FFCP PHASE1:Mm9::chr5:123229458..123229472,-: Difference between revisions
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{{FFCP|EntrezGene=207565|HGNC=|MCL_coexpression_id=209|UniProt=Q8C078,Q3TV45|association_with_transcript=-39bp_to_NM_001199676,NM_145358,uc008zlz.2,uc008zma.2,uc008zmc.2,uc008zmd.2,uc008zme.2_5end|description=CAGE_peak_2_at_Camkk2_5end|id=chr5:123229458..123229472,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!1.42e-08!18;UBERON:0005564!1.42e-08!18;UBERON:0004176!4.79e-08!17;UBERON:0009196!4.79e-08!17;UBERON:0009117!4.79e-08!17;UBERON:0000473!3.45e-07!14;UBERON:0003133!5.05e-07!24;UBERON:0003135!9.03e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0000991,1.81e-11,18;UBERON:0005564,1.81e-11,18;UBERON:0004176,1.20e-10,17;UBERON:0009196,1.20e-10,17;UBERON:0009117,1.20e-10,17;UBERON:0000473,2.21e-10,14;UBERON:0003135,2.10e-09,15;UBERON:0003133,3.60e-09,24;UBERON:0002021,4.78e-09,10;UBERON:0000411,4.78e-09,10;UBERON:0001950,4.78e-09,10;UBERON:0003101,1.49e-08,16;UBERON:0000079,1.49e-08,16;UBERON:0005156,4.94e-08,26;UBERON:0000990,4.94e-08,26|phase1_expression=0.80074423552397,0,0,0,0.500895729946347,0.16787927191189,0,0.129123323441576,5.91312633037,7.49006484230379,1.71217968225505,2.6324812468461,0.513602189793617,0.437102012094987,0.666219523631325,0.202475267389826,0.699561878128147,0.788655413395594,0.685572168028694,1.27316895539409,2.12608225377674,2.18440092641948,2.87319768052829,0,0.22940928106717,0,0,0,0,0,0,3.17515336729816,0.61506478758457,0,0,0,0.408338712524738,0,2.3440060335714,4.18818995179039,1.76469446409304,3.41522742479223,2.91306211818692,0.377690453926732,0.608261587317087,0.550640256485045,0,0.872100625521786,4.39372365468944,0.972149495371417,0.979904951377538,0,0.838913030288682,2.17608642603403,0.672187598284928,0.771778308107841,1.71920063963254,0.515672092277442,0.606949382578793,0,0.633831403506179,0.677689064138264,0,0.449949858640699,0,1.4209602298922,1.19840044207362,0.384218305321555,0.725827286159344,0.405017814995072,0,0.285650984403804,0.220868540951614,0.489963196859816,0.191690942036473,0,0,0.255374676170375,0.614426133024974,0.263772575460388,0.365950574409639,0,1.3959149950069,0,0.30559649555362,0,0,0,0.37863096666592,0.302286240427142,0,0,0,0,0.649776417447669,0.896053774194671,0.702222100658759,0.511290967734173,0,0.70667914902068,0.14084341977668,3.84979432242953,0,0,0,0,0,0.34255163915718,0.258937883647172,0.445326417194474,2.08182392119363,3.04465478312141,1.15307748628029,1.3565037649736,1.05829836422134,0.628332956648377,2.96633961281249,1.01219549843938,3.5384422077995,0.161766849947409,1.76673214768315,1.45462575940567,1.86391761218122,0.585561594023094,1.67557365450764,0.255457055208591,2.75574786363617,0.599902730993408,2.41433431438823,0.149790639404823,3.20250421973039,0.125654352112864,1.21677024134594,5.37002460393694,0.41557608911912,1.78465389374533,1.01839363850316,0.870848794270651,0.505445516867349,0,0.520481771850815,0.229902104433473,0.360124259610698,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0.215567992932842,0.756424320671277,0.703804496655795,0.657587197282725,0.834141747676794,0,0.61734640922383,3.18454826909589,1.40442637462647,0.772043721344145,2.84163499395593,0.207125772535502,0.469052119962192,0.180062061461015,0.710234206755631,0.393528463494808,0.462801338662135,0.465067889500816,0,0.233530684734339,0.329119699826961,0.32833492815819,0.405344047729279,0,0.219550115291051,0,0.630869845692382,0.514523061896422,0,0,1.06644125267617,0.232236671860439,0.38660238396628,0.605050573870028,0.22237804384487,0.190225626112559,1.42358718463353,0.329397909448022,0.251335208800269,0.994782360205754,0.38992817423824,0,0,0,0.569003702859245,1.37098215131675,3.38123207019241,1.01825663922657,1.55161989734101,1.33258057791605,0.822074982615345,1.03327103585722,1.09899109488962,0.740382983530803,0,0.500535317148282,0.196558995113203,0.674586337154561,0.811440485554012,0.482354319504834,0.25462585178142,0.863088412352432,0.324270453550071,0.823684239564244,0,0.