FFCP PHASE1:Mm9::chr7:19930433..19930476,+: Difference between revisions
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{{FFCP|EntrezGene=13870|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000160192,ENSMUST00000160909_5end|description=CAGE_peak_1_at_Ercc1_5end|id=chr7:19930433..19930476,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!6.95e-07!18;UBERON:0000948!6.95e-07!18;UBERON:0005498!6.95e-07!18;UBERON:0004140!6.95e-07!18;UBERON:0009881!6.95e-07!18;UBERON:0004141!6.95e-07!18;UBERON:0003084!6.95e-07!18;UBERON:0007005!6.95e-07!18;UBERON:0004139!6.95e-07!18;UBERON:0004291!6.95e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.04e-10,92;UBERON:0007100,6.95e-07,18;UBERON:0000948,6.95e-07,18;UBERON:0005498,6.95e-07,18;UBERON:0004140,6.95e-07,18;UBERON:0009881,6.95e-07,18;UBERON:0004141,6.95e-07,18;UBERON:0003084,6.95e-07,18;UBERON:0007005,6.95e-07,18;UBERON:0004139,6.95e-07,18;UBERON:0004291,6.95e-07,18|phase1_expression=35.8733417514738,3.83872948403297,2.27499619694768,3.0246421130683,1.00179145989269,5.87577451691614,8.87728034262997,24.1460614835748,17.1762241025033,7.49006484230379,46.5712873573374,8.21653237651965,33.2129416066539,20.5437945684644,15.3230490435205,16.8054471933556,7.69518065940961,31.7039476185029,24.2692547482158,23.7658205006897,18.4543939627821,26.7092658730381,37.0903700577288,7.51964387129011,6.8822784320151,2.8711598205751,4.73838195774982,4.52489588640367,7.22088993934221,4.53654233567875,6.20845429834853,45.0871778156338,35.0586928923205,47.5445043046316,18.4865036640816,22.1092078326795,20.2127662699745,21.7636447983192,21.0960543021426,14.1351410872926,18.2351761289614,19.8083190637949,19.4204141212461,13.4709595233868,13.3817549209759,8.25960384727567,35.2076104956618,20.2763395433815,27.02140047634,24.4981672833597,14.9785471139138,33.0630898039435,27.8519126055842,20.3101399763176,24.5348473373999,22.3815709351274,27.7937436740594,36.6127185516984,18.613114399083,33.3264316941381,27.8885817542719,41.000188380365,19.5644855144451,29.2467408116455,53.3987835786166,42.628806896766,29.6604109413221,41.8797952800494,17.8346133170582,33.3464667679276,20.8221711737868,37.4202789568983,34.0137553065485,30.7451906029535,26.0699681169603,28.4957823849107,23.1243350098716,20.1745994174597,13.2101618600369,22.420668914133,26.8973672191084,26.5665818983948,20.6595419261022,21.3849791812038,16.6550090076723,20.3293723976831,21.4981238006645,25.7231235238915,25.519727153283,27.5836194389767,30.1459068249745,17.2084775396277,3.39985666853875,6.47643829965381,11.695975514058,7.16843019355737,11.9377757111989,15.6795896771813,17.1458763037893,17.666978725517,34.6474812650634,12.8326477414318,12.7402619853323,14.2213340630666,40.2673336280858,34.2035818391383,35.8922355960496,7.76450382089608,22.5275958773039,25.6804900582147,30.706902837606,32.273340701087,25.8289356926786,28.1851337833404,22.5770317700553,21.9916534826932,19.7755974187499,25.0156887471447,22.9998743506967,27.0150639412173,17.0047969214503,26.6681389224372,29.8226817948995,31.034764483224,26.5997317653088,17.3710797541842,22.8846887806308,33.5945529356308,24.2704133709554,26.8125244534633,30.1950397860293,25.1308704225729,25.5521750682646,25.3158302757027,31.168206683934,23.6872244078926,32.1812389766999,21.397998944936,26.7886123939695,20.2024181651015,33.9614356132657,43.2215956334929,36.5526123504859,35.1142225557216,27.6228186554391,35.7437279594731,33.9200242906218,27.6812606690747,37.0776947844489,35.1737309112144,33.6066647153142,39.2360361045359,31.6973864117182,27.163668988729,30.0441919155597,33.8358253591438,23.1730351813367,25.7347907114715,22.4489164522518,34.7971297859643,40.5730083767296,33.4915434317488,38.8261366359745,36.2046186415223,34.4015661738853,34.4150238230604,32.7293549707535,28.8410395646909,29.6207729844265,29.385976070158,30.4008035796959,34.3569970449531,36.4453191383144,40.3961320468719,30.9126224389267