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FFCP PHASE1:Mm9::chr5:67359798..67359814,+: Difference between revisions

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{{FFCP|EntrezGene=77569|HGNC=|MCL_coexpression_id=114|UniProt=Q8CGB7|association_with_transcript=0bp_to_ENSMUST00000140428,uc008xpk.1_5end|description=CAGE_peak_3_at_Limch1_5end|id=chr5:67359798..67359814,+|ontology_enrichment_celltype=CL:0000107!2.66e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,2.78e-08,9;CL:0000221,8.81e-07,44;CL:0000133,8.81e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!4.24e-09!333;UBERON:0004121!1.08e-08!102;UBERON:0000924!1.08e-08!102;UBERON:0006601!1.08e-08!102;UBERON:0000010!6.56e-08!11;UBERON:0002410!2.66e-07!9;UBERON:0000153!2.81e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000010,5.42e-09,11;UBERON:0002410,2.78e-08,9;UBERON:0004121,1.14e-07,95;UBERON:0000924,1.14e-07,95;UBERON:0006601,1.14e-07,95;UBERON:0000026,1.63e-07,12;UBERON:0004708,1.63e-07,12;UBERON:0002101,1.63e-07,12;UBERON:0004357,1.63e-07,12;UBERON:0004347,1.63e-07,12;UBERON:0005732,1.63e-07,12;UBERON:0005733,1.63e-07,12;UBERON:0000153,1.68e-07,43;UBERON:0003102,2.59e-07,22|phase1_expression=9.28863313207805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,3.70642765846759,4.61340983742391,4.86074747685709,0.699932108126813,0,0,0,0,11.5766746216176,10.0286703978565,5.67239301505187,1.41621522601718,0,1.26766280701236,0,0,0,0,0,0,0.384218305321555,1.97010263386108,2.97013064329719,1.68259969081106,0.856952953211411,1.76694832761291,1.10241719293459,1.24599112323707,0,2.20231761998777,0.893811366596314,2.30409799884365,2.2420668914133,1.82975287204819,1.56274011167028,0.558365998002762,1.68828783009504,1.37518422999129,2.06240009831567,1.85083185038834,0.372798891650601,6.05809546665472,2.11600368298999,1.15945795480671,0,0,0,0,0,2.10666630197628,0,0,0,19.1547050896285,3.84979432242953,5.09610479413291,0,0,0,0,1.37020655662872,0.258937883647172,0,1.04091196059682,1.21786191324856,0.691846491768175,0.904335843315735,1.17588707135705,0.376999773989026,0.494389935468748,0.722996784599558,1.76922110389975,10.0295446967394,6.8460870722722,6.78825354389311,0,3.51336956413857,3.35114730901528,0,0,0,0,1.9472783122627,1.83000241127451,1.00523481690292,2.08589184230732,2.81287003063364,1.66230435647648,1.46017136760982,0.305518091550949,9.82815067819735,0,1.89397670297827,2.60240885925407,1.83921683546778,3.06105620669094,3.31550599238573,4.49040894398764,3.58718416797579,3.18585863503078,1.29351685369508,2.37124792226126,6.42960672570586,3.87092473160687,5.2606975782618,4.17070873838397,3.48252166522167,2.88094990971121,0.398068533636986,0,0,0,1.03562886267751,0.469052119962192,0.180062061461015,0.710234206755631,0,0.308534225774757,0.232533944750408,0.268273401399619,0.700592054203017,0.658239399653922,0.32833492815819,0.56748166682099,0.584799949701329,0.658650345873152,0.939444931322602,4.20579897128254,2.6755199218614,0,0.264450566663544,1.2797295032114,1.16118335930219,0.77320476793256,0.201683524623343,1.11189021922435,0,0,0.823494773620054,0,0.198956472041151,0.58489226135736,0,0.432276099749388,0.199141273254367,0.379335801906163,0.456994050438915,0,0.203651327845314,0,0.98190147846446,0.758838445491087,4.87113488332687,3.1399745568275,5.92306386824642,0,0.667380422864376,0.393117990226406,0,0,0,0.25462585178142,0,0.324270453550071,0,0,1.11642284300551,0,0,0.179397413521912,0,0.739012760666419,1.13694847062291,0.488894929326078,1.35796068620151,2.58159273117352,3.35012514883632,6.9032655856944,3.70753930929818,3.94087860265477,2.6575762757853,2.55127629851979,1.96635977658886,1.55416483679306,1.15719246865209,0,0,0.491764273019036,0.275936746304732,0.642202359951168,1.40654023910644,0,4.54447668967871,17.0374438484779,22.645447169205,26.0662311256687,8