FFCP PHASE1:Hg19::chr11:117695265..117695283,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=486 | |EntrezGene=486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=4026 | |HGNC=4026 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=175bp_to_ENST00000534383_5end | |association_with_transcript=175bp_to_ENST00000534383_5end | ||
|cluster_id=chr11:117695265..117695283,- | |||
|description=CAGE_peak_9_at_FXYD2_5end | |description=CAGE_peak_9_at_FXYD2_5end | ||
|id=chr11:117695265..117695283,- | |id=chr11:117695265..117695283,- | ||
Latest revision as of 22:07, 15 September 2015
| Short description: | p9@FXYD2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_9_at_FXYD2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 175bp_to_ENST00000534383_5end |
| EntrezGene: | FXYD2 |
| HGNC: | 4026 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p9@FXYD2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| kidney tubule cell | 7.82e-12 | 10 |
| nephron tubule epithelial cell | 7.82e-12 | 10 |
| hepatocyte | 6.28e-10 | 12 |
| epithelial cell of nephron | 4.54e-08 | 15 |
| smooth muscle cell of the internal thoracic artery | 2.25e-07 | 2 |
| mesangial cell | 2.40e-07 | 2 |
| kidney interstitial cell | 2.40e-07 | 2 |
| juxtaglomerular complex cell | 2.40e-07 | 2 |
| renal interstitial pericyte | 2.40e-07 | 2 |
| extraglomerular mesangial cell | 2.40e-07 | 2 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| abdomen element | 7.02e-14 | 54 |
| abdominal segment element | 7.02e-14 | 54 |
| abdominal segment of trunk | 2.06e-12 | 60 |
| abdomen | 2.06e-12 | 60 |
| epithelium of foregut-midgut junction | 2.51e-12 | 25 |
| anatomical boundary | 2.51e-12 | 25 |
| hepatobiliary system | 2.51e-12 | 25 |
| foregut-midgut junction | 2.51e-12 | 25 |
| septum transversum | 2.51e-12 | 25 |
| nephron tubule epithelium | 7.82e-12 | 10 |
Showing 1 to 10 of 38 entries
| Ontology term | p-value | n |
|---|---|---|
| non-Hodgkin lymphoma | 8.58e-14 | 1 |
| cutaneous T cell lymphoma | 8.58e-14 | 1 |
| mycosis fungoides | 8.58e-14 | 1 |
| clear cell adenocarcinoma | 9.25e-08 | 2 |
| signet ring cell adenocarcinoma | 1.64e-07 | 2 |
Showing 1 to 5 of 5 entries
