FFCP PHASE1:Mm9::chr6:31513855..31513880,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=27205|HGNC=|MCL_coexpression_id=531|UniProt=Q8VIQ4,Q791G4,Q9R0M4|association_with_transcript=56bp_to_ENSMUST00000048101,NM_013723,uc009bgh.2_5end|description=CAGE_peak_1_at_Podxl_5end|id=chr6:31513855..31513880,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005177!2.91e-09!85;UBERON:0000468!1.14e-08!333;UBERON:0002048!3.01e-08!14;UBERON:0000117!3.01e-08!14;UBERON:0000171!3.01e-08!14;UBERON:0000170!3.01e-08!14;UBERON:0005597!3.01e-08!14;UBERON:0000118!3.01e-08!14;UBERON:0006554!8.40e-08!16;UBERON:0000464!1.13e-07!57;UBERON:0005153!1.43e-07!17;UBERON:0001008!1.82e-07!17;UBERON:0002113!2.30e-07!14;UBERON:0003918!2.30e-07!14;UBERON:0005095!2.30e-07!14;UBERON:0007687!2.30e-07!14;UBERON:0009569!6.59e-07!66;UBERON:0000922!7.92e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.33e-10,79;UBERON:0006554,7.31e-09,18;UBERON:0001008,1.63e-08,19;UBERON:0002048,2.77e-08,14;UBERON:0000117,2.77e-08,14;UBERON:0000171,2.77e-08,14;UBERON:0000170,2.77e-08,14;UBERON:0005597,2.77e-08,14;UBERON:0000118,2.77e-08,14;UBERON:0005153,1.32e-07,17;UBERON:0002113,2.13e-07,14;UBERON:0003918,2.13e-07,14;UBERON:0011143,2.13e-07,14;UBERON:0005095,2.13e-07,14;UBERON:0007687,2.13e-07,14;UBERON:0009569,8.11e-07,66|phase1_expression=1.92178616525753,1.39590163055744,0,0,0,0.503637815735669,0.233612640595526,0,0.281577444303333,0.468129052643987,0,0,0,0,26.3156711834374,14.7806945194573,10.4934281719222,0.157731082679119,0.137114433605739,0.42438965179803,58.8499567845403,0,0,0.159992422793407,0,1.14846392823004,1.29228598847722,1.29282739611533,0.190023419456374,0.756090389279792,0.665191531965914,5.71527606113668,5.53558308826113,15.8481681015439,0,0,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0,1.56478268869608,22.2385659508055,16.0370913396164,13.6100929351998,7.97922603264566,33.0630898039435,0.167782606057736,0,0,0.771778308107841,0.85960031981627,1.03134418455488,7.48570905180512,6.87688273053643,12.6766280701236,4.40497891689872,5.33576877666684,0,0,0,4.19440154725767,5.76327457982332,7.56934169851887,7.02030879324791,8.2026734927039,10.5690864229407,8.61387309711293,7.34944795289724,7.66763768145891,11.9498442259303,20.9220173898839,20.8130361078856,24.4234387877427,15.0350368012421,12.0763689555181,15.6274011167028,17.0301629390842,23.0732670112989,18.9469827243245,10.9012576625257,7.97281412474976,10.6247684120421,18.5529173666301,11.1845908958043,117.105253435478,16.3480536626463,0,0.539703191637817,4.54843492213368,1.34408066129201,30.8977724289854,0.340860645156116,0,0.35333957451034,2.53518155598025,0,0,0,0.865964164044856,2.28023878927589,1.51657333504435,27.6324988920125,31.0725460376606,65.0176569103932,28.104622936114,30.7510133095263,30.9024766323118,28.1851337833404,42.8022893973965,40.2133092254962,1253.27848641328,117.559277175888,15.0383793831479,18.7649545938995,28.04687284447,29.0925151881133,9.31958806090611,20.7874365878198,11.51956887474,14.0501380364725,0.239630249011841,0,0.381210681219194,27.7112682898922,49.4100651044117,6.78533501409468,26.5951209894183,14.0643501531682,23.8956251243494,12.8170597823529,63.0385662233458,19.6563013563947,19.459652399393,53.0313476833914,10.0192741081282,7.35686734187113,14.7650946440386,14.7690721479001,25.1735046859913,29.7223831060852,30.8278673801508,87.7004426805263,8.62271971731369,11.1572587299013,5.80638709741031,9.86380795924087,8.06337022754234,13.2335823278423,20.7839957772023,103.099750211979,0,0,0,47.2246761380944,30.7229138575236,24.8485644816201,33.6177524530999,30.4984559208476,30.2363541259261,33.7174219888091,38.0948229987459,45.3049528384618,44.1020397768128,77.8153779734911,140.897590990697,104.679190996538,136.340621595742,116.088552227722,21.8701546506692,15.1269780197548,0.991256348951394,13.7514294665043,65.9060694153873,63.4006114178997,60.1811044374176,78.