FFCP PHASE1:Hg19::chr8:74207392..74207440,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=157506 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19975 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=127bp_to_uc003xzi.2_5end | |||
|cluster_id=chr8:74207392..74207440,+ | |||
|description=CAGE_peak_5_at_RDH10_5end | |||
|id=chr8:74207392..74207440,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.53e-21!254;CL:0000223!1.04e-08!59;CL:0002076!3.30e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000197;1.42e-07;6!CL:0000098;1.42e-07;6!CL:0002167;1.42e-07;6!CL:0002251;7.24e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.52e-10,253;CL:0000223,1.34e-09,58;CL:0002076,2.12e-08,42;CL:0000197,1.50e-07,6;CL:0000098,1.50e-07,6;CL:0002167,1.50e-07,6;CL:0002251,4.85e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.71e-09!106;DOID:0050687!2.67e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;8.00e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.14e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.68e-18!169;UBERON:0000925!7.68e-18!169;UBERON:0006595!7.68e-18!169;UBERON:0001007!1.05e-15!155;UBERON:0001555!1.05e-15!155;UBERON:0007026!1.05e-15!155;UBERON:0004921!1.01e-14!129;UBERON:0004185!1.01e-14!129;UBERON:0000077!4.56e-12!130;UBERON:0009569!2.35e-09!113;UBERON:0005911!1.27e-08!82;UBERON:0001041!1.58e-08!98;UBERON:0006554!1.43e-07!44;UBERON:0003064!2.02e-07!37;UBERON:0000466!2.25e-07!126;UBERON:0005153!3.56e-07!37;UBERON:0001008!4.11e-07!45;UBERON:0005157!6.49e-07!51;UBERON:0003929!8.10e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.67e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.51e-11,160;UBERON:0000925,2.51e-11,160;UBERON:0006595,2.51e-11,160;UBERON:0004921,8.93e-11,118;UBERON:0001007,2.38e-10,145;UBERON:0001555,2.38e-10,145;UBERON:0007026,2.38e-10,145 | |||
|phase1_expression=0.726713517082227,0.642301571672949,0.704772020479856,2.00146596706261,0,0,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0.655324116390517,0.791300934685361,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0,0,0,0,0,0,0.0787107813136792,0.393364276848904,0,0,0,0.30120591877825,1.47901604066715,0,0.284338464974843,0,0,0.200544447470142,0,0.223915474239924,0.971680998056939,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.83593247695339,0.32592226663359,0,0,1.33692548262208,0.294605907474837,0.221533894583621,0.270803863765016,0.640456598628376,0.780356085359269,0,0,0.579606171470105,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.12786256184353,1.0843174571537,0,0.434539556882471,0,0,0.378139268656271,0,0.087834785693126,0.785874452986276,0.728590576585084,1.11235332835329,0.324547393654683,0,0.531831842075461,0,0,0,0,0,1.04142150482278,0,0.419499436209906,0,0,0.516833518338658,0,0.33472061276467,0.402829317109147,0.760272105718513,0.976248230192678,0.367663080345869,0,0.267899184852239,0,0.675668882899933,0,0,0,0,0,0.436094052142534,0,0.633152558322899,0.794455084879313,0.860509862246441,0,1.12135520028461,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0.505008341862199,0.125118519871964,1.10825646193673,0,0,0.300476117813194,0.907457465280168,0.179389635688862,0.427114777637135,0.847727604638247,0,0.412210116953756,0,0.18611685633159,0,0.389748020644795,0,0.184099797284599,0.323292113637624,0,0,0.339121184620975,0.966304265816484,0.545492241181669,1.14721838155602,0.121973706129595,0,0,0,0,0,0,0,0,0,0.721879481669586,0.709840800239063,0.674338760312407,1.20505514941741,0.55146986366197,1.52515610864684,0.71181185733329,0.269662616320329,0.196221465125346,0.769494313892781,0,0,0.4115740113314,0,3.80265104465493,2.94848165003288,0.590789906681404,0.441463099414651,1.72183813960359,0,0.98775256867763,0,0.402115889646523