FFCP PHASE1:Mm9::chr7:88711886..88711897,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=244091|HGNC=|MCL_coexpression_id=19|UniProt=Q8BZ52,Q8C1E6|association_with_transcript=-19bp_to_NM_172904,uc009icd.1_5end|description=CAGE_peak_2_at_Fsd2_5end|id=chr7:88711886..88711897,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!6.83e-16!18;UBERON:0000948!6.83e-16!18;UBERON:0005498!6.83e-16!18;UBERON:0004140!6.83e-16!18;UBERON:0009881!6.83e-16!18;UBERON:0004141!6.83e-16!18;UBERON:0003084!6.83e-16!18;UBERON:0007005!6.83e-16!18;UBERON:0004139!6.83e-16!18;UBERON:0004291!6.83e-16!18;UBERON:0004535!2.74e-11!23;UBERON:0001009!2.74e-11!23;UBERON:0004872!2.58e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.79e-52,18;UBERON:0000948,1.79e-52,18;UBERON:0005498,1.79e-52,18;UBERON:0004140,1.79e-52,18;UBERON:0009881,1.79e-52,18;UBERON:0004141,1.79e-52,18;UBERON:0003084,1.79e-52,18;UBERON:0007005,1.79e-52,18;UBERON:0004139,1.79e-52,18;UBERON:0004291,1.79e-52,18;UBERON:0004535,1.49e-40,23;UBERON:0001009,1.49e-40,23;UBERON:0004872,1.57e-27,33;UBERON:0003103,1.50e-20,43;UBERON:0003914,1.38e-18,47;UBERON:0003081,1.04e-11,87;UBERON:0010314,3.18e-08,92;UBERON:0000926,1.11e-07,120;UBERON:0004120,1.11e-07,120;UBERON:0006603,1.11e-07,120|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45590164952668,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0.210441855886474,0,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,6.83515049367156,4.92504725960302,5.94204802821349,7.33908680314152,7.47704080640135,8.02188987014367,9.76642567951713,7.24338183778972,7.70651259623319,8.55711219550098,5.58169377868924,8.35008738322314,7.74859933354261,5.92785311285837,4.56301823785264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0.325929952884052,0.339490171550376,0.234690248288502,0,0.238043640886014,0,0.315270288212382,0.221464689648775,0,0.327726629431476,0.345369963731791,0.578596234326046,0,0,0,0,0,0,0,2.27223834483936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.645857706783622,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.201932899896295,0.15241361331,0,0,0,0,0.680191150845634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0.824140228955577,0.320919209591815,0.758091635291392,0.760437899670719,0.754505365544305,0.936415074698824,0.448176066834085,0.689225627467359,0.476293691283074,0.579421629724277,1.54327376370964,0.824171801606613,1.32479028120958,0.342869252385415,0.887379030796687,0.715308569841963,1.74415699958794,1.12931256498397,0.676916863133412,0.73171189149109,0.526139422875686,0.950628796921032,0.561142271657738,0.830445126869219,0.788035859004508,0,0.619747364743864,0.385813221962283,0.499621155875892,0,0.644613162144895,0.57386499620653,0.661774257358546,0.695603506861264|short_description=p2@Fsd2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=244091 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BZ52,Q8C1E6 | |||
|association_with_transcript=-19bp_to_NM_172904,uc009icd.1_5end | |||
|cluster_id=chr7:88711886..88711897,- | |||
|description=CAGE_peak_2_at_Fsd2_5end | |||
|id=chr7:88711886..88711897,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!6.83e-16!18;UBERON:0000948!6.83e-16!18;UBERON:0005498!6.83e-16!18;UBERON:0004140!6.83e-16!18;UBERON:0009881!6.83e-16!18;UBERON:0004141!6.83e-16!18;UBERON:0003084!6.83e-16!18;UBERON:0007005!6.83e-16!18;UBERON:0004139!6.83e-16!18;UBERON:0004291!6.83e-16!18;UBERON:0004535!2.74e-11!23;UBERON:0001009!2.74e-11!23;UBERON:0004872!2.58e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.79e-52,18;UBERON:0000948,1.79e-52,18;UBERON:0005498,1.79e-52,18;UBERON:0004140,1.79e-52,18;UBERON:0009881,1.79e-52,18;UBERON:0004141,1.79e-52,18;UBERON:0003084,1.79e-52,18;UBERON:0007005,1.79e-52,18;UBERON:0004139,1.79e-52,18;UBERON:0004291,1.79e-52,18;UBERON:0004535,1.49e-40,23;UBERON:0001009,1.49e-40,23;UBERON:0004872,1.57e-27,33;UBERON:0003103,1.50e-20,43;UBERON:0003914,1.38e-18,47;UBERON:0003081,1.04e-11,87;UBERON:0010314,3.18e-08,92;UBERON:0000926,1.11e-07,120;UBERON:0004120,1.11e-07,120;UBERON:0006603,1.11e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45590164952668,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0.210441855886474,0,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,6.83515049367156,4.92504725960302,5.94204802821349,7.33908680314152,7.47704080640135,8.02188987014367,9.76642567951713,7.24338183778972,7.70651259623319,8.55711219550098,5.58169377868924,8.35008738322314,7.74859933354261,5.92785311285837,4.56301823785264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0.325929952884052,0.339490171550376,0.234690248288502,0,0.238043640886014,0,0.315270288212382,0.221464689648775,0,0.327726629431476,0.345369963731791,0.578596234326046,0,0,0,0,0,0,0,2.27223834483936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.645857706783622,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.201932899896295,0.15241361331,0,0,0,0,0.680191150845634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0.824140228955577,0.320919209591815,0.758091635291392,0.760437899670719,0.754505365544305,0.936415074698824,0.448176066834085,0.689225627467359,0.476293691283074,0.579421629724277,1.54327376370964,0.824171801606613,1.32479028120958,0.342869252385415,0.887379030796687,0.715308569841963,1.74415699958794,1.12931256498397,0.676916863133412,0.73171189149109,0.526139422875686,0.950628796921032,0.561142271657738,0.830445126869219,0.788035859004508,0,0.619747364743864,0.385813221962283,0.499621155875892,0,0.644613162144895,0.57386499620653,0.661774257358546,0.695603506861264 | |||
|short_description=p2@Fsd2 | |||
}} |
Latest revision as of 04:15, 27 September 2015
Short description: | p2@Fsd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fsd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | -19bp_to_NM_172904, uc009icd.1_5end |
EntrezGene: | Fsd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.79e-52 | 18 |
heart | 1.79e-52 | 18 |
primitive heart tube | 1.79e-52 | 18 |
primary heart field | 1.79e-52 | 18 |
anterior lateral plate mesoderm | 1.79e-52 | 18 |
heart tube | 1.79e-52 | 18 |
heart primordium | 1.79e-52 | 18 |
cardiac mesoderm | 1.79e-52 | 18 |
cardiogenic plate | 1.79e-52 | 18 |
heart rudiment | 1.79e-52 | 18 |
cardiovascular system | 1.49e-40 | 23 |
circulatory system | 1.49e-40 | 23 |
splanchnic layer of lateral plate mesoderm | 1.57e-27 | 33 |
compound organ | 1.50e-20 | 43 |
epithelial tube | 1.38e-18 | 47 |
lateral plate mesoderm | 1.04e-11 | 87 |
structure with developmental contribution from neural crest | 3.18e-08 | 92 |
mesoderm | 1.11e-07 | 120 |
mesoderm-derived structure | 1.11e-07 | 120 |
presumptive mesoderm | 1.11e-07 | 120 |