2532075538569,79.6113396964636,69.6225791571967,20.404749646414,82.3494773620054,35.9409348584385,42.178772072724,40.552530120777,23.3693046250098,14.9135254413539,13.9398891278057,51.7793369601913,58.6094869687909,110.453580959619,120.561586084426,139.257885786355,146.583863570766,230.497177817918,193.369293853279,167.203645151064,158.441958475592,7.70776830426587,49.2193061862477,41.4739479688858,27.658039823337,18.4602710463538,12.3000351473733,12.731292589071,16.1109836972454,5.5125977103512,9.06052663520669,11.5014565221884,14.1413560114031,11.5453939052387,8.84026072814891,11.4814344654024,5.78932225636041,360.453474015046,27.0972718831793,38.7856643932022,39.0413697282933,43.1830056850844,81.5755473741643,140.207704481862,151.033443441936,142.34453512789,135.314925375401,155.627854209707,245.139518814744,188.226630233826,226.80972385581,0,0,12.2941068254759,18.2118252561123,24.72479085812,17.3473296156461,0,36.6082844446341,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0.395287777946524,18.315315036043,48.4015690560196,117.523298420388,99.6868191243886,52.2955289822937,37.1686387351896,59.4812558579705,41.7206508611356,29.4223924419201,51.3825293612545,38.4293934929909,57.3710810833451,39.9887102425256,30.658774541086,48.037587206244,39.0048851727495,36.0974401368654,21.7881347682424,14.0447653344422,19.5331612511959,22.076714608254,24.650292476276,33.1766000739851,34.3907453058433,53.2813660950549,93.6340115174204,101.46756194377,39.2540548537832,45.1788333059655,18.8913379234209,10.2531972377865,6.2073618881631,10.833299383174,26.8162369699463,27.2575193955449,6.83483523191411,56.7563886898862,30.5570970160024,3.20226376907975,13.2593400889394,5.49067615695654,0.679913719975421,0.69975726161829,0.967399816630967,45.8241896647254,50.1392549826099,35.7842262143254,24.8412283890143,16.517975385143,22.2729815021101,20.2296519577231,24.6307298061501,22.5110110106265,19.1830160471853,19.8828580187816,0.56369293868419,50.0880429247329,29.2861528109063,28.389873498231,21.4405306973034,18.4162176784948,16.5473706490513,13.020438484395,9.54220034273969,4.83168241652012,5.47257011889944,3.16011120628178,17.0289180843738,10.1683847593179,5.45667456506739,6.26593434836185,5.16571522431289,2.04332264183947,2.51072196196781,2.42319479875554,2.362411006305,3.12561173924206,3.80085734885034,1.53938946624527,1.16876902181569,85.4773546229347,122.092274355736,104.42692909343,134.979231556719,34.1945581436977,47.8590312400514,32.0515342467714,18.0069438426415,85.2672576860118,6.21227026878773,6.44455331110048,6.87474616127276,11.3423100346834,6.85082519770642,6.0431511791176,2.70009000092722,6.75481804836331,9.06284817968409,9.83744592328458,7.9916257639816,34.3161391124887,12.6342868258059,18.2330037801221,7.75568701723535,9.55986243940074,31.781282075631,30.0811183568786,35.3011130550997,30.0709681998919,34.4731847850726,29.9915882803861,28.9352258081937,32.2046516596492,30.8428468291643,33.8168520810982,26.5375106413719,26.6214724239913,30.4943566594447,25.6126121033851,32.5725789766145,31.4132176902027,28.6123427936785,29.9413618262597,26.8211734183692,29.4458835463034,26.8904120122976,26.0439014323464,28.2472556799393,30.3016826695179,32.1500899116512,27.2857416180311,28.2369419787086,32.5367366490529,27.5856453703032,12.9901500527732,29.4753826641215,31.5860449450999,19.8939865351597,27.794518809059,34.084571836202|short_description=p1@Podxl}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=27205 | |||
|HGNC= | |||
|MCL_coexpression_id=531 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VIQ4,Q791G4,Q9R0M4 | |||
|association_with_transcript=56bp_to_ENSMUST00000048101,NM_013723,uc009bgh.2_5end | |||
|cluster_id=chr6:31513855..31513880,- | |||
|description=CAGE_peak_1_at_Podxl_5end | |||