.84184552424442,5.79276552614225,4.52922449262132,15.382806663646,11.3979784585412,16.602086673754,2.24924921495265,0,0,1.30309567482861,0.494910368917606,1.32745138339963,0.728341908464944,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0.727067458955011,0,1.58018378967908,2.10837217149998,0,0.340439605753788,3.6012218806262,0.388076051348264,0.214337035031592,0.354680467284547,0.356737635204141,0.493647061806363,1.522324745573,0,3.38931313382112,1.32317038832977,1.6488625294148,2.58343082713449,2.41251699712623,3.70054266409723,2.29797259643086,0.874442509889552,2.41052892613663,1.36696704638282,0.82554747185289,0.370389054739423,0.753473828018764,0.956859594047176,1.60144721244566,0,0,0,0.954670618015114,0.632671987162271,0.813277868507395,0.324016022465404,0.418176592028937,0.218362563746178,1.07891477107857,0.41326727862668,0.785267825952089,0.388844919875379,0,0,0.299033092087958,0,0,0.387479470433193,0.168956125490778,0.469428954583016,0.39061315453185,0.314578033277133,0,0,2.21207784439725,8.10900861160657,8.01145465885653,5.1968329191118,5.19177417435696,2.18549490259391,1.80293174279953,2.95379054349154,1.71642964911851,1.143102099825,1.20991422164209,0.779663045918019,0.577271049841977,1.05189211963412,2.49403421976732,0,0,0,1.15913756419314,0,0,0.214368379079066,0.501572104035363,0.564751842617067,0.460325236507177,0.572895513439397,1.3748254587495,0,0,0.675022500231806,0,0.453142408984205,0.51776031175182,6.33102820263478,10.7736715818278,5.46347538413229,2.43106717068294,2.30574478890781,2.20612210140017,1.33348036680969,1.64828045791115,1.92551525755089,2.52697211763797,2.5347929989024,2.45214243801899,2.43467919421694,3.20125762024346,2.5845961030026,1.42888107384922,1.85414921511769,2.70072908649187,1.64834360321323,1.76638704161277,1.71434626192708,1.95223386775271,2.62279808942053,2.90692833264657,2.25862512996793,2.45382362885862,2.74391959309159,1.31534855718921,2.44447404922551,1.68342681497322,2.13543032623513,3.05363895364247,0.409231043169689,2.78886314134739,3.08650577569826,4.99621155875892,2.8071793013449,5.80151845930405,9.37312827137333,5.95596831622692,5.33296021926969|short_description=p3@Limch1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=77569
|HGNC=
|MCL_coexpression_id=114
|TSSclassifier=NA
|UniProt=Q8CGB7
|association_with_transcript=0bp_to_ENSMUST00000140428,uc008xpk.1_5end
|cluster_id=chr5:67359798..67359814,+
|description=CAGE_peak_3_at_Limch1_5end
|id=chr5:67359798..67359814,+
|ontology_enrichment_celltype=CL:0000107!2.66e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000107,2.78e-08,9;CL:0000221,8.81e-07,44;CL:0000133,8.81e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!4.24e-09!333;UBERON:0004121!1.08e-08!102;UBERON:0000924!1.08e-08!102;UBERON:0006601!1.08e-08!102;UBERON:0000010!6.56e-08!11;UBERON:0002410!2.66e-07!9;UBERON:0000153!2.81e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000010,5.42e-09,11;UBERON:0002410,2.78e-08,9;UBERON:0004121,1.14e-07,95;UBERON:0000924,1.14e-07,95;UBERON:0006601,1.14e-07,95;UBERON:0000026,1.63e-07,12;UBERON:0004708,1.63e-07,12;UBERON:0002101,1.63e-07,12;UBERON:0004357,1.63e-07,12;UBERON:0004347,1.63e-07,12;UBERON:0005732,1.63e-07,12;UBERON:0005733,1.63e-07,12;UBERON:0000153,1.68e-07,43;UBERON:0003102,2.59e-07,22