,1.38882667737794,0,0,0,0.579652024875384,0.117408694235822,0.288732895522148,0,0.380508304469197,0.790204397959275,0,0,0,0,1.87467667973554,0.335964256397719,0.567100388969546,0.895585227028483,0.581267877027924,1.15014803749563,0.492663237895943,0.968532774145487,0,0.288239906833923,0.12624243342638,0.126995788584338,0,1.17217447210047,0,0,0,0,0.112131084345361,0,0.1466765716419,0.387815147273333,3.57656445851882,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,2.61460037580088,1.49959486773086,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0.179060963239896,0.336255431980582,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,1.87173775377726,1.07057393278297,1.41932173530541,1.17141414992713,0.300946099727719,2.27407504055985,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0.744323423456331,0.767309866440312,0.841980283299221,1.40953064181271,2.55853624533352,1.28683136914886,1.48418066444991,0.154209693802656,0.532685175939381,0.164254312027618,0,0.116210378459959,1.20859449591622,1.60405176242628,1.93370076765382,1.26295892981067,0.364182336013434,1.70461739447251,0.451199612907412,0.539107359730903,0.784349769176855,1.46139224653261,0.844413031143006,1.13733384070897,0.680374821106063,0,0,0.270946437543853,0,1.52925763827023,4.98645605357235,0.223874754722178,0,0,0.512900250232778,1.96808787419823,0.650756789328606,1.13345112812495,0.183138929636687,0,1.14853107599234,0,1.6068392984416,0.096670718292122,0,0,0.275673144969061,0,0,0,0.178064071293475,1.65284915360978,0.576570202095319,0.638063562472921,1.6185244936888,0,3.1481234683064,0.6970372701606,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,0.42793898803392,0.318203247925937,0,0.359744915166629,0.274537029736055,0,0,0,0,0,0.731140468893853,1.05650146756755,0.818999468447914,0.989838023675989,1.13008116620243,0.551365343546124,0,0.438450885253763,0.578775534266688,0,0,0,0,0.143411352204052,0,0,0,0.844430541190656,0.658589785919804,0,0,0.384888450902048,0,0,0.753150406214233,0.43050537267123,5.05414427002877,0.443430153536676,0,0,0.764637207142375,0,0,0,0,0,0,0,0.962479855263359,1.22520107990516,0,0,0.0711418433484141,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0,0.556812347790485,0,0,0,0,1.8714054040822,0.146508179271894,0.121360521749513,0.334330152832435,0.284136146806413,1.19372242368845,1.48482340416319,0.921482106297696,0,0.281338832821026,0.779160935160341,0,0.422250816255987,0.19924798825107,1.10513566212459,0.251932747854276,0.511343412510774,0.246169610922139,0,0.359473404589307,1.43216939740487,0,0.690503839458535,0,0,0,0.0927680981618513,0,0.260427761085233,0.787139999965761,0.724999575434793,1.2517279311405,0,0.709163045303809,0,0,0,0.885741385813839,0.1205964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| |||
|short_description=p5@RDH10 | |||
}} |
Latest revision as of 01:56, 19 September 2015
Short description: | p5@RDH10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RDH10_5end |
Coexpression cluster: | NA |
Association with transcript: | 127bp_to_uc003xzi.2_5end |
EntrezGene: | RDH10 |
HGNC: | 19975 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.52e-10 | 253 |
endodermal cell | 1.34e-09 | 58 |
endo-epithelial cell | 2.12e-08 | 42 |
receptor cell | 1.50e-07 | 6 |
sensory epithelial cell | 1.50e-07 | 6 |
olfactory epithelial cell | 1.50e-07 | 6 |
epithelial cell of alimentary canal | 4.85e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.51e-11 | 160 |
endoderm | 2.51e-11 | 160 |
presumptive endoderm | 2.51e-11 | 160 |
subdivision of digestive tract | 8.93e-11 | 118 |
digestive system | 2.38e-10 | 145 |
digestive tract | 2.38e-10 | 145 |
primitive gut | 2.38e-10 | 145 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.14e-07 | 14 |