|id=chr6:31513855..31513880,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!2.91e-09!85;UBERON:0000468!1.14e-08!333;UBERON:0002048!3.01e-08!14;UBERON:0000117!3.01e-08!14;UBERON:0000171!3.01e-08!14;UBERON:0000170!3.01e-08!14;UBERON:0005597!3.01e-08!14;UBERON:0000118!3.01e-08!14;UBERON:0006554!8.40e-08!16;UBERON:0000464!1.13e-07!57;UBERON:0005153!1.43e-07!17;UBERON:0001008!1.82e-07!17;UBERON:0002113!2.30e-07!14;UBERON:0003918!2.30e-07!14;UBERON:0005095!2.30e-07!14;UBERON:0007687!2.30e-07!14;UBERON:0009569!6.59e-07!66;UBERON:0000922!7.92e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.33e-10,79;UBERON:0006554,7.31e-09,18;UBERON:0001008,1.63e-08,19;UBERON:0002048,2.77e-08,14;UBERON:0000117,2.77e-08,14;UBERON:0000171,2.77e-08,14;UBERON:0000170,2.77e-08,14;UBERON:0005597,2.77e-08,14;UBERON:0000118,2.77e-08,14;UBERON:0005153,1.32e-07,17;UBERON:0002113,2.13e-07,14;UBERON:0003918,2.13e-07,14;UBERON:0011143,2.13e-07,14;UBERON:0005095,2.13e-07,14;UBERON:0007687,2.13e-07,14;UBERON:0009569,8.11e-07,66 | |||
|phase1_expression=1.92178616525753,1.39590163055744,0,0,0,0.503637815735669,0.233612640595526,0,0.281577444303333,0.468129052643987,0,0,0,0,26.3156711834374,14.7806945194573,10.4934281719222,0.157731082679119,0.137114433605739,0.42438965179803,58.8499567845403,0,0,0.159992422793407,0,1.14846392823004,1.29228598847722,1.29282739611533,0.190023419456374,0.756090389279792,0.665191531965914,5.71527606113668,5.53558308826113,15.8481681015439,0,0,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0,1.56478268869608,22.2385659508055,16.0370913396164,13.6100929351998,7.97922603264566,33.0630898039435,0.167782606057736,0,0,0.771778308107841,0.85960031981627,1.03134418455488,7.48570905180512,6.87688273053643,12.6766280701236,4.40497891689872,5.33576877666684,0,0,0,4.19440154725767,5.76327457982332,7.56934169851887,7.02030879324791,8.2026734927039,10.5690864229407,8.61387309711293,7.34944795289724,7.66763768145891,11.9498442259303,20.9220173898839,20.8130361078856,24.4234387877427,15.0350368012421,12.0763689555181,15.6274011167028,17.0301629390842,23.0732670112989,18.9469827243245,10.9012576625257,7.97281412474976,10.6247684120421,18.5529173666301,11.1845908958043,117.105253435478,16.3480536626463,0,0.539703191637817,4.54843492213368,1.34408066129201,30.8977724289854,0.340860645156116,0,0.35333957451034,2.53518155598025,0,0,0,0.865964164044856,2.28023878927589,1.51657333504435,27.6324988920125,31.0725460376606,65.0176569103932,28.104622936114,30.7510133095263,30.9024766323118,28.1851337833404,42.8022893973965,40.2133092254962,1253.27848641328,117.559277175888,15.0383793831479,18.7649545938995,28.04687284447,29.0925151881133,9.31958806090611,20.7874365878198,11.51956887474,14.0501380364725,0.239630249011841,0,0.381210681219194,27.7112682898922,49.4100651044117,6.78533501409468,26.5951209894183,14.0643501531682,23.8956251243494,12.8170597823529,63.0385662233458,19.6563013563947,19.459652399393,53.0313476833914,10.0192741081282,7.35686734187113,14.7650946440386,14.7690721479001,25.1735046859913,29.7223831060852,30.8278673801508,87.7004426805263,8.62271971731369,11.1572587299013,5.80638709741031,9.86380795924087,8.06337022754234,13.2335823278423,20.7839957772023,103.099750211979,0,0,0,47.2246761380944,30.7229138575236,24.8485644816201,33.6177524530999,30.4984559208476,30.2363541259261,33.7174219888091,38.0948229987459,45.3049528384618,44.1020397768128,77.8153779734911,140.897590990697,104.679190996538,136.340621595742,116.088552227722,21.8701546506692,15.1269780197548,0.991256348951394,13.7514294665043,65.9060694153873,63.4006114178997,60.1811044374176,78.2532075538569,79.6113396964636,69.6225791571967,20.404749646414,82.3494773620054,35.9409348584385,42.178772072724,40.552530120777,23.3693046250098,14.9135254413539,13.9398891278057,51.7793369601913,58.6094869687909,110.453580959619,120.561586084426,139.257885786355,146.583863570766,230.497177817918,193.369293853279,167.203645151064,158.441958475592,7.70776830426587,49.2193061862477,41.4739479688858