FFCP PHASE1:Hg19::chr11:123501964..123501974,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=55800 | |EntrezGene=55800 | ||
| Line 8: | Line 8: | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_AK055033_5end | |association_with_transcript=-27bp_to_AK055033_5end | ||
|cluster_id=chr11:123501964..123501974,- | |||
|coexpression_cluster_id=C16 | |coexpression_cluster_id=C16 | ||
|description=CAGE_peak_24_at_SCN3B_5end | |description=CAGE_peak_24_at_SCN3B_5end | ||
Latest revision as of 10:15, 16 September 2015
| Short description: | p24@SCN3B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_24_at_SCN3B_5end |
| Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
| Association with transcript: | -27bp_to_AK055033_5end |
| EntrezGene: | SCN3B |
| HGNC: | 20665 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p24@SCN3B |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| temporal lobe | 3.65e-29 | 6 |
| middle temporal gyrus | 4.32e-26 | 2 |
| neocortex | 5.11e-22 | 20 |
| regional part of cerebral cortex | 3.39e-20 | 22 |
| cerebral cortex | 5.50e-18 | 25 |
| pallium | 5.50e-18 | 25 |
| regional part of telencephalon | 2.21e-14 | 32 |
| cerebral hemisphere | 2.21e-14 | 32 |
| brain grey matter | 1.29e-13 | 34 |
| gray matter | 1.29e-13 | 34 |
Showing 1 to 10 of 28 entries