,30.768479101406,12.8863325363681,12.4291766331866,29.2204903233271,28.5651106388339,26.8044319549954,21.5801371346977,19.3468898145037,20.9248188723815,13.7613427847908,17.9521860649172,17.0907941984183,13.9269530428806,19.8863368861503,14.3811105384675,20.7492527879706,15.732160587095,39.0715875963348,28.9048736902614,28.1769339182701,24.8454619971283,29.2868255623115,22.233054905231,20.7415841767564,15.3514553898786,17.4268587903926,19.6201490635663,13.6368208460088,17.685581205906,22.2111664477919,18.8884174403277,14.6059287399722,16.8824011826692,12.9859184408524,15.8232875597946,7.94462611197673,12.0807021802756,1.43768206527355,11.5363693777236,14.9778083094989,11.36604950762,8.61107584905178,10.1313139486307,31.777548708656,34.2979455304577,36.8300846758979,35.9859581843399,39.1932714641799,37.6889079244085,30.2315423925237,19.9036320814955,28.6895962273268,26.1328333785554,25.0343986792255,31.1340297959902,29.1837619353364,29.9423551263729,9.04747703635634,12.5098307278303,11.8023425524569,13.7968373152366,28.578005017827,20.2776217804511,11.4754461763673,40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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13870 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000160192,ENSMUST00000160909_5end | |||
|cluster_id=chr7:19930433..19930476,+ | |||
|description=CAGE_peak_1_at_Ercc1_5end | |||
|id=chr7:19930433..19930476,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!6.95e-07!18;UBERON:0000948!6.95e-07!18;UBERON:0005498!6.95e-07!18;UBERON:0004140!6.95e-07!18;UBERON:0009881!6.95e-07!18;UBERON:0004141!6.95e-07!18;UBERON:0003084!6.95e-07!18;UBERON:0007005!6.95e-07!18;UBERON:0004139!6.95e-07!18;UBERON:0004291!6.95e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.04e-10,92;UBERON:0007100,6.95e-07,18;UBERON:0000948,6.95e-07,18;UBERON:0005498,6.95e-07,18;UBERON:0004140,6.95e-07,18;UBERON:0009881,6.95e-07,18;UBERON:0004141,6.95e-07,18;UBERON:0003084,6.95e-07,18;UBERON:0007005,6.95e-07,18;UBERON:0004139,6.95e-07,18;UBERON:0004291,6.95e-07,18 | |||
|phase1_expression=35.8733417514738,3.83872948403297,2.27499619694768,3.0246421130683,1.00179145989269,5.87577451691614,8.87728034262997,24.1460614835748,17.1762241025033,7.49006484230379,46.5712873573374,8.21653237651965,33.2129416066539,20.5437945684644,15.3230490435205,16.8054471933556,7.69518065940961,31.7039476185029,24.2692547482158,23.7658205006897,18.4543939627821,26.7092658730381,37.0903700577288,7.51964387129011,6.8822784320151,2.8711598205751,4.73838195774982,4.52489588640367,7.22088993934221,4.53654233567875,6.20845429834853,45.0871778156338,35.0586928923205,47.5445043046316,18.4865036640816,22.1092078326795,20.2127662699745,21.7636447983192,21.0960543021426,14.1351410872926,18.2351761289614,19.8083190637949,19.4204141212461,13.4709595233868,13.3817549209759,8.25960384727567,35.2076104956618,20.2763395433815,27.02140047634,24.4981672833597,14.9785471139138,33.0630898039435,27.8519126055842,20.3101399763176,24.5348473373999,22.3815709351274,27.7937436740594,36.6127185516984,18.613114399083,33.3264316941381,27.8885817542719,41.000188380365,19.5644855144451,29.2467408116455,53.3987835786166,42.628806896766,29.6604109413221,41.8797952800494,17.8346133170582,33.3464667679276,20.8221711737868,37.4202789568983,34.0137553065485,30.7451906029535,26.0699681169603,28.4957823849107,23.1243350098716,20.1745994174597,13.2101618600369,22.420668914133,26.8973672191084,26.5665818983948,20.6595419261022,21.3849791812038,16.6550090076723,20.3293723976831,21.4981238006645,25.7231235238915,25.519727153283,27.5836194389767,30.1459068249745,17.2084775396277,3.39985666853875,6.47643829965381,11.695975514058,7.16843019355737,11.9377757111989,15.6795896771813,17.1458763037893,17.666978725517,34.6474812650634,12.8326477414318,12.7402619853323,14.2213340630666,40.2673336280858,34.2035818391383,35.8922355960496,7.76450382089608,22.5275958773039,