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FFCP PHASE1:Mm9::chr4:86221700..86221711,+: Difference between revisions

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{{FFCP|EntrezGene=68441|HGNC=|MCL_coexpression_id=2843|UniProt=Q80X95|association_with_transcript=123bp_to_ENSMUST00000091064,NM_178376,uc008tlw.2_5end|description=CAGE_peak_6_at_Rraga_5end|id=chr4:86221700..86221711,+|ontology_enrichment_celltype=CL:0000540!2.62e-08!33;CL:0000047!2.62e-08!33;CL:0000031!2.62e-08!33;CL:0000404!2.62e-08!33;CL:0000393!4.68e-07!39;CL:0000211!4.68e-07!39|ontology_enrichment_celltype_v019_2=CL:0000349,9.12e-09,3;CL:0000351,9.12e-09,3;CL:0000107,9.28e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.05e-09!102;UBERON:0000924!1.05e-09!102;UBERON:0006601!1.05e-09!102;UBERON:0002346!3.37e-07!71;UBERON:0003075!3.37e-07!71;UBERON:0007284!3.37e-07!71;UBERON:0000010!4.49e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.84e-12,11;UBERON:0000358,9.12e-09,3;UBERON:0000307,9.12e-09,3;UBERON:0007010,9.12e-09,3;UBERON:0002410,9.28e-09,9;UBERON:0005085,1.25e-07,13|phase1_expression=0.640595388419176,0,0.454999239389536,0,0,0.33575854382378,0.467225281191051,0.387369970324729,0.84473233291,0.70219357896598,0,0.0797721589953364,0.856003649656029,0.34968160967599,0.333109761815663,0,0,0.630924330716475,0.548457734422955,0.84877930359606,0,0.496454756004426,0.783599367416806,0.319984845586813,0.68822784320151,0,0,0.215471232685889,0.570070258369122,0.252030129759931,0.443461021310609,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0.367093504323363,0,0,0,0,0,0,1.00669563634642,0,1.34437519656986,0.257259436035947,0,0,0.809265843438391,1.5869729378161,0,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.768436610643109,0.414758449233911,0.810035629990144,0.630974884054146,0.571301968807607,0.662605622854841,0.244981598429908,0.383381884072945,1.83843757322004,0,0.510749352340751,0.768032666281217,0.923204014111357,0.182975287204819,0.52091337055676,0.837548997004143,0.56276261003168,0.45839474333043,0.589257170947335,0.711858403995515,0.372798891650601,1.51452386666368,1.88928900266964,0.579728977403356,0,0.679971333707751,0.539703191637817,0,0,0,0.170430322578058,0,0,0.281686839553361,0,0,0,0.432982082022428,0.760079596425296,0,0.45673551887624,0.776813650941515,0.445326417194474,0.520455980298408,0.608930956624282,0.922461989024234,0.301445281105245,0.823120949949934,0.376999773989026,0.494389935468748,0.144599356919912,0,0.161766849947409,0,0,1.86391761218122,0.585561594023094,1.04723353406728,0,0.11981512450592,1.19980546198682,0.254140454146129,0.149790639404823,0.457500602818626,0.502617408451458,0.347648640384553,0.511430914660661,0.83115217823824,0.811206315338788,0.407357455401265,0.124406970610093,1.26361379216837,1.05220927943237,1.43132487258974,1.37941262660084,0.720248519221397,0.90422890701429,1.2246569847239,0.512454881139399,0.562210347358373,1.03481348295606,1.94011193639558,0.567318240503458,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0,0.398068533636986,0,1.02939162845886,0.568326998791185,0.621377317606506,0,0.540186184383045,0,0,0.308534225774757,0,0.268273401399619,0.233530684734339,0,0,0.162137619091711,0,0.219550115291051,0.134206418760372,0.420579897128254,0.720332286654991,0,0,0,0.232236671860439,0.38660238396628,0,0.22237804384487,0.190225626112559,0.949058123089023,0,0,0.198956472041151,0,0,0.432276099749388,0.199141273254367,1.32767530667157,0.571242563048644,2.25415471346161,0.407302655690628,0.387904974335251,0.561086559122548,0.252946148497029,0.147610147979602,0.31399745568275,0.493588655687202,0.592905254174298,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0.482354319504834,0,0,0.810676133875177,0.549122826376163,0,1.48856379067401,0.624075346229121,0.505157755894224,0,0.482443521363367,0.369506380333209,0.568474235311454,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0,0.390267295715598,0.157635144106191,0.221464689648775,0,0,0,0,0,0,11.3105782794378,2.48343071674259,0.80275294993896,0.820481806145422,2.95082901678016,0,1.26203287766503,1.95219372148319,0.861693590931196,1.43381278