372140947668503,1.24815069245824,0.252578877947112,1.07638448113147,0,0.923765950833023,0.568474235311454,0.488894929326078,1.18821560042632,0,0.167506257441816,0.238043640886014,0.975668239288994,0.630540576424764,0.8858587585951,0.478364305972461,0.655453258862952,0.345369963731791,0.289298117163023,6.03165135757089,9.24639662491806,1.47529281905711,0.275936746304732,0,0,0.327869890753351,0.252470927204373,0,0.390438744296638,1.07711698866399,2.38968797952552,2.67358408898873,2.26461224631066,0.809621403349789,0.584511715822624,1.18586333383957,1.92792789853084,3.97432238583152,1.24645922567079,0.977321756121456,0.329940245945071,1.32745138339963,0.242780636154981,0.302323556964751,0.188605079755898,0,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,0,1.05418608574999,2.06271086496374,0,0.18006109403131,0.258717367565509,0.643011105094777,0.532020700926821,0.713475270408282,0.164549020602121,0,1.17335854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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=207565 | |||
|HGNC= | |||
|MCL_coexpression_id=209 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C078,Q3TV45 | |||
|association_with_transcript=-39bp_to_NM_001199676,NM_145358,uc008zlz.2,uc008zma.2,uc008zmc.2,uc008zmd.2,uc008zme.2_5end | |||
|cluster_id=chr5:123229458..123229472,- | |||
|description=CAGE_peak_2_at_Camkk2_5end | |||
|id=chr5:123229458..123229472,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.42e-08!18;UBERON:0005564!1.42e-08!18;UBERON:0004176!4.79e-08!17;UBERON:0009196!4.79e-08!17;UBERON:0009117!4.79e-08!17;UBERON:0000473!3.45e-07!14;UBERON:0003133!5.05e-07!24;UBERON:0003135!9.03e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,1.81e-11,18;UBERON:0005564,1.81e-11,18;UBERON:0004176,1.20e-10,17;UBERON:0009196,1.20e-10,17;UBERON:0009117,1.20e-10,17;UBERON:0000473,2.21e-10,14;UBERON:0003135,2.10e-09,15;UBERON:0003133,3.60e-09,24;UBERON:0002021,4.78e-09,10;UBERON:0000411,4.78e-09,10;UBERON:0001950,4.78e-09,10;UBERON:0003101,1.49e-08,16;UBERON:0000079,1.49e-08,16;UBERON:0005156,4.94e-08,26;UBERON:0000990,4.94e-08,26 | |||
|phase1_expression=0.80074423552397,0,0,0,0.500895729946347,0.16787927191189,0,0.129123323441576,5.91312633037,7.49006484230379,1.71217968225505,2.6324812468461,0.513602189793617,0.437102012094987,0.666219523631325,0.202475267389826,0.699561878128147,0.788655413395594,0.685572168028694,1.27316895539409,2.12608225377674,2.18440092641948,2.87319768052829,0,0.22940928106717,0,0,0,0,0,0,3.17515336729816,0.61506478758457,0,0,0,0.408338712524738,0,2.3440060335714,4.18818995179039,1.76469446409304,3.41522742479223,2.91306211818692,0.377690453926732,0.608261587317087,0.550640256485045,0,0.872100625521786,4.39372365468944,0.972149495371417,0.979904951377538,0,0.838913030288682,2.17608642603403,0.672187598284928,0.771778308107841,1.71920063963254,0.515672092277442,0.606949382578793,0,0.633831403506179,0.677689064138264,0,0.449949858640699,0,1.4209602298922,1.19840044207362,0.384218305321555,0.725827286159344,0.405017814995072,0,0.285650984403804,0.220868540951614,0.489963196859816,0.191690942036473,0,0,0.255374676170375,0.614426133024974,0.263772575460388,0.365950574409639,0,1.3959149950069,0,0.30559649555362,0,0,0,0.37863096666592,0.302286240427142,0,0,0,0,0.649776417447669,0.896053774194671,0.702222100658759,0.511290967734173,0,0.70667914902068,0.14084341977668,3.84979432242953,0,0,0,0,0,0.34255163915718,0.258937883647172,0.445326417194474,2.08182392119363,3.04465478312141,1.15307748628029,1.3565037649736,1.05829836422134,0.628332956648377,2.96633961281249,1.01219549843938,3.5384422077995,0.161766849947409,1.76673214768315,1.45462575940567,1.86391761218122,0.585561594023094,1.67557365450764,0.255457055208591,2.75574786363617,0.599902730993408,2.41433431438823,0.149790639404823,3.20250421973039,0.125654352112864,1.21677024134594,5.37002460393694,0.41557608911912,1.78465389374533,1.01839363850316,0.870848794270651,0.505445516867349,0,0.520481771850815,0.229902104433473,0.360124259610698,