FFCP PHASE1:Hg19::chr1:151040448..151040470,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:151040448..151040470,+ | |||
|coexpression_cluster_id=C1173 | |coexpression_cluster_id=C1173 | ||
|description=CAGE_peak_at_chr1:151040448..151040470,+ | |description=CAGE_peak_at_chr1:151040448..151040470,+ | ||
Latest revision as of 21:20, 27 July 2015
| Short description: | p@chr1:151040448..151040470, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr1:151040448..151040470, + |
| Coexpression cluster: | C1173_medial_Neurons_parietal_temporal_medulloblastoma_occipital_duodenum |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr1:151040448..151040470+ |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuron | 2.00e-14 | 6 |
| neuroblast | 2.00e-14 | 6 |
| electrically signaling cell | 2.00e-14 | 6 |
| neuronal stem cell | 5.87e-11 | 8 |
| lung fibroblast | 1.57e-10 | 1 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| neocortex | 7.78e-21 | 20 |
| regional part of cerebral cortex | 5.78e-19 | 22 |
| nervous system | 3.83e-17 | 89 |
| cerebral cortex | 1.07e-16 | 25 |
| pallium | 1.07e-16 | 25 |
| central nervous system | 1.72e-16 | 81 |
| brain grey matter | 7.76e-16 | 34 |
| gray matter | 7.76e-16 | 34 |
| regional part of telencephalon | 5.28e-13 | 32 |
| cerebral hemisphere | 5.28e-13 | 32 |
Showing 1 to 10 of 40 entries
