FFCP PHASE1:Mm9::chr4:101028465..101028488,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=8|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:101028465..101028488,+|id=chr4:101028465..101028488,+|ontology_enrichment_celltype=CL:0000181!7.76e-08!5;CL:0000417!7.76e-08!5;CL:0000668!7.76e-08!5;CL:0000412!7.76e-08!5;CL:0000182!7.76e-08!5|ontology_enrichment_celltype_v019_2=CL:0000182,1.75e-21,5;CL:0000057,9.86e-08,1;CL:0000632,9.86e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.44e-11!22;UBERON:0007499!2.44e-11!22;UBERON:0006925!2.44e-11!22;UBERON:0009497!2.44e-11!22;UBERON:0000015!2.44e-11!22;UBERON:0002423!2.44e-11!22;UBERON:0006235!2.44e-11!22;UBERON:0008835!2.44e-11!22;UBERON:0003894!2.44e-11!22;UBERON:0004161!2.44e-11!22;UBERON:0008836!2.44e-11!22;UBERON:0002365!7.08e-11!25;UBERON:0002330!7.08e-11!25;UBERON:0009854!1.25e-10!23;UBERON:0009856!1.25e-10!23;UBERON:0005256!5.11e-08!47;UBERON:0003914!1.67e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.27e-28,22;UBERON:0007499,6.27e-28,22;UBERON:0006925,6.27e-28,22;UBERON:0009497,6.27e-28,22;UBERON:0000015,6.27e-28,22;UBERON:0002423,6.27e-28,22;UBERON:0006235,6.27e-28,22;UBERON:0008835,6.27e-28,22;UBERON:0003894,6.27e-28,22;UBERON:0004161,6.27e-28,22;UBERON:0008836,6.27e-28,22;UBERON:0009854,1.13e-26,23;UBERON:0009856,1.13e-26,23;UBERON:0002365,1.83e-24,25;UBERON:0002330,1.83e-24,25;UBERON:0003914,3.63e-15,47;UBERON:0005256,3.95e-13,45;UBERON:0005172,5.73e-12,49;UBERON:0005173,5.73e-12,49;UBERON:0002417,5.73e-12,49;UBERON:0000916,5.73e-12,49;UBERON:0003929,1.54e-10,55;UBERON:0002368,1.45e-09,60;UBERON:0003104,2.18e-09,61;UBERON:0009142,2.18e-09,61;UBERON:0002530,9.73e-09,65;UBERON:0000490,1.38e-08,66;UBERON:0009569,1.38e-08,66;UBERON:0005911,3.66e-08,69;UBERON:0000949,8.99e-08,72;UBERON:0005177,5.63e-07,79;UBERON:0001041,7.13e-07,80|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0.0755715601067855,0.869593466105033,2.58127163094416,4.0798280022465,5.93673510801599,7.79731700937203,8.96053774194671,2.24711072210803,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,1.01219549843938,0,0,0,0.484875253135222,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0,0.305518091550949,0.248813941220186,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295220295959204,0.627994911365499,0,5.63259991465583,0,0,0,0,0,0,0,0.648540907100142,0.274561413188081,1.43768206527355,1.11642284300551,0.312037673114561,1.01031551178845,0.896987067609561,2.41221760681684,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0.42366414172764,0,0.8244312647074,1.93757312035087,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0.241584120826006,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0.680191150845634,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0.320919209591815,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0.467863216890817,0,0.57386499620653,0.220591419119515,0.231867835620421|short_description=p@chr4:101028465..101028488,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:101028465..101028488,+ | |||
|description=CAGE_peak_at_chr4:101028465..101028488,+ | |||
|id=chr4:101028465..101028488,+ | |||