771531,0.668396022247182,1.13230612315533,2.83367491172426,0.584511715822624,1.58115111178609,0.321321316421807,0.141940085208269,0.35613120733451,0.81443479676788,0.659880491890142,1.32745138339963,0,0.302323556964751,0.188605079755898,0.590603785761546,0,0,1.81766864738753,1.06949213515416,0,0,0,0.680879211507576,0.18006109403131,0.258717367565509,0.214337035031592,0.709360934569094,0.178368817602071,0.329098041204242,0,3.75474732901937,2.75381692122966,0.441056796109924,0,0.161464426695906,0.361877549568935,0.238744688006273,0.164140899745061,0.291480836629851,1.29797711407357,0.683483523191411,0.206386867963223,0.185194527369712,0,0.410082683163076,0.457556346413045,0.339956859987711,0.559805809294632,0.138199973804424,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0.247960367176008,0.26175594198403,0,0,0.56369293868419,0.598066184175915,0.330916980914195,0,0,0,0.117357238645754,0,0.209718688851422,0.241584120826006,0.576060012515731,0.316011120628178,0,0,0.51968329191118,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0.233753804363138,0,6.21560669447381,9.68909651382338,7.38692312001945,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,1.50471631210609,0,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0,0,0,1.03552062350364,0.93408612825759,0.399024873401031,0.170733605754134,0.729320151204882,0,0,0.44449345560323,0,0,0.505394423527595,0,0.188626341386076,0.37456602987953,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0.578727661391115,0.824171801606613,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p6@Rraga}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=68441
|HGNC=
|MCL_coexpression_id=2843
|TSSclassifier=NA
|UniProt=Q80X95
|association_with_transcript=123bp_to_ENSMUST00000091064,NM_178376,uc008tlw.2_5end
|cluster_id=chr4:86221700..86221711,+
|description=CAGE_peak_6_at_Rraga_5end
|id=chr4:86221700..86221711,+
|ontology_enrichment_celltype=CL:0000540!2.62e-08!33;CL:0000047!2.62e-08!33;CL:0000031!2.62e-08!33;CL:0000404!2.62e-08!33;CL:0000393!4.68e-07!39;CL:0000211!4.68e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000349,9.12e-09,3;CL:0000351,9.12e-09,3;CL:0000107,9.28e-09,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.05e-09!102;UBERON:0000924!1.05e-09!102;UBERON:0006601!1.05e-09!102;UBERON:0002346!3.37e-07!71;UBERON:0003075!3.37e-07!71;UBERON:0007284!3.37e-07!71;UBERON:0000010!4.49e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.84e-12,11;UBERON:0000358,9.12e-09,3;UBERON:0000307,9.12e-09,3;UBERON:0007010,9.12e-09,3;UBERON:0002410,9.28e-09,9;UBERON:0005085,1.25e-07,13
|phase1_expression=0.640595388419176,0,0.454999239389536,0,0,0.33575854382378,0.467225281191051,0.387369970324729,0.84473233291,0.70219357896598,0,0.0797721589953364,0.856003649656029,0.34968160967599,0.333109761815663,0,0,0.630924330716475,0.548457734422955,0.84877930359606,0,0.496454756004426,0.783599367416806,0.319984845586813,0.68822784320151,0,0,0.215471232685889,0.570070258369122,0.252030129759931,0.443461021310609,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0.367093504323363,0,0,0,0,0,0,1.00669563634642,0,1.34437519656986,0.257259436035947,0,0,0.809265843438391,1.5869729378161,0,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.768436610643109,0.414758449233911,0.810035629990144,0.630974884054146,0.571301968807607,0.662605622854841,0.244981598429908,0.383381884072945,1.83843757322004,0,0.510749352340751,0.768032666281217,0.923204014111357,0.182975287204819,0.52091337055676,0.837548997004143,0.56276261003168,0.45839474333043,0.589257170947335,0.711858403995515,0.372798891650601,1.51452386666368,1.88928900266964,0.579728977403356,0,0.679971333707751,0.539703191637817,0,0,0,0.170430322578058,0,0,0.281686839553361,0,0,0,0.432982082022428,0.760079596425296,0,0.45673551887624,0.776813650941515,0.445326417194474,0.520455980298408,0.608930956624282,0.922461989024234,0.301445281105245,0.823120949949934,0.376999773989026,0.494389935468748,0.144599356919912,0,0.161766849947409,0,0,1.86391761218122,0.585561594023094,1.04723353406728,0,0.11981512450592,1.19980546198682,0.254140454146129,0.149790639404823