FFCP PHASE1:Mm9::chr8:107058530..107058546,-: Difference between revisions
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{{FFCP|EntrezGene=234664|HGNC=|MCL_coexpression_id=17|UniProt=Q8VBW6,E0CZE0,Q3UK27|association_with_transcript=0bp_to_ENSMUST00000034349,ENSMUST00000162466,NM_144931,uc009nas.2_5end|description=CAGE_peak_2_at_Nae1_5end|id=chr8:107058530..107058546,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.72e-09!63;UBERON:0002346!6.39e-08!71;UBERON:0003075!6.39e-08!71;UBERON:0007284!6.39e-08!71;UBERON:0003056!5.90e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.73e-10,92;UBERON:0002346,3.29e-09,64;UBERON:0003075,3.29e-09,64;UBERON:0007284,3.29e-09,64;UBERON:0010371,2.76e-08,73;UBERON:0000073,1.92e-07,54;UBERON:0003056,6.01e-07,49|phase1_expression=7.68714466103011,4.18770489167233,1.81999695755814,3.0246421130683,1.50268718983904,1.6787927191189,2.56973904655078,4.00282302668886,3.66050677594334,2.57470978954193,2.05461561870606,1.59544317990673,4.45121897821135,2.79745287740792,3.66420737997229,3.84703008040669,4.19737126876888,3.3123527362615,4.2505474417779,6.36584477697045,12.3312770719051,2.87943758482567,1.82839852397255,3.19984845586813,4.12936705920906,3.44539178469012,2.58457197695445,2.15471232685889,3.99049180858385,3.2763916868791,2.43903561720835,2.54012269383853,1.23012957516914,0,3.75507105676657,2.1610503896604,3.06254034393554,2.92972141515835,5.4693474116666,4.18818995179039,2.94115744015507,4.09827290975067,2.91306211818692,4.65818226509636,4.35920804243913,4.03802854755699,0.782391344348039,0.65407546914134,0.659058548203415,0.777719596297134,0.55994568650145,1.43752564364972,5.36904339384756,4.35217285206807,4.7053131879945,3.60163210450326,4.01146815914259,5.15672092277442,2.63011399117477,1.05798195854407,1.26766280701236,0.677689064138264,1.77858959222228,0.899899717281399,0.988866362566974,0,0.299600110518405,0.384218305321555,4.66603255388149,2.16009501330705,2.94454945891935,4.85606673486466,4.19650227808066,4.16468717330844,2.49198224647415,2.75765635983006,9.91042928994498,8.2996769755372,8.60196586234964,2.2420668914133,1.37231465403614,5.2091337055676,6.14202597803038,10.1297269805702,11.4598685832608,6.77645746589436,7.68807076315156,7.26957838718672,5.75519069332199,5.44115232768856,3.18850937571846,3.44169550792555,4.0798280022465,3.2382191498269,1.94932925234301,7.6164570806547,3.65155492342555,5.11290967734173,2.85764605063156,3.18005617059306,5.21120653173718,1.28326477414318,5.09610479413291,14.2213340630666,6.71122227134764,5.57391704045217,2.52762222507392,3.31133251185274,5.17875767294343,4.89859058913922,2.4287945747259,2.43572382649713,2.53677046981664,4.22023393547343,5.87943535678524,3.39299796590124,4.94389935468748,2.60278842455841,1.76922110389975,5.82360659810673,3.75430581382669,4.84875253135222,1.86391761218122,10.5401086924157,13.1951425292477,4.85368404896324,4.79260498023681,3.59941638596045,4.44745794755726,9.8861822007183,6.8625090422794,13.6963243803022,5.56237824615285,7.41574826257959,8.10373373782284,10.058958310201,7.33243419722277,3.6078021476927,3.53811861807145,5.26104639716185,4.81445638962004,5.0578462975364,5.58192602396583,6.32960234910003,8.84474488967262,7.30248205623644,7.30873451565885,6.72628763921441,4.095791865724,6.24050064553804,8.79755620819744,4.82230611340665,4.44875598760957,4.179025998266,2.88094990971121,4.77682240364384,2.1066395619397,3.86021860672073,4.26245249093389,5.17814431338755,4.22146907965973,3.6012412292203,5.44512891845984,4.13204886669548,4.47374627373397,3.95307706075693,4.02410102099429,7.70651259623319,5.59503489705834,6.07419617092652,6.16122952548504,6.57899943413995,6.58650345873152,6.57611451925822,8.41159794256509,12.657267322652,2.64335026387038,2.3800550999719,4.69234151177515,5.10920678092965,4.12375876230699,3.83198696784351,2.2237804384487,3.42406127002