|ontology_enrichment_celltype=CL:0000181!7.76e-08!5;CL:0000417!7.76e-08!5;CL:0000668!7.76e-08!5;CL:0000412!7.76e-08!5;CL:0000182!7.76e-08!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.75e-21,5;CL:0000057,9.86e-08,1;CL:0000632,9.86e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.44e-11!22;UBERON:0007499!2.44e-11!22;UBERON:0006925!2.44e-11!22;UBERON:0009497!2.44e-11!22;UBERON:0000015!2.44e-11!22;UBERON:0002423!2.44e-11!22;UBERON:0006235!2.44e-11!22;UBERON:0008835!2.44e-11!22;UBERON:0003894!2.44e-11!22;UBERON:0004161!2.44e-11!22;UBERON:0008836!2.44e-11!22;UBERON:0002365!7.08e-11!25;UBERON:0002330!7.08e-11!25;UBERON:0009854!1.25e-10!23;UBERON:0009856!1.25e-10!23;UBERON:0005256!5.11e-08!47;UBERON:0003914!1.67e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.27e-28,22;UBERON:0007499,6.27e-28,22;UBERON:0006925,6.27e-28,22;UBERON:0009497,6.27e-28,22;UBERON:0000015,6.27e-28,22;UBERON:0002423,6.27e-28,22;UBERON:0006235,6.27e-28,22;UBERON:0008835,6.27e-28,22;UBERON:0003894,6.27e-28,22;UBERON:0004161,6.27e-28,22;UBERON:0008836,6.27e-28,22;UBERON:0009854,1.13e-26,23;UBERON:0009856,1.13e-26,23;UBERON:0002365,1.83e-24,25;UBERON:0002330,1.83e-24,25;UBERON:0003914,3.63e-15,47;UBERON:0005256,3.95e-13,45;UBERON:0005172,5.73e-12,49;UBERON:0005173,5.73e-12,49;UBERON:0002417,5.73e-12,49;UBERON:0000916,5.73e-12,49;UBERON:0003929,1.54e-10,55;UBERON:0002368,1.45e-09,60;UBERON:0003104,2.18e-09,61;UBERON:0009142,2.18e-09,61;UBERON:0002530,9.73e-09,65;UBERON:0000490,1.38e-08,66;UBERON:0009569,1.38e-08,66;UBERON:0005911,3.66e-08,69;UBERON:0000949,8.99e-08,72;UBERON:0005177,5.63e-07,79;UBERON:0001041,7.13e-07,80 | |||
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0.0755715601067855,0.869593466105033,2.58127163094416,4.0798280022465,5.93673510801599,7.79731700937203,8.96053774194671,2.24711072210803,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,1.01219549843938,0,0,0,0.484875253135222,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0,0.305518091550949,0.248813941220186,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295220295959204,0.627994911365499,0,5.63259991465583,0,0,0,0,0,0,0,0.648540907100142,0.274561413188081,1.43768206527355,1.11642284300551,0.312037673114561,1.01031551178845,0.896987067609561,2.41221760681684,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0.42366414172764,0,0.8244312647074,1.93757312035087,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0.241584120826006,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0.680191150845634,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0.320919209591815,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0.467863216890817,0,0.57386499620653,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr4:101028465..101028488,+ | |||
}} |
Latest revision as of 10:42, 4 August 2015
Short description: | p@chr4:101028465..101028488, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:101028465..101028488, + |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.75e-21 | 5 |
fibroblast | 9.86e-08 | 1 |
hepatic stellate cell | 9.86e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 6.27e-28 | 22 |
epithelial sac | 6.27e-28 | 22 |
digestive gland | 6.27e-28 | 22 |
epithelium of foregut-midgut junction | 6.27e-28 | 22 |
anatomical boundary | 6.27e-28 | 22 |
hepatobiliary system | 6.27e-28 | 22 |
foregut-midgut junction | 6.27e-28 | 22 |
hepatic diverticulum | 6.27e-28 | 22 |
liver primordium | 6.27e-28 | 22 |
septum transversum | 6.27e-28 | 22 |
liver bud | 6.27e-28 | 22 |
digestive tract diverticulum | 1.13e-26 | 23 |
sac | 1.13e-26 | 23 |
exocrine gland | 1.83e-24 | 25 |
exocrine system | 1.83e-24 | 25 |
epithelial tube | 3.63e-15 | 47 |
trunk mesenchyme | 3.95e-13 | 45 |
abdomen element | 5.73e-12 | 49 |
abdominal segment element | 5.73e-12 | 49 |
abdominal segment of trunk | 5.73e-12 | 49 |
abdomen | 5.73e-12 | 49 |
gut epithelium | 1.54e-10 | 55 |
endocrine gland | 1.45e-09 | 60 |
mesenchyme | 2.18e-09 | 61 |
entire embryonic mesenchyme | 2.18e-09 | 61 |
gland | 9.73e-09 | 65 |
unilaminar epithelium | 1.38e-08 | 66 |
subdivision of trunk | 1.38e-08 | 66 |
endo-epithelium | 3.66e-08 | 69 |
endocrine system | 8.99e-08 | 72 |
trunk region element | 5.63e-07 | 79 |
foregut | 7.13e-07 | 80 |