,27.658039823337,18.4602710463538,12.3000351473733,12.731292589071,16.1109836972454,5.5125977103512,9.06052663520669,11.5014565221884,14.1413560114031,11.5453939052387,8.84026072814891,11.4814344654024,5.78932225636041,360.453474015046,27.0972718831793,38.7856643932022,39.0413697282933,43.1830056850844,81.5755473741643,140.207704481862,151.033443441936,142.34453512789,135.314925375401,155.627854209707,245.139518814744,188.226630233826,226.80972385581,0,0,12.2941068254759,18.2118252561123,24.72479085812,17.3473296156461,0,36.6082844446341,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0.395287777946524,18.315315036043,48.4015690560196,117.523298420388,99.6868191243886,52.2955289822937,37.1686387351896,59.4812558579705,41.7206508611356,29.4223924419201,51.3825293612545,38.4293934929909,57.3710810833451,39.9887102425256,30.658774541086,48.037587206244,39.0048851727495,36.0974401368654,21.7881347682424,14.0447653344422,19.5331612511959,22.076714608254,24.650292476276,33.1766000739851,34.3907453058433,53.2813660950549,93.6340115174204,101.46756194377,39.2540548537832,45.1788333059655,18.8913379234209,10.2531972377865,6.2073618881631,10.833299383174,26.8162369699463,27.2575193955449,6.83483523191411,56.7563886898862,30.5570970160024,3.20226376907975,13.2593400889394,5.49067615695654,0.679913719975421,0.69975726161829,0.967399816630967,45.8241896647254,50.1392549826099,35.7842262143254,24.8412283890143,16.517975385143,22.2729815021101,20.2296519577231,24.6307298061501,22.5110110106265,19.1830160471853,19.8828580187816,0.56369293868419,50.0880429247329,29.2861528109063,28.389873498231,21.4405306973034,18.4162176784948,16.5473706490513,13.020438484395,9.54220034273969,4.83168241652012,5.47257011889944,3.16011120628178,17.0289180843738,10.1683847593179,5.45667456506739,6.26593434836185,5.16571522431289,2.04332264183947,2.51072196196781,2.42319479875554,2.362411006305,3.12561173924206,3.80085734885034,1.53938946624527,1.16876902181569,85.4773546229347,122.092274355736,104.42692909343,134.979231556719,34.1945581436977,47.8590312400514,32.0515342467714,18.0069438426415,85.2672576860118,6.21227026878773,6.44455331110048,6.87474616127276,11.3423100346834,6.85082519770642,6.0431511791176,2.70009000092722,6.75481804836331,9.06284817968409,9.83744592328458,7.9916257639816,34.3161391124887,12.6342868258059,18.2330037801221,7.75568701723535,9.55986243940074,31.781282075631,30.0811183568786,35.3011130550997,30.0709681998919,34.4731847850726,29.9915882803861,28.9352258081937,32.2046516596492,30.8428468291643,33.8168520810982,26.5375106413719,26.6214724239913,30.4943566594447,25.6126121033851,32.5725789766145,31.4132176902027,28.6123427936785,29.9413618262597,26.8211734183692,29.4458835463034,26.8904120122976,26.0439014323464,28.2472556799393,30.3016826695179,32.1500899116512,27.2857416180311,28.2369419787086,32.5367366490529,27.5856453703032,12.9901500527732,29.4753826641215,31.5860449450999,19.8939865351597,27.794518809059,34.084571836202 | |||
|short_description=p1@Podxl | |||
}} |
Latest revision as of 01:56, 27 September 2015
Short description: | p1@Podxl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Podxl_5end |
Coexpression cluster: | MCL_coexpression_mm9:531 |
Association with transcript: | 56bp_to_ENSMUST00000048101, NM_013723, uc009bgh.2_5end |
EntrezGene: | Podxl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 3.33e-10 | 79 |
urinary system structure | 7.31e-09 | 18 |
renal system | 1.63e-08 | 19 |
lung | 2.77e-08 | 14 |
respiratory tube | 2.77e-08 | 14 |
respiration organ | 2.77e-08 | 14 |
pair of lungs | 2.77e-08 | 14 |
lung primordium | 2.77e-08 | 14 |
lung bud | 2.77e-08 | 14 |
epithelial bud | 1.32e-07 | 17 |
kidney | 2.13e-07 | 14 |
kidney mesenchyme | 2.13e-07 | 14 |
upper urinary tract | 2.13e-07 | 14 |
kidney rudiment | 2.13e-07 | 14 |
kidney field | 2.13e-07 | 14 |
subdivision of trunk | 8.11e-07 | 66 |