FFCP PHASE1:Mm9::chr4:49460044..49460048,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=8|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:49460044..49460048,-|id=chr4:49460044..49460048,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.45e-25!130;UBERON:0000925!3.45e-25!130;UBERON:0006595!3.45e-25!130;UBERON:0001007!1.12e-24!128;UBERON:0001555!1.12e-24!128;UBERON:0007026!1.12e-24!128;UBERON:0004921!1.68e-23!126;UBERON:0004185!1.68e-23!126;UBERON:0005409!4.60e-22!59;UBERON:0000160!2.18e-19!43;UBERON:0005177!9.12e-14!85;UBERON:0009854!5.95e-13!23;UBERON:0009856!5.95e-13!23;UBERON:0002107!1.38e-12!22;UBERON:0007499!1.38e-12!22;UBERON:0006925!1.38e-12!22;UBERON:0009497!1.38e-12!22;UBERON:0000015!1.38e-12!22;UBERON:0002423!1.38e-12!22;UBERON:0006235!1.38e-12!22;UBERON:0008835!1.38e-12!22;UBERON:0003894!1.38e-12!22;UBERON:0004161!1.38e-12!22;UBERON:0008836!1.38e-12!22;UBERON:0005172!1.41e-12!49;UBERON:0005173!1.41e-12!49;UBERON:0002417!1.41e-12!49;UBERON:0000916!1.41e-12!49;UBERON:0009569!3.72e-12!66;UBERON:0002365!1.18e-09!25;UBERON:0002330!1.18e-09!25;UBERON:0000077!1.45e-09!97;UBERON:0001041!1.69e-09!92;UBERON:0002100!1.72e-09!98;UBERON:0000466!7.92e-09!79;UBERON:0003104!2.05e-08!131;UBERON:0009142!2.05e-08!131;UBERON:0000481!4.44e-08!230;UBERON:0000344!1.40e-07!15;UBERON:0004923!1.65e-07!24;UBERON:0005911!4.88e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.76e-18,31;UBERON:0005409,4.09e-18,47;UBERON:0009854,1.15e-15,23;UBERON:0009856,1.15e-15,23;UBERON:0002107,3.51e-15,22;UBERON:0007499,3.51e-15,22;UBERON:0006925,3.51e-15,22;UBERON:0009497,3.51e-15,22;UBERON:0000015,3.51e-15,22;UBERON:0002423,3.51e-15,22;UBERON:0006235,3.51e-15,22;UBERON:0008835,3.51e-15,22;UBERON:0003894,3.51e-15,22;UBERON:0004161,3.51e-15,22;UBERON:0008836,3.51e-15,22;UBERON:0001007,2.04e-13,116;UBERON:0001555,2.04e-13,116;UBERON:0007026,2.04e-13,116;UBERON:0004119,2.17e-13,118;UBERON:0000925,2.17e-13,118;UBERON:0006595,2.17e-13,118;UBERON:0004921,2.18e-12,114;UBERON:0002365,2.28e-12,25;UBERON:0002330,2.28e-12,25;UBERON:0000344,1.75e-09,15;UBERON:0005172,5.76e-09,49;UBERON:0005173,5.76e-09,49;UBERON:0002417,5.76e-09,49;UBERON:0000916,5.76e-09,49;UBERON:0001242,3.24e-08,13;UBERON:0001262,3.24e-08,13;UBERON:0004786,3.24e-08,13;UBERON:0005177,5.78e-08,79|phase1_expression=0.160148847104794,4.88565570695105,9.09998478779072,4.83942738090928,8.01433167914156,4.19698179779725,5.60670337429262,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.97651515528744,0,0,10.0795226359846,12.15869189656,11.4846392823004,8.18447792702242,9.26526300549323,20.7125527207448,5.54466285471848,3.99114919179548,0,0,0,7.51014211353314,13.1325369833209,7.55426618170766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0.186399445825301,0.075726193333184,0,7.53647670624362,18.9293252935905,6.79971333707751,96.6068713031693,84.470934268197,17.4730485967961,19.9431076587088,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0.505524445014783,30.487095884989,0,0.148442139064825,0.173485326766136,0.608930956624282,0.691846491768175,0.60289056221049,0.470354828542819,1.38233250462643,11.8653584512499,0,0,0.161766849947409,0,1.45462575940567,5.59175283654366,0.292780797011547,0.41889341362691,16.860165643767,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0.305518091550949,0.124406970610093,3.53811861807145,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0.776110112217047,