606,1.42358718463353,4.28217282282428,3.2673577144035,2.38747766449381,3.8992817423824,0.898819408654221,3.02593269824572,3.38540164532424,2.27601481143698,4.22719496655997,1.1270773567308,4.88763186828754,2.90928730751439,6.73303870947058,4.93244989569207,4.87113488332687,6.75094529717912,3.45512058981041,2.96452627087149,2.66952169145751,2.16214894624523,2.47348323623339,3.44862206360455,1.4470629585145,1.01850340712568,1.72617682470486,3.08056930872567,1.64736847912849,5.75072826109418,1.86070473834252,3.12037673114561,1.51547326768267,3.22915344339442,5.78932225636041,3.51031061316549,7.20067364727842,6.19266910479698,3.90413697282933,3.28566347603903,4.85768146581266,3.33261097240419,6.24427673144956,4.72905432318573,5.97954662051692,4.30527875375215,3.93271955317771,3.10832967358612,5.20736610893442,3.01582567878545,4.89515115436839,1.96705709207614,1.37968373152366,9.9541365792431,13.1277088983268,2.95082901678016,7.32165688892682,5.36363973007636,4.29482618726302,4.73931475012158,4.06246956519338,5.34716817797746,4.81230102341015,4.04810701674894,3.79932615284705,3.95287777946523,6.74774764485795,4.40014264145633,3.2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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=234664 | |||
|HGNC= | |||
|MCL_coexpression_id=17 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VBW6,E0CZE0,Q3UK27 | |||
|association_with_transcript=0bp_to_ENSMUST00000034349,ENSMUST00000162466,NM_144931,uc009nas.2_5end | |||
|cluster_id=chr8:107058530..107058546,- | |||
|description=CAGE_peak_2_at_Nae1_5end | |||
|id=chr8:107058530..107058546,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.72e-09!63;UBERON:0002346!6.39e-08!71;UBERON:0003075!6.39e-08!71;UBERON:0007284!6.39e-08!71;UBERON:0003056!5.90e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.73e-10,92;UBERON:0002346,3.29e-09,64;UBERON:0003075,3.29e-09,64;UBERON:0007284,3.29e-09,64;UBERON:0010371,2.76e-08,73;UBERON:0000073,1.92e-07,54;UBERON:0003056,6.01e-07,49 | |||
|phase1_expression=7.68714466103011,4.18770489167233,1.81999695755814,3.0246421130683,1.50268718983904,1.6787927191189,2.56973904655078,4.00282302668886,3.66050677594334,2.57470978954193,2.05461561870606,1.59544317990673,4.45121897821135,2.79745287740792,3.66420737997229,3.84703008040669,4.19737126876888,3.3123527362615,4.2505474417779,6.36584477697045,12.3312770719051,2.87943758482567,1.82839852397255,3.19984845586813,4.12936705920906,3.44539178469012,2.58457197695445,2.15471232685889,3.99049180858385,3.2763916868791,2.43903561720835,2.54012269383853,1.23012957516914,0,3.75507105676657,2.1610503896604,3.06254034393554,2.92972141515835,5.4693474116666,4.18818995179039,2.94115744015507,4.09827290975067,2.91306211818692,4.65818226509636,4.35920804243913,4.03802854755699,0.782391344348039,0.65407546914134,0.659058548203415,0.777719596297134,0.55994568650145,1.43752564364972,5.36904339384756,4.35217285206807,4.7053131879945,3.60163210450326,4.01146815914259,5.15672092277442,2.63011399117477,1.05798195854407,1.26766280701236,0.677689064138264,1.77858959222228,0.899899717281399,0.988866362566974,0,0.299600110518405,0.384218305321555,4.66603255388149,2.16009501330705,2.94454945891935,4.85606673486466,4.19650227808066,4.16468717330844,2.49198224647415,2.75765635983006,9.91042928994498,8.2996769755372,8.60196586234964,2.2420668914133,1.37231465403614,5.2091337055676,6.14202597803038,10.1297269805702,11.4598685832608,6.77645746589436,7.68807076315156,7.26957838718672,5.75519069332199,5.44115232768856,3.18850937571846,3.44169550792555,4.0798280022465,3.2382191498269,1.94932925234301,7.6164570806547,3.65155492342555,5.11290967734173,2.85764605063156,3.18005617059306,5.21120653173718,1.28326477414318,5.09610479413291,14.2213340630666,6.71122227134764,5.57391704045217,2.52762222507392,3.31133251185274,5.17875767294343,4.89859058913922,2.