FFCP PHASE1:Mm9::chr14:23969065..23969095,+: Difference between revisions
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|id=chr14:23969065..23969095,+
|short_description=p@chr14:23969065..23969095,+
|description=CAGE_peak_at_chr14:23969065..23969095,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:23969065..23969095,+ | |||
|description=CAGE_peak_at_chr14:23969065..23969095,+ | |||
|id=chr14:23969065..23969095,+ | |||
|ontology_enrichment_celltype=CL:0000473!9.41e-08!3;CL:0000627!9.41e-08!3;CL:0000682!9.41e-08!3;CL:0000192!7.08e-07!3;CL:0000359!7.08e-07!3;CL:0002539!7.08e-07!3;CL:0000514!7.08e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.54e-18,3;CL:0000066,1.72e-17,25;CL:0000239,3.08e-15,6;CL:0000677,3.08e-15,6;CL:0000584,3.08e-15,6;CL:0002076,3.38e-13,15;CL:0000075,4.26e-13,7;CL:0002563,3.10e-10,9;CL:0002251,3.10e-10,9;CL:0000223,8.38e-10,20;CL:0002293,1.55e-08,3;CL:0000473,3.77e-08,7;CL:0000192,5.02e-08,3;CL:0000359,5.02e-08,3;CL:0002539,5.02e-08,3;CL:0000514,5.02e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.20e-09!23;UBERON:0000974!1.20e-09!23;UBERON:0004807!1.20e-09!23;UBERON:0005058!1.20e-09!23;UBERON:0003351!1.20e-09!23;UBERON:0009113!1.20e-09!23;UBERON:0003295!1.20e-09!23;UBERON:0009722!1.20e-09!23;UBERON:0005562!1.20e-09!23;UBERON:0007690!1.20e-09!23;UBERON:0006562!3.91e-09!24;UBERON:0003408!3.91e-09!24;UBERON:0001557!3.91e-09!24;UBERON:0001042!3.91e-09!24;UBERON:0008814!3.91e-09!24;UBERON:0009145!3.91e-09!24;UBERON:0000947!3.14e-08!4;UBERON:0001637!3.14e-08!4;UBERON:0003509!3.14e-08!4;UBERON:0004573!3.14e-08!4;UBERON:0004571!3.14e-08!4;UBERON:0010191!3.14e-08!4;UBERON:0004572!3.14e-08!4;UBERON:0000072!7.99e-08!27;UBERON:0000490!2.14e-07!66;UBERON:0004177!4.18e-07!29;UBERON:0001135!7.08e-07!3;UBERON:0004237!7.08e-07!3;UBERON:0004695!7.08e-07!3;UBERON:0002111!7.08e-07!3;UBERON:0004178!7.08e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.45e-17,15;UBERON:0001962,1.06e-11,2;UBERON:0001961,1.06e-11,2;UBERON:0001744,1.06e-11,2;UBERON:0004923,1.30e-10,24;UBERON:0001242,1.32e-10,13;UBERON:0001262,1.32e-10,13;UBERON:0004786,1.32e-10,13;UBERON:0003350,3.10e-10,9;UBERON:0004808,3.10e-10,9;UBERON:0001277,3.10e-10,9;UBERON:0000485,2.09e-08,11;UBERON:0002465,4.26e-08,3;UBERON:0001135,5.02e-08,3;UBERON:0004237,5.02e-08,3;UBERON:0004695,5.02e-08,3;UBERON:0002111,5.02e-08,3;UBERON:0004178,5.02e-08,3;UBERON:0000996,6.93e-07,1 | |||
|phase1_expression=0,1.74487703819681,3.63999391511629,0,0,2.68606835059024,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.75991665072747,1.60586496747019,4.01962374880514,8.18447792702242,7.75696437669201,0,0,1.55211357458713,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,1.00717454380462,2.23029248682932,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511290967734173,0,0.35333957451034,0,0,2.54805239706646,7.11066703153331,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0.631325567659422,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0,1.29614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.240390899039938,0.147689527174577,0.504832249740738,0.381034033274999,0.403304740547362,0.584747284438515,0.288635524920988,0.350630706544707,0,0,0,0,0,0,0.36630324853453,2.57242054894879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,1.74487703819681,3.63999391511629,0,0,2.68606835059024,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.75991665072747,1.60586496747019,4.01962374880514,8.18447792702242,7.75696437669201,0,0,1.55211357458713,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,1.00717454380462,2.23029248682932,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511290967734173,0,0.35333957451034,0,0,2.54805239706646,7.11066703153331,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0.631325567659422,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0,1.29614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.240390899039938,0.147689527174577,0.504832249740738,0.381034033274999,0.403304740547362,0.584747284438515,0.288635524920988,0.350630706544707,0,0,0,0,0,0,0.36630324853453,2.57242054894879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr14:23969065..23969095,+ | |||
}} | }} |
Latest revision as of 03:45, 4 August 2015
Short description: | p@chr14:23969065..23969095, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:23969065..23969095, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.54e-18 | 3 |
epithelial cell | 1.72e-17 | 25 |
brush border epithelial cell | 3.08e-15 | 6 |
gut absorptive cell | 3.08e-15 | 6 |
enterocyte | 3.08e-15 | 6 |
endo-epithelial cell | 3.38e-13 | 15 |
columnar/cuboidal epithelial cell | 4.26e-13 | 7 |
intestinal epithelial cell | 3.10e-10 | 9 |
epithelial cell of alimentary canal | 3.10e-10 | 9 |
endodermal cell | 8.38e-10 | 20 |
epithelial cell of thymus | 1.55e-08 | 3 |
defensive cell | 3.77e-08 | 7 |
smooth muscle cell | 5.02e-08 | 3 |
vascular associated smooth muscle cell | 5.02e-08 | 3 |
aortic smooth muscle cell | 5.02e-08 | 3 |
smooth muscle myoblast | 5.02e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.45e-17 | 15 |
gut-associated lymphoid tissue | 1.06e-11 | 2 |
mucosa-associated lymphoid tissue | 1.06e-11 | 2 |
lymphoid tissue | 1.06e-11 | 2 |
organ component layer | 1.30e-10 | 24 |
intestinal mucosa | 1.32e-10 | 13 |
wall of intestine | 1.32e-10 | 13 |
gastrointestinal system mucosa | 1.32e-10 | 13 |
epithelium of mucosa | 3.10e-10 | 9 |
gastrointestinal system epithelium | 3.10e-10 | 9 |
intestinal epithelium | 3.10e-10 | 9 |
simple columnar epithelium | 2.09e-08 | 11 |
lymphoid system | 4.26e-08 | 3 |
smooth muscle tissue | 5.02e-08 | 3 |
blood vessel smooth muscle | 5.02e-08 | 3 |
arterial system smooth muscle | 5.02e-08 | 3 |
artery smooth muscle tissue | 5.02e-08 | 3 |
aorta smooth muscle tissue | 5.02e-08 | 3 |
vagina | 6.93e-07 | 1 |