,0.457500602818626,0.502617408451458,0.347648640384553,0.511430914660661,0.83115217823824,0.811206315338788,0.407357455401265,0.124406970610093,1.26361379216837,1.05220927943237,1.43132487258974,1.37941262660084,0.720248519221397,0.90422890701429,1.2246569847239,0.512454881139399,0.562210347358373,1.03481348295606,1.94011193639558,0.567318240503458,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0,0.398068533636986,0,1.02939162845886,0.568326998791185,0.621377317606506,0,0.540186184383045,0,0,0.308534225774757,0,0.268273401399619,0.233530684734339,0,0,0.162137619091711,0,0.219550115291051,0.134206418760372,0.420579897128254,0.720332286654991,0,0,0,0.232236671860439,0.38660238396628,0,0.22237804384487,0.190225626112559,0.949058123089023,0,0,0.198956472041151,0,0,0.432276099749388,0.199141273254367,1.32767530667157,0.571242563048644,2.25415471346161,0.407302655690628,0.387904974335251,0.561086559122548,0.252946148497029,0.147610147979602,0.31399745568275,0.493588655687202,0.592905254174298,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0.482354319504834,0,0,0.810676133875177,0.549122826376163,0,1.48856379067401,0.624075346229121,0.505157755894224,0,0.482443521363367,0.369506380333209,0.568474235311454,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0,0.390267295715598,0.157635144106191,0.221464689648775,0,0,0,0,0,0,11.3105782794378,2.48343071674259,0.80275294993896,0.820481806145422,2.95082901678016,0,1.26203287766503,1.95219372148319,0.861693590931196,1.43381278771531,0.668396022247182,1.13230612315533,2.83367491172426,0.584511715822624,1.58115111178609,0.321321316421807,0.141940085208269,0.35613120733451,0.81443479676788,0.659880491890142,1.32745138339963,0,0.302323556964751,0.188605079755898,0.590603785761546,0,0,1.81766864738753,1.06949213515416,0,0,0,0.680879211507576,0.18006109403131,0.258717367565509,0.214337035031592,0.709360934569094,0.178368817602071,0.329098041204242,0,3.75474732901937,2.75381692122966,0.441056796109924,0,0.161464426695906,0.361877549568935,0.238744688006273,0.164140899745061,0.291480836629851,1.29797711407357,0.683483523191411,0.206386867963223,0.185194527369712,0,0.410082683163076,0.457556346413045,0.339956859987711,0.559805809294632,0.138199973804424,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0.247960367176008,0.26175594198403,0,0,0.56369293868419,0.598066184175915,0.330916980914195,0,0,0,0.117357238645754,0,0.209718688851422,0.241584120826006,0.576060012515731,0.316011120628178,0,0,0.51968329191118,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0.233753804363138,0,6.21560669447381,9.68909651382338,7.38692312001945,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,1.50471631210609,0,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0,0,0,1.03552062350364,0.93408612825759,0.399024873401031,0.170733605754134,0.729320151204882,0,0,0.44449345560323,0,0,0.505394423527595,0,0.188626341386076,0.37456602987953,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0.578727661391115,0.824171801606613,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421
|short_description=p6@Rraga
}}

Latest revision as of 06:20, 27 September 2015

Short description:p6@Rraga
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Rraga_5end
Coexpression cluster:MCL_coexpression_mm9:2843
Association with transcript: 123bp_to_ENSMUST00000091064, NM_178376, uc008tlw.2_5end
EntrezGene:Rraga
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Rraga

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D91.51
Mouse Schwann, donor2.CNhs12573.11746-123F91.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B611.31
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.69
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.39
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
extraembryonic cell9.12e-093
trophoblast cell9.12e-093
autonomic neuron9.28e-099

Uber anatomy
Ontology termp-valuen
peripheral nervous system1.84e-1211
blastocyst9.12e-093
blastula9.12e-093
cleaving embryo9.12e-093
autonomic nervous system9.28e-099
ectodermal placode1.25e-0713
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