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,14.8688452342709,22.2138475997377,0.213288250535234,0.696710015581316,2.06187938115349,18.3532007407242,20.6811580775729,21.6857213768317,31.7934471234823,47.9273958246872,44.2349967488474,30.6392966943372,35.678427942799,44.0421510240569,36.743468478698,35.248005366023,0,0.456994050438915,1.1270773567308,1.4255592949172,1.93952487167626,2.52488951605147,9.16929788301731,33.2122832954105,48.3556081751434,36.2787661930094,103.461966853415,0.500535317148282,1.37591296579242,2.02375901146368,3.65148218499305,3.85883455603867,10.9489116266011,21.28951417136,9.56597837972709,57.383335356309,130.829067939893,62.8918201559771,104.532620493378,126.289438973556,148.899853223187,88.2871644094962,0.369506380333209,0.189491411770485,0.162964976442026,0.169745085775188,0.938760993154008,0.167506257441816,0.476087281772027,0.390267295715598,0.630540576424764,0.44292937929755,0.797273843287435,0.983179888294428,0.690739927463582,1.15719246865209,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.712262414669021,0,0.329940245945071,0,2.18502572539483,2.41858845571801,8.29862350925952,5.02013217897314,3.68922177532713,9.30341855405596,9.08834323693764,9.9819265947722,8.21695570633122,13.7044191147498,17.5330423521918,0,0.18006109403131,0.646793418913773,0,0.177340233642274,0.713475270408282,0.329098041204242,0.913394847343798,0.938686832254841,1.48282449604674,0.661585194164886,0,0,0,0,0,34.3947387223224,0.18542530201051,0.170870880797853,0.206386867963223,0.370389054739423,0.188368457004691,0.820165366326151,0.686334519619568,0,0,0,21.9574242143476,0,1.42323626988794,5.40026704109006,3.13632444021703,9.82631536857799,10.9240120571705,9.91841468704031,11.2555055053133,24.2380000055653,0,0,0,0,0,0,0,0.117357238645754,0.651021924219751,0.104859344425711,0.483168241652012,0,0,0.202725215290164,0.308132871494482,0.389762468933385,0.179026695667481,0.198681354781265,0.120195449519969,0,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0,0.19318959403219,1.68914227906064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.512200817262403,1.21553358534147,0.628839487883947,1.47074806760011,3.11145418922261,3.7086310303001,3.20919209591815,2.02157769411038,1.52087579934144,1.32038438970253,2.06011316433741,2.11283002936069,1.7230640686684,1.42888107384922,1.73826488917283,1.15745532278223,1.23625770240992,0.883193520806384,4.11443102862498,1.59728225543404,1.43061713968393,2.76158191601424,1.50575008664529,3.72304274723377,2.74391959309159,1.8414879800649,3.12349461845482,1.68342681497322,1.89816028998679,2.06859412988683,0.818462086339379,1.70430525304563,1.92906610981141,0,3.97683734357194,1.50409737833809,0,0,0|short_description=p@chr4:49460044..49460048,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:49460044..49460048,- | |||
|description=CAGE_peak_at_chr4:49460044..49460048,- | |||
|id=chr4:49460044..49460048,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.45e-25!130;UBERON:0000925!3.45e-25!130;UBERON:0006595!3.45e-25!130;UBERON:0001007!1.12e-24!128;UBERON:0001555!1.12e-24!128;UBERON:0007026!1.12e-24!128;UBERON:0004921!1.68e-23!126;UBERON:0004185!1.68e-23!126;UBERON:0005409!4.60e-22!59;UBERON:0000160!2.18e-19!43;UBERON:0005177!9.12e-14!85;UBERON:0009854!5.95e-13!23;UBERON:0009856!5.95e-13!23;UBERON:0002107!1.38e-12!22;UBERON:0007499!1.38e-12!22;UBERON:0006925!1.38e-12!22;UBERON:0009497!1.38e-12!22;UBERON:0000015!1.38e-12!22;UBERON:0002