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0.215567992932842,0.756424320671277,0.703804496655795,0.657587197282725,0.834141747676794,0,0.61734640922383,3.18454826909589,1.40442637462647,0.772043721344145,2.84163499395593,0.207125772535502,0.469052119962192,0.180062061461015,0.710234206755631,0.393528463494808,0.462801338662135,0.465067889500816,0,0.233530684734339,0.329119699826961,0.32833492815819,0.405344047729279,0,0.219550115291051,0,0.630869845692382,0.514523061896422,0,0,1.06644125267617,0.232236671860439,0.38660238396628,0.605050573870028,0.22237804384487,0.190225626112559,1.42358718463353,0.329397909448022,0.251335208800269,0.994782360205754,0.38992817423824,0,0,0,0.569003702859245,1.37098215131675,3.38123207019241,1.01825663922657,1.55161989734101,1.33258057791605,0.822074982615345,1.03327103585722,1.09899109488962,0.740382983530803,0,0.500535317148282,0.196558995113203,0.674586337154561,0.811440485554012,0.482354319504834,0.25462585178142,0.863088412352432,0.324270453550071,0.823684239564244,0,0.372140947668503,1.24815069245824,0.252578877947112,1.07638448113147,0,0.923765950833023,0.568474235311454,0.488894929326078,1.18821560042632,0,0.167506257441816,0.238043640886014,0.975668239288994,0.630540576424764,0.8858587585951,0.478364305972461,0.655453258862952,0.345369963731791,0.289298117163023,6.03165135757089,9.24639662491806,1.47529281905711,0.275936746304732,0,0,0.327869890753351,0.252470927204373,0,0.390438744296638,1.07711698866399,2.38968797952552,2.67358408898873,2.26461224631066,0.809621403349789,0.584511715822624,1.18586333383957,1.92792789853084,3.97432238583152,1.24645922567079,0.977321756121456,0.329940245945071,1.32745138339963,0.242780636154981,0.302323556964751,0.188605079755898,0,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,0,1.05418608574999,2.06271086496374,0,0.18006109403131,0.258717367565509,0.643011105094777,0.532020700926821,0.713475270408282,0.164549020602121,0,1.17335854031855,0.21183207086382,0.220528398054962,0.16488625294148,0.645857706783622,0.542816324353403,0.358117032009409,0.820704498725306,0.291480836629851,0,1.36696704638282,0.619160603889667,0.925972636848558,0.941842285023455,1.6403307326523,0.457556346413045,2.03974115992626,1.53946597556024,2.07299960706636,0.954670618015114,0.474503990371703,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0.0826534557253359,1.04702376793612,0.518459893167171,1.86401793926078,5.6369293868419,9.27002585472668,10.4238848987971,14.0004855607714,12.6576627008176,13.685446164753,15.0217265466565,22.7857673476913,10.3810750981454,6.03960302065015,2.59227005632079,1.89606672376907,0.608175645870493,1.1298205288131,1.81889152168913,1.43221356533985,0.993406773906324,1.08175904567972,0.443068581523732,0.807731599585181,0.609654453239999,1.00826185136841,0.974578807397524,0.577271049841977,0.818138315270983,0.453460767230423,0.665957860122194,0.986852422704233,0.671538465456314,0,1.31377732815827,0.36630324853453,0.428736758158132,0,1.6942555278512,3.22227665555024,4.01026859407578,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| |||
|short_description=p2@Camkk2 | |||
}} |
Latest revision as of 20:23, 1 October 2015
Short description: | p2@Camkk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Camkk2_5end |
Coexpression cluster: | MCL_coexpression_mm9:209 |
Association with transcript: | -39bp_to_NM_001199676, NM_145358, uc008zlz.2, uc008zma.2, uc008zmc.2, uc008zmd.2, uc008zme.2_5end |
EntrezGene: | Camkk2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gonad | 1.81e-11 | 18 |
gonad primordium | 1.81e-11 | 18 |
external genitalia | 1.20e-10 | 17 |
indifferent external genitalia | 1.20e-10 | 17 |
indifferent gonad | 1.20e-10 | 17 |
testis | 2.21e-10 | 14 |
male reproductive organ | 2.10e-09 | 15 |
reproductive organ | 3.60e-09 | 24 |
occipital lobe | 4.78e-09 | 10 |
visual cortex | 4.78e-09 | 10 |
neocortex | 4.78e-09 | 10 |
male organism | 1.49e-08 | 16 |
male reproductive system | 1.49e-08 | 16 |
reproductive structure | 4.94e-08 | 26 |
reproductive system | 4.94e-08 | 26 |