FFCP PHASE1:Mm9::chr4:117602071..117602080,-: Difference between revisions
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{{FFCP|EntrezGene=11876|HGNC=|MCL_coexpression_id=72|UniProt=|association_with_transcript=1bp_to_ENSMUST00000133703_5end|description=CAGE_peak_2_at_Artn_5end|id=chr4:117602071..117602080,-|ontology_enrichment_celltype=CL:0000107!3.45e-09!9|ontology_enrichment_celltype_v019_2=CL:0000107,6.23e-29,9;CL:0000068,4.70e-14,3;CL:0002202,4.70e-14,3;CL:0000069,4.70e-14,3;CL:0002632,4.70e-14,3;CL:0002368,4.70e-14,3;CL:0000307,4.70e-14,3;CL:0000377,4.70e-14,3;CL:0000540,6.35e-09,33;CL:0000047,6.35e-09,33;CL:0000031,6.35e-09,33;CL:0000404,6.35e-09,33;CL:0000393,2.44e-07,39;CL:0000211,2.44e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!3.45e-09!9;UBERON:0000010!4.23e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0002410,6.23e-29,9;UBERON:0000010,1.74e-23,11;UBERON:0003126,4.70e-14,3;UBERON:0001005,4.70e-14,3;UBERON:0007196,4.70e-14,3;UBERON:0001558,4.70e-14,3;UBERON:0000013,1.50e-13,3;UBERON:0000011,7.43e-13,3;UBERON:0002102,3.31e-09,7;UBERON:0004710,3.31e-09,7;UBERON:0005419,3.31e-09,7;UBERON:0005417,3.31e-09,7;UBERON:0005729,3.31e-09,7;UBERON:0010708,4.51e-08,8|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0,0,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226714680320357,0.289864488701678,0,0.679971333707751,0,0,0,0,0,0,0,0.563373679106722,0,0,0,9.95858788651585,11.6545538118545,15.1657333504435,0,0,0.148442139064825,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611036183101898,0.622034853050465,0.505445516867349,0,0,0,0.180062129805349,0.150704817835715,0,0.2562274405697,0.0937017245597288,0,1.29340795759705,1.89106080167819,0.879755620819744,1.53437012699302,0,0.348252166522167,1.02891068203972,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0.853153002140936,0.232236671860439,0.38660238396628,0.80673409849337,0.22237804384487,0,0,0.329397909448022,0.502670417600539,0,0.58489226135736,0,0,0.199141273254367,0.569003702859245,0.228497025219458,1.1270773567308,0.407302655690628,0.193952487167626,0.350679099451593,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0.405720242777006,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0,0,0.469380496577004,0,0.952174563544055,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0.94652465824877,4.68526493155966,3.66219776145758,1.19484398976276,3.11918143715352,3.96307143104365,3.23848561339915,5.55286130031493,5.92931666919785,0.321321316421807,0.283880170416537,0.35613120733451,0,0.989820737835213,0,0.728341908464944,0,0.188605079755898,0,0.614870295887855,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0,0.484393280087717,0.301564624640779,0.119372344003136,0.164140899745061,0,0.18542530201051,0.341741761595705,1.03193433981611,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,1.04544148007234,0.655087691238533,0.269728692769641,0.330613822901344,1.57053565190418,0,0,0,0,0,0,0.258319646955462,0,0.117357238645754,0.2604087696879,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0,1.73870634628971,0.187682475451182,0.915758121336325,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,1.19707462020309,0.512200817262403,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0.188626341386076,0,0.192075457214608,0.34461281373368,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.290692833264657,0.282328141245992,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0.409231043169689,0.619747364743864,0.192906610981141,0.249810577937946,0.701794825336225,0.214871054048298,0,0,0|short_description=p2@Artn}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11876 | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENSMUST00000133703_5end | |||
|cluster_id=chr4:117602071..117602080,- | |||
|description=CAGE_peak_2_at_Artn_5end | |||
|id=chr4:117602071..117602080,- | |||