25.6804900582147,30.706902837606,32.273340701087,25.8289356926786,28.1851337833404,22.5770317700553,21.9916534826932,19.7755974187499,25.0156887471447,22.9998743506967,27.0150639412173,17.0047969214503,26.6681389224372,29.8226817948995,31.034764483224,26.5997317653088,17.3710797541842,22.8846887806308,33.5945529356308,24.2704133709554,26.8125244534633,30.1950397860293,25.1308704225729,25.5521750682646,25.3158302757027,31.168206683934,23.6872244078926,32.1812389766999,21.397998944936,26.7886123939695,20.2024181651015,33.9614356132657,43.2215956334929,36.5526123504859,35.1142225557216,27.6228186554391,35.7437279594731,33.9200242906218,27.6812606690747,37.0776947844489,35.1737309112144,33.6066647153142,39.2360361045359,31.6973864117182,27.163668988729,30.0441919155597,33.8358253591438,23.1730351813367,25.7347907114715,22.4489164522518,34.7971297859643,40.5730083767296,33.4915434317488,38.8261366359745,36.2046186415223,34.4015661738853,34.4150238230604,32.7293549707535,28.8410395646909,29.6207729844265,29.385976070158,30.4008035796959,34.3569970449531,36.4453191383144,40.3961320468719,30.9126224389267,30.768479101406,12.8863325363681,12.4291766331866,29.2204903233271,28.5651106388339,26.8044319549954,21.5801371346977,19.3468898145037,20.9248188723815,13.7613427847908,17.9521860649172,17.0907941984183,13.9269530428806,19.8863368861503,14.3811105384675,20.7492527879706,15.732160587095,39.0715875963348,28.9048736902614,28.1769339182701,24.8454619971283,29.2868255623115,22.233054905231,20.7415841767564,15.3514553898786,17.4268587903926,19.6201490635663,13.6368208460088,17.685581205906,22.2111664477919,18.8884174403277,14.6059287399722,16.8824011826692,12.9859184408524,15.8232875597946,7.94462611197673,12.0807021802756,1.43768206527355,11.5363693777236,14.9778083094989,11.36604950762,8.61107584905178,10.1313139486307,31.777548708656,34.2979455304577,36.8300846758979,35.9859581843399,39.1932714641799,37.6889079244085,30.2315423925237,19.9036320814955,28.6895962273268,26.1328333785554,25.0343986792255,31.1340297959902,29.1837619353364,29.9423551263729,9.04747703635634,12.5098307278303,11.8023425524569,13.7968373152366,28.578005017827,20.2776217804511,11.4754461763673,40.9002902071084,29.3422644057119,32.406415776621,20.4652227846159,21.2682230177771,20.0518806674155,18.1168979704853,26.717506310543,20.4579100537918,18.1832377855401,31.8108103257589,31.0848786606108,36.5034487517873,20.6866438379042,23.4257574621,26.5490276679926,33.2609471532325,28.1160907977218,21.6895841719283,25.3959627877465,21.8278955040189,17.0562673491026,15.9954840970102,21.746340081468,14.5376908650475,20.0295356292498,21.6584640821192,26.2138496430417,29.5300194211349,40.3599093402194,25.2917701337279,28.3744373827638,26.7553226403106,28.1378825229627,33.1866794534913,17.3657063967146,30.2919861335263,25.8018225724305,27.8657767471101,22.9279485908186,19.4207618268662,29.1268519367653,26.5908257586999,14.2825609948627,27.8137953015765,22.3840853845187,28.6877746468879,25.5568447770202,23.9227940395958,13.9428112275446,13.7266903923914,20.2274331692688,25.4711643229058,20.3153961492503,17.184071124272,29.1029114094645,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| |||
|short_description=p1@Ercc1 | |||
}} |
Latest revision as of 08:25, 26 September 2015
Short description: | p1@Ercc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ercc1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000160192, ENSMUST00000160909_5end |
EntrezGene: | Ercc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.04e-10 | 92 |
primary circulatory organ | 6.95e-07 | 18 |
heart | 6.95e-07 | 18 |
primitive heart tube | 6.95e-07 | 18 |
primary heart field | 6.95e-07 | 18 |
anterior lateral plate mesoderm | 6.95e-07 | 18 |
heart tube | 6.95e-07 | 18 |
heart primordium | 6.95e-07 | 18 |
cardiac mesoderm | 6.95e-07 | 18 |
cardiogenic plate | 6.95e-07 | 18 |
heart rudiment | 6.95e-07 | 18 |