FFCP PHASE1:Mm9::chr11:106128919..106128933,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:106128919..106128933,-
|short_description=p8@Smarcd2
|description=CAGE_peak_8_at_Smarcd2_5end
|association_with_transcript=12bp_to_NM_031878,uc007lyo.2_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=83796 | |EntrezGene=83796 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3TXH6,Q99JR8 | |UniProt=Q3TXH6,Q99JR8 | ||
|association_with_transcript=12bp_to_NM_031878,uc007lyo.2_5end | |||
|cluster_id=chr11:106128919..106128933,- | |||
|description=CAGE_peak_8_at_Smarcd2_5end | |||
|id=chr11:106128919..106128933,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,3.29e-15,3;CL:0002563,1.34e-08,9;CL:0002251,1.34e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.79e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.07e-14,5;UBERON:0001003,1.07e-14,5;UBERON:0002097,1.07e-14,5;UBERON:0002199,1.07e-14,5;UBERON:0007029,1.07e-14,5;UBERON:0007376,1.07e-14,5;UBERON:0002416,1.07e-14,5;UBERON:0007383,1.07e-14,5;UBERON:0003102,5.52e-12,22;UBERON:0000485,1.85e-10,11;UBERON:0002102,2.66e-10,7;UBERON:0004710,2.66e-10,7;UBERON:0005419,2.66e-10,7;UBERON:0005417,2.66e-10,7;UBERON:0005729,2.66e-10,7;UBERON:0001911,5.72e-10,2;UBERON:0000076,5.72e-10,2;UBERON:0005333,5.72e-10,2;UBERON:0008425,5.72e-10,2;UBERON:0005311,5.72e-10,2;UBERON:0010708,4.94e-09,8;UBERON:0001242,1.02e-08,13;UBERON:0001262,1.02e-08,13;UBERON:0004786,1.02e-08,13;UBERON:0003350,1.34e-08,9;UBERON:0004808,1.34e-08,9;UBERON:0001277,1.34e-08,9;UBERON:0000344,1.58e-07,15 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0.30246421130683,0,1.17515490338323,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.639969691173627,0.91763712426868,0,0,0.215471232685889,0.380046838912748,0.504060259519861,1.10865255327652,0,0,0,4.62162591602039,4.15586613396231,3.67504841272264,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0.860423876981386,0,1.07940638327563,0.649776417447669,0,0.140444420131752,0,0,0,1.26759077799012,0,0,0,0,0.760079596425296,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0.631325567659422,0,0,0.180062129805349,0.150704817835715,0.204109497453984,0,0.374806898238915,0,1.94011193639558,1.13463648100692,0.703804496655795,0,1.11218899690239,1.74126083261083,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.469380496577004,0.670025029767263,0.238043640886014,0,0.157635144106191,0,0,0,0.172684981865896,0.289298117163023,0,0,1.47529281905711,1.37968373152366,0.160550589987792,0,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.659880491890142,0,2.18502572539483,0.906970670894253,0.565815239267694,0.295301892880773,0.614870295887855,0.258428293168221,1.45413491791002,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0.304464949114599,0,0,0,1.15420377059036,1.29171541356724,1.93001359770099,3.10368094408155,0.656563598980245,0,0.18542530201051,0,0,0,0,0,0.228778173206523,0.339956859987711,0.139951452323658,0.414599921413271,0.954670618015114,0.158167996790568,0.203319467126849,0.108005340821801,0.627264888043406,0,0.944050424693745,0.578574190077352,0.26175594198403,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0.308132871494482,0.129920822977795,0.358053391334963,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0,0.579568782096571,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.486213434136588,0,0.183843508450014,0,0,0,0.505394423527595,0.25347929989024,0,0.749132059759059,0.320125762024346,0.287177344778066,0,0.347652977834566,1.15745532278223,0.824171801606613,0,0,0.354951612318675,0.715308569841963,0.581385666529314,0.188218760830661,0.423073039458382,0.182927972872773,0,0.271608227691724,0,0.355905054372522,0.394017929502254,0,0,0.771626443924566,0.499621155875892,0.233931608445408,0.429742108096597,0.57386499620653,0,0 | |phase1_expression=0.160148847104794,0.348975407639361,0,0.30246421130683,0,1.17515490338323,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.639969691173627,0.91763712426868,0,0,0.215471232685889,0.380046838912748,0.504060259519861,1.10865255327652,0,0,0,4.62162591602039,4.15586613396231,3.67504841272264,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0.860423876981386,0,1.07940638327563,0.649776417447669,0,0.140444420131752,0,0,0,1.26759077799012,0,0,0,0,0.760079596425296,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0.631325567659422,0,0,0.180062129805349,0.150704817835715,0.204109497453984,0,0.374806898238915,0,1.94011193639558,1.13463648100692,0.703804496655795,0,1.11218899690239,1.74126083261083,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.469380496577004,0.670025029767263,0.238043640886014,0,0.157635144106191,0,0,0,0.172684981865896,0.289298117163023,0,0,1.47529281905711,1.37968373152366,0.160550589987792,0,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.659880491890142,0,2.18502572539483,0.906970670894253,0.565815239267694,0.295301892880773,0.614870295887855,0.258428293168221,1.45413491791002,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0.304464949114599,0,0,0,1.15420377059036,1.29171541356724,1.93001359770099,3.10368094408155,0.656563598980245,0,0.18542530201051,0,0,0,0,0,0.228778173206523,0.339956859987711,0.139951452323658,0.414599921413271,0.954670618015114,0.158167996790568,0.203319467126849,0.108005340821801,0.627264888043406,0,0.944050424693745,0.578574190077352,0.26175594198403,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0.308132871494482,0.129920822977795,0.358053391334963,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0,0.579568782096571,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.486213434136588,0,0.183843508450014,0,0,0,0.505394423527595,0.25347929989024,0,0.749132059759059,0.320125762024346,0.287177344778066,0,0.347652977834566,1.15745532278223,0.824171801606613,0,0,0.354951612318675,0.715308569841963,0.581385666529314,0.188218760830661,0.423073039458382,0.182927972872773,0,0.271608227691724,0,0.355905054372522,0.394017929502254,0,0,0.771626443924566,0.499621155875892,0.233931608445408,0.429742108096597,0.57386499620653,0,0 | ||
|short_description=p8@Smarcd2 | |||
}} | }} |
Latest revision as of 20:11, 26 September 2015
Short description: | p8@Smarcd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Smarcd2_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_NM_031878, uc007lyo.2_5end |
EntrezGene: | Smarcd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 3.29e-15 | 3 |
intestinal epithelial cell | 1.34e-08 | 9 |
epithelial cell of alimentary canal | 1.34e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.07e-14 | 5 |
skin epidermis | 1.07e-14 | 5 |
skin of body | 1.07e-14 | 5 |
integument | 1.07e-14 | 5 |
surface | 1.07e-14 | 5 |
outer epithelium | 1.07e-14 | 5 |
integumental system | 1.07e-14 | 5 |
enveloping layer of ectoderm | 1.07e-14 | 5 |
surface structure | 5.52e-12 | 22 |
simple columnar epithelium | 1.85e-10 | 11 |
forelimb | 2.66e-10 | 7 |
pectoral appendage | 2.66e-10 | 7 |
pectoral appendage bud | 2.66e-10 | 7 |
forelimb bud | 2.66e-10 | 7 |
forelimb/pectoral fin field | 2.66e-10 | 7 |
mammary gland | 5.72e-10 | 2 |
external ectoderm | 5.72e-10 | 2 |
mammary bud | 5.72e-10 | 2 |
mammary ridge | 5.72e-10 | 2 |
mammary placode | 5.72e-10 | 2 |
pectoral complex | 4.94e-09 | 8 |
intestinal mucosa | 1.02e-08 | 13 |
wall of intestine | 1.02e-08 | 13 |
gastrointestinal system mucosa | 1.02e-08 | 13 |
epithelium of mucosa | 1.34e-08 | 9 |
gastrointestinal system epithelium | 1.34e-08 | 9 |
intestinal epithelium | 1.34e-08 | 9 |
mucosa | 1.58e-07 | 15 |