|ontology_enrichment_celltype=CL:0000107!3.45e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,6.23e-29,9;CL:0000068,4.70e-14,3;CL:0002202,4.70e-14,3;CL:0000069,4.70e-14,3;CL:0002632,4.70e-14,3;CL:0002368,4.70e-14,3;CL:0000307,4.70e-14,3;CL:0000377,4.70e-14,3;CL:0000540,6.35e-09,33;CL:0000047,6.35e-09,33;CL:0000031,6.35e-09,33;CL:0000404,6.35e-09,33;CL:0000393,2.44e-07,39;CL:0000211,2.44e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!3.45e-09!9;UBERON:0000010!4.23e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,6.23e-29,9;UBERON:0000010,1.74e-23,11;UBERON:0003126,4.70e-14,3;UBERON:0001005,4.70e-14,3;UBERON:0007196,4.70e-14,3;UBERON:0001558,4.70e-14,3;UBERON:0000013,1.50e-13,3;UBERON:0000011,7.43e-13,3;UBERON:0002102,3.31e-09,7;UBERON:0004710,3.31e-09,7;UBERON:0005419,3.31e-09,7;UBERON:0005417,3.31e-09,7;UBERON:0005729,3.31e-09,7;UBERON:0010708,4.51e-08,8 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0,0,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226714680320357,0.289864488701678,0,0.679971333707751,0,0,0,0,0,0,0,0.563373679106722,0,0,0,9.95858788651585,11.6545538118545,15.1657333504435,0,0,0.148442139064825,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611036183101898,0.622034853050465,0.505445516867349,0,0,0,0.180062129805349,0.150704817835715,0,0.2562274405697,0.0937017245597288,0,1.29340795759705,1.89106080167819,0.879755620819744,1.53437012699302,0,0.348252166522167,1.02891068203972,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0.853153002140936,0.232236671860439,0.38660238396628,0.80673409849337,0.22237804384487,0,0,0.329397909448022,0.502670417600539,0,0.58489226135736,0,0,0.199141273254367,0.569003702859245,0.228497025219458,1.1270773567308,0.407302655690628,0.193952487167626,0.350679099451593,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0.405720242777006,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0,0,0.469380496577004,0,0.952174563544055,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0.94652465824877,4.68526493155966,3.66219776145758,1.19484398976276,3.11918143715352,3.96307143104365,3.23848561339915,5.55286130031493,5.92931666919785,0.321321316421807,0.283880170416537,0.35613120733451,0,0.989820737835213,0,0.728341908464944,0,0.188605079755898,0,0.614870295887855,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0,0.484393280087717,0.301564624640779,0.119372344003136,0.164140899745061,0,0.18542530201051,0.341741761595705,1.03193433981611,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,1.04544148007234,0.655087691238533,0.269728692769641,0.330613822901344,1.57053565190418,0,0,0,0,0,0,0.258319646955462,0,0.117357238645754,0.2604087696879,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0,1.73870634628971,0.187682475451182,0.915758121336325,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,1.19707462020309,0.512200817262403,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0.188626341386076,0,0.192075457214608,0.34461281373368,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.290692833264657,0.282328141245992,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0.409231043169689,0.619747364743864,0.192906610981141,0.249810577937946,0.701794825336225,0.214871054048298,0,0,0 | |||
|short_description=p2@Artn | |||
}} |
Latest revision as of 05:51, 26 September 2015
Short description: | p2@Artn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Artn_5end |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | 1bp_to_ENSMUST00000133703_5end |
EntrezGene: | Artn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 6.23e-29 | 9 |
duct epithelial cell | 4.70e-14 | 3 |
epithelial cell of tracheobronchial tree | 4.70e-14 | 3 |
branched duct epithelial cell | 4.70e-14 | 3 |
epithelial cell of lower respiratory tract | 4.70e-14 | 3 |
respiratory epithelial cell | 4.70e-14 | 3 |
tracheal epithelial cell | 4.70e-14 | 3 |
tracheoblast | 4.70e-14 | 3 |
neuron | 6.35e-09 | 33 |
neuronal stem cell | 6.35e-09 | 33 |
neuroblast | 6.35e-09 | 33 |
electrically signaling cell | 6.35e-09 | 33 |
electrically responsive cell | 2.44e-07 | 39 |
electrically active cell | 2.44e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 6.23e-29 | 9 |
peripheral nervous system | 1.74e-23 | 11 |
trachea | 4.70e-14 | 3 |
respiratory airway | 4.70e-14 | 3 |
tracheobronchial tree | 4.70e-14 | 3 |
lower respiratory tract | 4.70e-14 | 3 |
sympathetic nervous system | 1.50e-13 | 3 |
parasympathetic nervous system | 7.43e-13 | 3 |
forelimb | 3.31e-09 | 7 |
pectoral appendage | 3.31e-09 | 7 |
pectoral appendage bud | 3.31e-09 | 7 |
forelimb bud | 3.31e-09 | 7 |
forelimb/pectoral fin field | 3.31e-09 | 7 |
pectoral complex | 4.51e-08 | 8 |