FFCP PHASE1:Hg19::chr9:98279099..98279113,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5727 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9585 | |||
|TSSclassifier=strong | |||
|UniProt=Q13635,F5H3A7,Q59FG5 | |||
|association_with_transcript=133bp_to_ENST00000375274,ENST00000437951,ENST00000544247,NM_001083602,NM_001083603,uc004avm.3,uc004avo.2,uc010mrr.2,uc010mrv.1,uc010mrw.1_5end | |||
|cluster_id=chr9:98279099..98279113,- | |||
|coexpression_cluster_id=C4835 | |||
|description=CAGE_peak_11_at_PTCH1_5end | |||
|id=chr9:98279099..98279113,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000062;3.22e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,4.72e-10,11;CL:0000375,4.72e-10,11;CL:0000335,4.72e-10,11 | |||
|ontology_enrichment_development_v019=CL:0000335;4.22e-10;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.49e-15!57;UBERON:0005068!1.49e-15!57;UBERON:0006241!1.49e-15!57;UBERON:0007135!1.49e-15!57;UBERON:0000073!8.20e-14!94;UBERON:0001016!8.20e-14!94;UBERON:0002346!4.29e-13!90;UBERON:0003075!6.09e-13!86;UBERON:0007284!6.09e-13!86;UBERON:0005743!9.60e-13!86;UBERON:0001017!1.34e-12!82;UBERON:0000955!1.45e-12!69;UBERON:0006238!1.45e-12!69;UBERON:0002616!4.50e-12!59;UBERON:0002020!5.98e-12!34;UBERON:0003528!5.98e-12!34;UBERON:0001893!6.66e-12!34;UBERON:0001869!2.33e-11!32;UBERON:0001950!2.53e-11!20;UBERON:0002791!5.85e-11!33;UBERON:0002619!4.39e-10!22;UBERON:0007023!4.56e-10!115;UBERON:0000059!1.75e-09!11;UBERON:0002780!3.36e-09!41;UBERON:0001890!3.36e-09!41;UBERON:0006240!3.36e-09!41;UBERON:0001871!5.51e-09!7;UBERON:0003080!6.89e-09!42;UBERON:0003076!6.92e-09!15;UBERON:0003057!6.92e-09!15;UBERON:0000956!1.36e-08!25;UBERON:0000203!1.36e-08!25;UBERON:0005409!1.93e-08!35;UBERON:0004907!1.25e-07!5;UBERON:0000160!2.55e-07!27;UBERON:0000924!5.17e-07!173;UBERON:0006601!5.17e-07!173;UBERON:0004733!7.68e-07!12;UBERON:0002028!7.68e-07!12;UBERON:0007277!7.68e-07!12;UBERON:0004121!8.65e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.77e-18;22!UBERON:0000059;1.81e-17;11!UBERON:0000160;2.58e-16;17!UBERON:0001052;7.92e-13;4!UBERON:0000922;1.35e-11;49!UBERON:0004921;1.65e-11;33!UBERON:0004907;1.90e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,1.93e-17,11;UBERON:0000160,2.84e-16,17;UBERON:0005409,5.41e-16,25;UBERON:0001052,1.10e-12,4;UBERON:0004907,2.47e-10,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46511143709349,1.48517099857058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0.296964680832639,0,0,0.422008249231538,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0.173624994933292,0,0.361789315876224,1.52581736317083,0.552896299656123,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0.865554558968364,1.99052386215701,0.884575645033392,3.05515072466813,0.889563386041866,0.494255755786011,0.522109747527277,0.134802265961354,0.802577647298789,0,0,0,0,0,2.41981432097328,0.61214552326098,0,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617792886840502,0,0,0,0.189932387867636,0,0,0.426905989478705,0,0,0.114536596165916,0.343189995723929,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0.279282401272254,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.78602152549833,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.500763722825999,0,0.221858103073705,0.124192805882767,0.138348634936231,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,0.431299245586727,0,0.327628914576042,0,0,0.371807292777007,0,0,0.0788617450012534,0,0,0,0,0,0.319267718114302,0,0.756215088665154,0.138314504928436,0,0,0,0,0,0,0,0,1.19349733269765,0,0,0,0,0,0,0.0675375846183947,0,0,0,1.64092442705466,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,1.12108865325516,4.56579360254748,0,0,0.357382720883282,0.316027223465453,6.27703696987876,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,1.1598144313382,0,0,0,0,1.6941912305844,0,0.150962843566674,0.308696632431779,1.31135736302374,0,0.245148321753905,0,0.196308467114945,0,1.2679671827502,0,0,0.128915775947154,0,0,0,0,3.65168194123259,0,0,0.315543124386369,0.135982980381829,0.436350690340377,0.5290268405154,0,0,0,0,0.109265571963696,0.633492505057185,0,0,0.18378979906969,0,0.909344378618873,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.733448665097199,0.813792356631477,0,0,0 | |||
|short_description=p11@PTCH1 | |||
}} |
Latest revision as of 10:58, 18 September 2015
Short description: | p11@PTCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PTCH1_5end |
Coexpression cluster: | C4835_rhabdomyosarcoma_rectum_colon_stomach_duodenum_small_testis |
Association with transcript: | 133bp_to_ENST00000375274, ENST00000437951, ENST00000544247, NM_001083602, NM_001083603, uc004avm.3, uc004avo.2, uc010mrr.2, uc010mrv.1, uc010mrw.1_5end |
EntrezGene: | PTCH1 |
HGNC: | 9585 |
UniProt: | Q13635F5H3A7Q59FG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 4.72e-10 | 11 |
osteoprogenitor cell | 4.72e-10 | 11 |
mesenchyme condensation cell | 4.72e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
large intestine | 1.93e-17 | 11 |
intestine | 2.84e-16 | 17 |
gastrointestinal system | 5.41e-16 | 25 |
rectum | 1.10e-12 | 4 |
lower digestive tract | 2.47e-10 | 5 |