4287945747259,2.43572382649713,2.53677046981664,4.22023393547343,5.87943535678524,3.39299796590124,4.94389935468748,2.60278842455841,1.76922110389975,5.82360659810673,3.75430581382669,4.84875253135222,1.86391761218122,10.5401086924157,13.1951425292477,4.85368404896324,4.79260498023681,3.59941638596045,4.44745794755726,9.8861822007183,6.8625090422794,13.6963243803022,5.56237824615285,7.41574826257959,8.10373373782284,10.058958310201,7.33243419722277,3.6078021476927,3.53811861807145,5.26104639716185,4.81445638962004,5.0578462975364,5.58192602396583,6.32960234910003,8.84474488967262,7.30248205623644,7.30873451565885,6.72628763921441,4.095791865724,6.24050064553804,8.79755620819744,4.82230611340665,4.44875598760957,4.179025998266,2.88094990971121,4.77682240364384,2.1066395619397,3.86021860672073,4.26245249093389,5.17814431338755,4.22146907965973,3.6012412292203,5.44512891845984,4.13204886669548,4.47374627373397,3.95307706075693,4.02410102099429,7.70651259623319,5.59503489705834,6.07419617092652,6.16122952548504,6.57899943413995,6.58650345873152,6.57611451925822,8.41159794256509,12.657267322652,2.64335026387038,2.3800550999719,4.69234151177515,5.10920678092965,4.12375876230699,3.83198696784351,2.2237804384487,3.42406127002606,1.42358718463353,4.28217282282428,3.2673577144035,2.38747766449381,3.8992817423824,0.898819408654221,3.02593269824572,3.38540164532424,2.27601481143698,4.22719496655997,1.1270773567308,4.88763186828754,2.90928730751439,6.73303870947058,4.93244989569207,4.87113488332687,6.75094529717912,3.45512058981041,2.96452627087149,2.66952169145751,2.16214894624523,2.47348323623339,3.44862206360455,1.4470629585145,1.01850340712568,1.72617682470486,3.08056930872567,1.64736847912849,5.75072826109418,1.86070473834252,3.12037673114561,1.51547326768267,3.22915344339442,5.78932225636041,3.51031061316549,7.20067364727842,6.19266910479698,3.90413697282933,3.28566347603903,4.85768146581266,3.33261097240419,6.24427673144956,4.72905432318573,5.97954662051692,4.30527875375215,3.93271955317771,3.10832967358612,5.20736610893442,3.01582567878545,4.89515115436839,1.96705709207614,1.37968373152366,9.9541365792431,13.1277088983268,2.95082901678016,7.32165688892682,5.36363973007636,4.29482618726302,4.73931475012158,4.06246956519338,5.34716817797746,4.81230102341015,4.04810701674894,3.79932615284705,3.95287777946523,6.74774764485795,4.40014264145633,3.20518086601059,7.81857404897165,4.61916344323099,2.65490276679926,3.15614827001476,3.02323556964751,3.20628635585027,1.18120757152309,3.07435147943927,4.39328098385976,4.36240475373007,4.63446591900138,1.8962205476149,4.21674434299995,2.06271086496374,8.5109901438447,5.58189391497062,1.03486947026204,7.50179622610573,5.14286677562593,5.52943334566419,3.62007845324666,3.04464949114599,1.87737366450968,3.38931313382112,3.08739757276947,2.80306630000516,4.52100394748536,5.00597276903694,4.17803204010978,4.43180429311665,2.91480836629851,11.1255181206306,1.53783792718067,2.06386867963222,2.96311243791539,2.26042148405629,2.1871076435364,3.43167259809784,6.28920190977265,5.59805809294632,5.66619892598138,0,5.53587988766987,4.06638934253697,4.53622431451565,3.345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| |||
|short_description=p2@Nae1 | |||
}} |
Latest revision as of 06:47, 27 September 2015
Short description: | p2@Nae1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nae1_5end |
Coexpression cluster: | MCL_coexpression_mm9:17 |
Association with transcript: | 0bp_to_ENSMUST00000034349, ENSMUST00000162466, NM_144931, uc009nas.2_5end |
EntrezGene: | Nae1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.73e-10 | 92 |
neurectoderm | 3.29e-09 | 64 |
neural plate | 3.29e-09 | 64 |
presumptive neural plate | 3.29e-09 | 64 |
ecto-epithelium | 2.76e-08 | 73 |
regional part of nervous system | 1.92e-07 | 54 |
pre-chordal neural plate | 6.01e-07 | 49 |