423!1.38e-12!22;UBERON:0006235!1.38e-12!22;UBERON:0008835!1.38e-12!22;UBERON:0003894!1.38e-12!22;UBERON:0004161!1.38e-12!22;UBERON:0008836!1.38e-12!22;UBERON:0005172!1.41e-12!49;UBERON:0005173!1.41e-12!49;UBERON:0002417!1.41e-12!49;UBERON:0000916!1.41e-12!49;UBERON:0009569!3.72e-12!66;UBERON:0002365!1.18e-09!25;UBERON:0002330!1.18e-09!25;UBERON:0000077!1.45e-09!97;UBERON:0001041!1.69e-09!92;UBERON:0002100!1.72e-09!98;UBERON:0000466!7.92e-09!79;UBERON:0003104!2.05e-08!131;UBERON:0009142!2.05e-08!131;UBERON:0000481!4.44e-08!230;UBERON:0000344!1.40e-07!15;UBERON:0004923!1.65e-07!24;UBERON:0005911!4.88e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.76e-18,31;UBERON:0005409,4.09e-18,47;UBERON:0009854,1.15e-15,23;UBERON:0009856,1.15e-15,23;UBERON:0002107,3.51e-15,22;UBERON:0007499,3.51e-15,22;UBERON:0006925,3.51e-15,22;UBERON:0009497,3.51e-15,22;UBERON:0000015,3.51e-15,22;UBERON:0002423,3.51e-15,22;UBERON:0006235,3.51e-15,22;UBERON:0008835,3.51e-15,22;UBERON:0003894,3.51e-15,22;UBERON:0004161,3.51e-15,22;UBERON:0008836,3.51e-15,22;UBERON:0001007,2.04e-13,116;UBERON:0001555,2.04e-13,116;UBERON:0007026,2.04e-13,116;UBERON:0004119,2.17e-13,118;UBERON:0000925,2.17e-13,118;UBERON:0006595,2.17e-13,118;UBERON:0004921,2.18e-12,114;UBERON:0002365,2.28e-12,25;UBERON:0002330,2.28e-12,25;UBERON:0000344,1.75e-09,15;UBERON:0005172,5.76e-09,49;UBERON:0005173,5.76e-09,49;UBERON:0002417,5.76e-09,49;UBERON:0000916,5.76e-09,49;UBERON:0001242,3.24e-08,13;UBERON:0001262,3.24e-08,13;UBERON:0004786,3.24e-08,13;UBERON:0005177,5.78e-08,79 | |||
|phase1_expression=0.160148847104794,4.88565570695105,9.09998478779072,4.83942738090928,8.01433167914156,4.19698179779725,5.60670337429262,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.97651515528744,0,0,10.0795226359846,12.15869189656,11.4846392823004,8.18447792702242,9.26526300549323,20.7125527207448,5.54466285471848,3.99114919179548,0,0,0,7.51014211353314,13.1325369833209,7.55426618170766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0.186399445825301,0.075726193333184,0,7.53647670624362,18.9293252935905,6.79971333707751,96.6068713031693,84.470934268197,17.4730485967961,19.9431076587088,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0.505524445014783,30.487095884989,0,0.148442139064825,0.173485326766136,0.608930956624282,0.691846491768175,0.60289056221049,0.470354828542819,1.38233250462643,11.8653584512499,0,0,0.161766849947409,0,1.45462575940567,5.59175283654366,0.292780797011547,0.41889341362691,16.860165643767,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0.305518091550949,0.124406970610093,3.53811861807145,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0.776110112217047,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,14.8688452342709,22.2138475997377,0.213288250535234,0.696710015581316,2.06187938115349,18.3532007407242,20.6811580775729,21.6857213768317,31.7934471234823,47.9273958246872,44.2349967488474,30.6392966943372,35.678427942799,44.0421510240569,36.743468478698,35.248005366023,0,0.456994050438915,1.1270773567308,1.4255592949172,1.93952487167626,2.52488951605147,9.16929788301731,33.2122832954105,48.3556081751434,36.2787661930094,103.461966853415,0.500535317148282,1.37591296579242,2.02375901146368,3.65148218499305,3.85883455603867,10.9489116266011,21.28951417136,9.56597837972709,57.383335356309,130.829067939893,62.8918201559771,104.532620493378,126.289438973556,148.899853223187,88.2871644094962,0.369