e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.53e-31!43;UBERON:0005409!3.68e-25!59;UBERON:0000344!2.96e-20!15;UBERON:0001242!6.17e-18!13;UBERON:0000060!6.17e-18!13;UBERON:0001262!6.17e-18!13;UBERON:0004786!6.17e-18!13;UBERON:0003350!8.38e-15!9;UBERON:0004808!8.38e-15!9;UBERON:0001277!8.38e-15!9;UBERON:0000485!9.93e-12!11;UBERON:0004923!3.13e-11!24;UBERON:0001007!4.21e-08!128;UBERON:0001555!4.21e-08!128;UBERON:0007026!4.21e-08!128;UBERON:0004119!7.67e-08!130;UBERON:0000925!7.67e-08!130;UBERON:0006595!7.67e-08!130;UBERON:0004921!4.78e-07!126;UBERON:0004185!4.78e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.16e-49,31;UBERON:0005409,2.32e-34,47;UBERON:0001242,6.68e-20,13;UBERON:0001262,6.68e-20,13;UBERON:0004786,6.68e-20,13;UBERON:0000344,4.75e-17,15;UBERON:0003350,3.78e-13,9;UBERON:0004808,3.78e-13,9;UBERON:0001277,3.78e-13,9;UBERON:0004921,1.21e-11,114;UBERON:0001007,2.28e-11,116;UBERON:0001555,2.28e-11,116;UBERON:0007026,2.28e-11,116;UBERON:0004119,4.23e-11,118;UBERON:0000925,4.23e-11,118;UBERON:0006595,4.23e-11,118;UBERON:0000485,1.19e-10,11;UBERON:0004923,4.28e-10,24;UBERON:0001155,3.56e-08,2;UBERON:0000059,3.56e-08,2;UBERON:0002108,5.01e-08,4 | |||
|phase1_expression=0,1.39590163055744,0.909998478779072,6.95667686005709,3.50627010962443,0.33575854382378,1.40167584357315,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.68822784320151,0.57423196411502,1.29228598847722,0.861884930743556,2.09025761402011,1.76421090831952,0,0,0,0,4.33277429626912,0.332469290716985,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,0,0,0,0.38660238396628,1.00841762311671,1.11189021922435,0.570676878337677,1.89811624617805,1.97638745668813,2.76468729680296,2.98434708061726,1.75467678407208,1.79763881730844,2.37751854862164,4.38110801159608,0,0,0,0,0,0.0701358198903186,1.45444035385792,1.18088118383682,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0.727067458955011,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.247960367176008,0,4.53652406521275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0,0.38581844092741,0,0,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0.309873682371932,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr3:95328801..95328817,- | |||
}} |
Latest revision as of 08:19, 4 August 2015
Short description: | p@chr3:95328801..95328817, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:95328801..95328817, - |
Coexpression cluster: | MCL_coexpression_mm9:195 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.78e-13 | 9 |
epithelial cell of alimentary canal | 3.78e-13 | 9 |
brush border epithelial cell | 2.83e-09 | 6 |
gut absorptive cell | 2.83e-09 | 6 |
enterocyte | 2.83e-09 | 6 |
columnar/cuboidal epithelial cell | 5.88e-08 | 7 |
endo-epithelial cell | 1.19e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.16e-49 | 31 |
gastrointestinal system | 2.32e-34 | 47 |
intestinal mucosa | 6.68e-20 | 13 |
wall of intestine | 6.68e-20 | 13 |
gastrointestinal system mucosa | 6.68e-20 | 13 |
mucosa | 4.75e-17 | 15 |
epithelium of mucosa | 3.78e-13 | 9 |
gastrointestinal system epithelium | 3.78e-13 | 9 |
intestinal epithelium | 3.78e-13 | 9 |
subdivision of digestive tract | 1.21e-11 | 114 |
digestive system | 2.28e-11 | 116 |
digestive tract | 2.28e-11 | 116 |
primitive gut | 2.28e-11 | 116 |
endoderm-derived structure | 4.23e-11 | 118 |
endoderm | 4.23e-11 | 118 |
presumptive endoderm | 4.23e-11 | 118 |
simple columnar epithelium | 1.19e-10 | 11 |
organ component layer | 4.28e-10 | 24 |
colon | 3.56e-08 | 2 |
large intestine | 3.56e-08 | 2 |
small intestine | 5.01e-08 | 4 |