FFCP PHASE1:Mm9::chr6:72297674..72297747,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=8|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:72297674..72297747,-|id=chr6:72297674..72297747,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005911!9.45e-14!69;UBERON:0000490!9.76e-14!66;UBERON:0003929!1.02e-13!55;UBERON:0000949!8.25e-13!72;UBERON:0002368!1.60e-12!60;UBERON:0002530!3.58e-12!65;UBERON:0003104!7.38e-10!131;UBERON:0009142!7.38e-10!131;UBERON:0005057!1.42e-09!51;UBERON:0002107!3.00e-09!22;UBERON:0007499!3.00e-09!22;UBERON:0006925!3.00e-09!22;UBERON:0009497!3.00e-09!22;UBERON:0000015!3.00e-09!22;UBERON:0002423!3.00e-09!22;UBERON:0006235!3.00e-09!22;UBERON:0008835!3.00e-09!22;UBERON:0003894!3.00e-09!22;UBERON:0004161!3.00e-09!22;UBERON:0008836!3.00e-09!22;UBERON:0002100!2.45e-08!98;UBERON:0002405!3.07e-08!70;UBERON:0009854!4.72e-08!23;UBERON:0009856!4.72e-08!23;UBERON:0002365!5.60e-08!25;UBERON:0002330!5.60e-08!25;UBERON:0001041!6.17e-08!92;UBERON:0000926!1.03e-07!193;UBERON:0004120!1.03e-07!193;UBERON:0006603!1.03e-07!193;UBERON:0000077!1.22e-07!97;UBERON:0005177!1.64e-07!85;UBERON:0005172!1.71e-07!49;UBERON:0005173!1.71e-07!49;UBERON:0002417!1.71e-07!49;UBERON:0000916!1.71e-07!49;UBERON:0009569!2.77e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0000490,8.07e-14,66;UBERON:0005911,8.94e-14,69;UBERON:0003929,9.65e-14,55;UBERON:0000949,6.44e-13,72;UBERON:0002368,1.53e-12,60;UBERON:0002530,3.43e-12,65;UBERON:0002107,3.93e-09,22;UBERON:0007499,3.93e-09,22;UBERON:0006925,3.93e-09,22;UBERON:0009497,3.93e-09,22;UBERON:0000015,3.93e-09,22;UBERON:0002423,3.93e-09,22;UBERON:0006235,3.93e-09,22;UBERON:0008835,3.93e-09,22;UBERON:0003894,3.93e-09,22;UBERON:0004161,3.93e-09,22;UBERON:0008836,3.93e-09,22;UBERON:0003104,4.44e-08,61;UBERON:0009142,4.44e-08,61;UBERON:0009854,4.72e-08,23;UBERON:0009856,4.72e-08,23;UBERON:0002365,7.08e-08,25;UBERON:0002330,7.08e-08,25;UBERON:0002100,2.03e-07,90;UBERON:0005172,2.30e-07,49;UBERON:0005173,2.30e-07,49;UBERON:0002417,2.30e-07,49;UBERON:0000916,2.30e-07,49;UBERON:0005177,2.46e-07,79;UBERON:0009569,3.56e-07,66;UBERON:0001041,3.57e-07,80|phase1_expression=8.16759120234449,3.14077866875425,3.63999391511629,2.72217790176147,2.50447864973174,4.8684988854448,4.43864017131499,3.87369970324729,15.3459707145317,20.3636137900134,2.05461561870606,2.23362045186942,1.36960583944965,3.75907730401689,1.33243904726265,2.42970320867791,2.09868563438444,5.99378114180652,4.66189074259512,5.94145512517242,6.03807360072595,13.4042784121195,10.4479915655574,3.35984087866154,2.98232065387321,4.59385571292016,5.1691439539089,6.24866574789078,0.950117097281869,1.26015064879965,2.88249663851896,1.27006134691926,1.84519436275371,0,4.04392267651784,1.99481574430191,5.51257261908397,7.53356935326434,7.0320181007142,6.28228492768558,4.1176204162171,3.41522742479223,4.85510353031154,3.02152363141385,2.83855407414641,2.38610777810186,8.60630478782843,1.96222640742402,5.71184075109627,4.6663175777828,1.95980990275508,1.43752564364972,13.5903910906766,3.62681071005672,7.05796978199174,0.771778308107841,0,1.03134418455488,2.63011399117477,2.11596391708813,1.90149421051854,2.37191172448392,1.77858959222228,1.3498495759221,0,0.7104801149461,3.29560121570245,5.37905627450176,0.725827286159344,0.945041568321835,0.630974884054146,4.57041575046086,4.8591079009355,0.61245399607477,0.479227355091182,1.83843757322004,0,1.27687338085188,0.307213066512487,2.63772575460388,2.19570344645783,2.6045668527838,0.837548997004143,0.56276261003168,1.68078072554491,4.41942878210502,2.84743361598206,1.4911955666024,0.227178579999552,0.0755715601067855,4.92769630792852,23.2314446784974,8.83962733820076,9.17495425784289,17.5439632710871,28.2256938871321,11.6568868709354,1.70430322578058,0.779358013808606,0,11.1266301623578,2.56652954828636,0,7.11066703153331,1.08245520505607,3.04031838570118,1.51657333504435,8.5637909789295,2.33044095282455,2.52351636410202,1.90833859442749,1.82679286987285,1.38369298353635,1.05505848386836,1.88141931417128,2.38766523526383,8.40462890296871,1.73519228303894,0.884610551949874,1.7794353494215,1.54589062922275,2.90925151881133,0,1.46390398505774,0.628340120440365,1.78819938646014,4.79260498023681,5.39912457