506380333209,0.189491411770485,0.162964976442026,0.169745085775188,0.938760993154008,0.167506257441816,0.476087281772027,0.390267295715598,0.630540576424764,0.44292937929755,0.797273843287435,0.983179888294428,0.690739927463582,1.15719246865209,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.712262414669021,0,0.329940245945071,0,2.18502572539483,2.41858845571801,8.29862350925952,5.02013217897314,3.68922177532713,9.30341855405596,9.08834323693764,9.9819265947722,8.21695570633122,13.7044191147498,17.5330423521918,0,0.18006109403131,0.646793418913773,0,0.177340233642274,0.713475270408282,0.329098041204242,0.913394847343798,0.938686832254841,1.48282449604674,0.661585194164886,0,0,0,0,0,34.3947387223224,0.18542530201051,0.170870880797853,0.206386867963223,0.370389054739423,0.188368457004691,0.820165366326151,0.686334519619568,0,0,0,21.9574242143476,0,1.42323626988794,5.40026704109006,3.13632444021703,9.82631536857799,10.9240120571705,9.91841468704031,11.2555055053133,24.2380000055653,0,0,0,0,0,0,0,0.117357238645754,0.651021924219751,0.104859344425711,0.483168241652012,0,0,0.202725215290164,0.308132871494482,0.389762468933385,0.179026695667481,0.198681354781265,0.120195449519969,0,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0,0.19318959403219,1.68914227906064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.512200817262403,1.21553358534147,0.628839487883947,1.47074806760011,3.11145418922261,3.7086310303001,3.20919209591815,2.02157769411038,1.52087579934144,1.32038438970253,2.06011316433741,2.11283002936069,1.7230640686684,1.42888107384922,1.73826488917283,1.15745532278223,1.23625770240992,0.883193520806384,4.11443102862498,1.59728225543404,1.43061713968393,2.76158191601424,1.50575008664529,3.72304274723377,2.74391959309159,1.8414879800649,3.12349461845482,1.68342681497322,1.89816028998679,2.06859412988683,0.818462086339379,1.70430525304563,1.92906610981141,0,3.97683734357194,1.50409737833809,0,0,0 | |||
|short_description=p@chr4:49460044..49460048,- | |||
}} |
Latest revision as of 13:56, 5 August 2015
Short description: | p@chr4:49460044..49460048, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:49460044..49460048, - |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.76e-18 | 31 |
gastrointestinal system | 4.09e-18 | 47 |
digestive tract diverticulum | 1.15e-15 | 23 |
sac | 1.15e-15 | 23 |
liver | 3.51e-15 | 22 |
epithelial sac | 3.51e-15 | 22 |
digestive gland | 3.51e-15 | 22 |
epithelium of foregut-midgut junction | 3.51e-15 | 22 |
anatomical boundary | 3.51e-15 | 22 |
hepatobiliary system | 3.51e-15 | 22 |
foregut-midgut junction | 3.51e-15 | 22 |
hepatic diverticulum | 3.51e-15 | 22 |
liver primordium | 3.51e-15 | 22 |
septum transversum | 3.51e-15 | 22 |
liver bud | 3.51e-15 | 22 |
digestive system | 2.04e-13 | 116 |
digestive tract | 2.04e-13 | 116 |
primitive gut | 2.04e-13 | 116 |
endoderm-derived structure | 2.17e-13 | 118 |
endoderm | 2.17e-13 | 118 |
presumptive endoderm | 2.17e-13 | 118 |
subdivision of digestive tract | 2.18e-12 | 114 |
exocrine gland | 2.28e-12 | 25 |
exocrine system | 2.28e-12 | 25 |
mucosa | 1.75e-09 | 15 |
abdomen element | 5.76e-09 | 49 |
abdominal segment element | 5.76e-09 | 49 |
abdominal segment of trunk | 5.76e-09 | 49 |
abdomen | 5.76e-09 | 49 |
intestinal mucosa | 3.24e-08 | 13 |
wall of intestine | 3.24e-08 | 13 |
gastrointestinal system mucosa | 3.24e-08 | 13 |
trunk region element | 5.78e-08 | 79 |