|phase1_expression=9.28863313207805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,3.70642765846759,4.61340983742391,4.86074747685709,0.699932108126813,0,0,0,0,11.5766746216176,10.0286703978565,5.67239301505187,1.41621522601718,0,1.26766280701236,0,0,0,0,0,0,0.384218305321555,1.97010263386108,2.97013064329719,1.68259969081106,0.856952953211411,1.76694832761291,1.10241719293459,1.24599112323707,0,2.20231761998777,0.893811366596314,2.30409799884365,2.2420668914133,1.82975287204819,1.56274011167028,0.558365998002762,1.68828783009504,1.37518422999129,2.06240009831567,1.85083185038834,0.372798891650601,6.05809546665472,2.11600368298999,1.15945795480671,0,0,0,0,0,2.10666630197628,0,0,0,19.1547050896285,3.84979432242953,5.09610479413291,0,0,0,0,1.37020655662872,0.258937883647172,0,1.04091196059682,1.21786191324856,0.691846491768175,0.904335843315735,1.17588707135705,0.376999773989026,0.494389935468748,0.722996784599558,1.76922110389975,10.0295446967394,6.8460870722722,6.78825354389311,0,3.51336956413857,3.35114730901528,0,0,0,0,1.9472783122627,1.83000241127451,1.00523481690292,2.08589184230732,2.81287003063364,1.66230435647648,1.46017136760982,0.305518091550949,9.82815067819735,0,1.89397670297827,2.60240885925407,1.83921683546778,3.06105620669094,3.31550599238573,4.49040894398764,3.58718416797579,3.18585863503078,1.29351685369508,2.37124792226126,6.42960672570586,3.87092473160687,5.2606975782618,4.17070873838397,3.48252166522167,2.88094990971121,0.398068533636986,0,0,0,1.03562886267751,0.469052119962192,0.180062061461015,0.710234206755631,0,0.308534225774757,0.232533944750408,0.268273401399619,0.700592054203017,0.658239399653922,0.32833492815819,0.56748166682099,0.584799949701329,0.658650345873152,0.939444931322602,4.20579897128254,2.6755199218614,0,0.264450566663544,1.2797295032114,1.16118335930219,0.77320476793256,0.201683524623343,1.11189021922435,0,0,0.823494773620054,0,0.198956472041151,0.58489226135736,0,0.432276099749388,0.199141273254367,0.379335801906163,0.456994050438915,0,0.203651327845314,0,0.98190147846446,0.758838445491087,4.87113488332687,3.1399745568275,5.92306386824642,0,0.667380422864376,0.393117990226406,0,0,0,0.25462585178142,0,0.324270453550071,0,0,1.11642284300551,0,0,0.179397413521912,0,0.739012760666419,1.13694847062291,0.488894929326078,1.35796068620151,2.58159273117352,3.35012514883632,6.9032655856944,3.70753930929818,3.94087860265477,2.6575762757853,2.55127629851979,1.96635977658886,1.55416483679306,1.15719246865209,0,0,0.491764273019036,0.275936746304732,0.642202359951168,1.40654023910644,0,4.54447668967871,17.0374438484779,22.645447169205,26.0662311256687,8.84184552424442,5.79276552614225,4.52922449262132,15.382806663646,11.3979784585412,16.602086673754,2.24924921495265,0,0,1.30309567482861,0.494910368917606,1.32745138339963,0.728341908464944,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0.727067458955011,0,1.58018378967908,2.10837217149998,0,0.340439605753788,3.6012218806262,0.388076051348264,0.214337035031592,0.354680467284547,0.356737635204141,0.493647061806363,1.522324745573,0,3.38931313382112,1.32317038832977,1.6488625294148,2.58343082713449,2.41251699712623,3.70054266409723,2.29797259643086,0.874442509889552,2.41052892613663,1.36696704638282,0.82554747185289,0.370389054739423,0.753473828018764,0.956859594047176,1.60144721244566,0,0,0,0.954670618015114,0.632671987162271,0.813277868507395,0.324016022465404,0.418176592028937,0.218362563746178,1.07891477107857,0.41326727862668,0.785267825952089,0.388844919875379,0,0,0.299033092087958,0,0,0.387479470433193,0.168956125490778,0.469428954583016,0.39061315453185,0.314578033277133,0,0,2.21207784439725,8.10900861160657,8.01145465885653,5.1968329191118,5.19177417435696,2.18549490259391,1.80293174279953,2.95379054349154,1.71642964911851,1.143102099825,1.20991422164209,0.779663045918019,0.577271049841977,1.05189211963412,2.49403421976732,0,0,0,1.15913756419314,0,0,0.214368379079066,0.501572104035363,0.564751842617067,0.460325236507177,0.572895513439397,1.3748254587495,0,0,0.675022500231806,0,0.453142408984205,0.51776031175182,6.33102820263478,10.7736715818278,5.46347538413229,2.43106717068294,2.30574478890781,2.20612210140017,1.33348036680969,1.64828045791115,1.92551525755089,2.52697211763797,2.5347929989024,2.45214243801899,2.43467919421694,3.20125762024346,2.5845961030026,1.42888107384922,1.85414921511769,2.70072908649187,1.64834360321323,1.76638704161277,1.71434626192708,1.95223386775271,2.62279808942053,2.90692833264657,2.25862512996793,2.45382362885862,2.74391959309159,1.31534855718921,2.44447404922551,1.68342681497322,2.13543032623513,3.05363895364247,0.409231043169689,2.78886314134739,3.08650577569826,4.99621155875892,2.8071793013449,5.80151845930405,9.37312827137333,5.95596831622692,5.33296021926969