894067,4.57452817463033,1.19832511523858,0,2.76439574648302,1.04294592115366,2.04572365864264,1.24672826735736,1.62241263067758,2.74966282395854,2.48813941220186,7.58168275301024,1.05220927943237,0.910843100738926,2.75882525320168,2.52086981727489,1.50704817835715,2.04109497453984,2.3060469651273,1.68663104207512,1.29351685369508,2.37124792226126,2.64748512234947,2.46331573829528,2.6303487891309,3.89266148915837,1.74126083261083,1.23469281844766,1.79130840136644,2.80885274925294,4.63226232806487,2.55747149456033,1.03562886267751,1.40715635988658,1.62055855314913,0.710234206755631,1.18058539048442,1.23413690309903,1.39520366850245,0.536546802799238,0.700592054203017,0.658239399653922,2.62667942526552,2.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:72297674..72297747,- | |||
|description=CAGE_peak_at_chr6:72297674..72297747,- | |||
|id=chr6:72297674..72297747,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005911!9.45e-14!69;UBERON:0000490!9.76e-14!66;UBERON:0003929!1.02e-13!55;UBERON:0000949!8.25e-13!72;UBERON:0002368!1.60e-12!60;UBERON:0002530!3.58e-12!65;UBERON:0003104!7.38e-10!131;UBERON:0009142!7.38e-10!131;UBERON:0005057!1.42e-09!51;UBERON:0002107!3.00e-09!22;UBERON:0007499!3.00e-09!22;UBERON:0006925!3.00e-09!22;UBERON:0009497!3.00e-09!22;UBERON:0000015!3.00e-09!22;UBERON:0002423!3.00e-09!22;UBERON:0006235!3.00e-09!22;UBERON:0008835!3.00e-09!22;UBERON:0003894!3.00e-09!22;UBERON:0004161!3.00e-09!22;UBERON:0008836!3.00e-09!22;UBERON:0002100!2.45e-08!98;UBERON:0002405!3.07e-08!70;UBERON:0009854!4.72e-08!23;UBERON:0009856!4.72e-08!23;UBERON:0002365!5.60e-08!25;UBERON:0002330!5.60e-08!25;UBERON:0001041!6.17e-08!92;UBERON:0000926!1.03e-07!193;UBERON:0004120!1.03e-07!193;UBERON:0006603!1.03e-07!193;UBERON:0000077!1.22e-07!97;UBERON:0005177!1.64e-07!85;UBERON:0005172!1.71e-07!49;UBERON:0005173!1.71e-07!49;UBERON:0002417!1.71e-07!49;UBERON:0000916!1.71e-07!49;UBERON:0009569!2.77e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,8.07e-14,66;UBERON:0005911,8.94e-14,69;UBERON:0003929,9.65e-14,55;UBERON:0000949,6.44e-13,72;UBERON:0002368,1.53e-12,60;UBERON:0002530,3.43e-12,65;UBERON:0002107,3.93e-09,22;UBERON:0007499,3.93e-09,22;UBERON:0006925,3.93e-09,22;UBERON:0009497,3.93e-09,22;UBERON:0000015,3.93e-09,22;UBERON:0002423,3.93e-09,22;UBERON:0006235,3.93e-09,22;UBERON:0008835,3.93e-09,22;UBERON:0003894,3.93e-09,22;UBERON:0004161,3.93e-09,22;UBERON:0008836,3.93e-09,22;UBERON:0003104,4.44e-08,61;UBERON:0009142,4.44e-08,61;UBERON:0009854,4.72e-08,23;UBERON:0009856,4.72e-08,23;UBERON:0002365,7.08e-08,25;UBERON:0002330,7.08e-08,25;UBERON:0002100,2.03e-07,90;UBERON:0005172,2.30e-07,49;UBERON:0005173,2.30e-07,49;UBERON:0002417,2.30e-07,49;UBERON:0000916,2.30e-07,49;UBERON:0005177,2.46e-07,79;UBERON:0009569,3.56e-07,66;UBERON:0001041,3.57e-07,80 | |||
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| |||
|short_description=p@chr6:72297674..72297747,- | |||
}} |
Latest revision as of 02:39, 6 August 2015
Short description: | p@chr6:72297674..72297747, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:72297674..72297747, - |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 8.07e-14 | 66 |
endo-epithelium | 8.94e-14 | 69 |
gut epithelium | 9.65e-14 | 55 |
endocrine system | 6.44e-13 | 72 |
endocrine gland | 1.53e-12 | 60 |
gland | 3.43e-12 | 65 |
liver | 3.93e-09 | 22 |
epithelial sac | 3.93e-09 | 22 |
digestive gland | 3.93e-09 | 22 |
epithelium of foregut-midgut junction | 3.93e-09 | 22 |
anatomical boundary | 3.93e-09 | 22 |
hepatobiliary system | 3.93e-09 | 22 |
foregut-midgut junction | 3.93e-09 | 22 |
hepatic diverticulum | 3.93e-09 | 22 |
liver primordium | 3.93e-09 | 22 |
septum transversum | 3.93e-09 | 22 |
liver bud | 3.93e-09 | 22 |
mesenchyme | 4.44e-08 | 61 |
entire embryonic mesenchyme | 4.44e-08 | 61 |
digestive tract diverticulum | 4.72e-08 | 23 |
sac | 4.72e-08 | 23 |
exocrine gland | 7.08e-08 | 25 |
exocrine system | 7.08e-08 | 25 |
trunk | 2.03e-07 | 90 |
abdomen element | 2.30e-07 | 49 |
abdominal segment element | 2.30e-07 | 49 |
abdominal segment of trunk | 2.30e-07 | 49 |
abdomen | 2.30e-07 | 49 |
trunk region element | 2.46e-07 | 79 |
subdivision of trunk | 3.56e-07 | 66 |
foregut | 3.57e-07 | 80 |