|short_description=p3@Limch1
}}

Latest revision as of 04:17, 26 September 2015

Short description:p3@Limch1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Limch1_5end
Coexpression cluster:MCL_coexpression_mm9:114
Association with transcript: 0bp_to_ENSMUST00000140428, uc008xpk.1_5end
EntrezGene:Limch1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Limch1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.58
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.03
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D96.06
Mouse Schwann, donor2.CNhs12573.11746-123F92.12
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.15
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F510.03
bone (os femoris), neonate N16.CNhs11225.1525-43A66.85
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.83
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C62.60
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C64.49
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G83.19
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H26.43
forelimb, embryo E13.CNhs10589.384-1E23.87
forelimb, embryo E14.CNhs10577.413-26A85.26
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I14.87
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H15.92
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I66.90
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E53.94
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E222.65
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E326.07
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.84
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.53
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D415.38
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.40
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D616.60
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E63.60
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G33.39
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H32.41
skin, neonate N06.CNhs11097.693-20I53.70
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I48.11
thymus, embryo E15.CNhs11005.430-45I28.01
thymus, embryo E16.CNhs11002.456-26C55.20
thymus, embryo E17.CNhs10581.478-18C15.19
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C72.95
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D31.14
thymus, neonate N10.CNhs11194.748-24E41.21
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I86.33
whole body, embryo E12.CNhs10587.857-27C910.77
whole body, embryo E13.CNhs10512.372-23H25.46
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.14
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C25.80
whole body, neonate N01.CNhs10576.659-23C69.37
whole body, neonate N06.CNhs10515.692-21D15.96
whole body, neonate N10.CNhs10518.761-6B45.33





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
autonomic neuron2.78e-089
ectodermal cell8.81e-0744
neurectodermal cell8.81e-0744

Uber anatomy
Ontology termp-valuen
peripheral nervous system5.42e-0911
autonomic nervous system2.78e-089
ectoderm-derived structure1.14e-0795
ectoderm1.14e-0795
presumptive ectoderm1.14e-0795
appendage1.63e-0712
paired limb/fin1.63e-0712
limb1.63e-0712
paired limb/fin bud1.63e-0712
limb bud1.63e-0712
limb/fin field1.63e-0712
limb field1.63e-0712
anterior region of body1.68e-0743
surface structure2.59e-0722
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