DOID:4305: Difference between revisions
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|name=bone giant cell tumor | |name=bone giant cell tumor | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:51, 12 September 2014
| Name: | bone giant cell tumor | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A giant cell tumor and bone cancer and bone tissue neoplasm that results_in the presence of multinucleated giant cells (osteoclast-like cell)." [url:http://en.wikipedia.org/wiki/Giant_cell_tumor_of_bone] | ||
| Xrefs: |
| ||
| Synonyms: |
"giant cell myeloma" RELATED [] "Giant cell neoplasm of bone" EXACT [NCI2004_11_17:C3738] "Giant cell tumor of bone (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:57500000] "Giant cell tumor of bone NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189891002] "osteoclastoma" RELATED [] |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:200(giant cell tumor) |
|---|
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10704-109H2 (osteoclastoma cell line:Hs 706.T)
- 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)
- 10731-110B2
Mouse (Mus musculus)
- 10704-109H2 (osteoclastoma cell line:Hs 706.T)
- 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)
- 10731-110B2
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:4305 (bone giant cell tumor), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE1:Hg19::chr16:77317713..77317723,+#_7ed111051ee50c8d468df346ae9ad8c4 | p1@CU687665 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr16:77317713..77317723,+#_7ed111051ee50c8d468df346ae9ad8c4 | p1@CU687665 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:101742272..101742276,-#_7ed111051ee50c8d468df346ae9ad8c4 | p@chr11:101742272..101742276, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:101742272..101742276,-#_7ed111051ee50c8d468df346ae9ad8c4 | p@chr11:101742272..101742276, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr18:71197490..71197495,-#_e0f6011b79f6ab97eaf39001b71c40d1 | p@chr18:71197490..71197495, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chr16:51670868..51670880,-#_e0f6011b79f6ab97eaf39001b71c40d1 | p@chr16:51670868..51670880, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chr11:81551043..81551054,-#_e0f6011b79f6ab97eaf39001b71c40d1 | p@chr11:81551043..81551054, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr16:51670868..51670880,-#_e0f6011b79f6ab97eaf39001b71c40d1 | p@chr16:51670868..51670880, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr11:81551043..81551054,-#_e0f6011b79f6ab97eaf39001b71c40d1 | p@chr11:81551043..81551054, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chr18:71197490..71197495,-#_e0f6011b79f6ab97eaf39001b71c40d1 | p@chr18:71197490..71197495, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr5:14034644..14034647,-#_e0f6011b79f6ab97eaf39001b71c40d1 | p@chr5:14034644..14034647, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chr5:14034644..14034647,-#_e0f6011b79f6ab97eaf39001b71c40d1 | p@chr5:14034644..14034647, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr3:106393655..106393659,+#_9ef95a30dedef4f0008d93116c9046f7 | p@chr3:106393655..106393659, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr3:106393655..106393659,+#_9ef95a30dedef4f0008d93116c9046f7 | p@chr3:106393655..106393659, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr3:45174403..45174415,+#_9ef95a30dedef4f0008d93116c9046f7 | p@chr3:45174403..45174415, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr3:45174403..45174415,+#_9ef95a30dedef4f0008d93116c9046f7 | p@chr3:45174403..45174415, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr5:23952305..23952310,+#_9ef95a30dedef4f0008d93116c9046f7 | p@chr5:23952305..23952310, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr5:23952305..23952310,+#_9ef95a30dedef4f0008d93116c9046f7 | p@chr5:23952305..23952310, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr4:34480309..34480321,-#_9ef95a30dedef4f0008d93116c9046f7 | p@chr4:34480309..34480321, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr4:34480309..34480321,-#_9ef95a30dedef4f0008d93116c9046f7 | p@chr4:34480309..34480321, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr4:177796841..177796851,+#_ab62f2cc60b1de40435821172856fd1b | p1@ENST00000508790 |
| 3.61e-34 | FFCP PHASE1:Hg19::chr4:177796841..177796851,+#_ab62f2cc60b1de40435821172856fd1b | p1@ENST00000508790 |
| 3.61e-34 | FFCP PHASE1:Hg19::chr7:119353807..119353812,-#_ab62f2cc60b1de40435821172856fd1b | p@chr7:119353807..119353812, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr7:119353807..119353812,-#_ab62f2cc60b1de40435821172856fd1b | p@chr7:119353807..119353812, - |
| 5.04e-34 | FFCP PHASE2:Hg19::chr10:37004821..37004852,-#_f41b98629bbbd04915bd67b54a96957f | p@chr10:37004821..37004852, - |
| 5.04e-34 | FFCP PHASE1:Hg19::chr8:15939682..15939688,+#_f41b98629bbbd04915bd67b54a96957f | p@chr8:15939682..15939688, + |
| 5.04e-34 | FFCP PHASE2:Hg19::chr8:15939682..15939688,+#_f41b98629bbbd04915bd67b54a96957f | p@chr8:15939682..15939688, + |
| 5.04e-34 | FFCP PHASE2:Hg19::chrX:132231123..132231140,-#_f41b98629bbbd04915bd67b54a96957f | p1@USP26 |
| 5.04e-34 | FFCP PHASE1:Hg19::chrX:132231123..132231140,-#_f41b98629bbbd04915bd67b54a96957f | p1@USP26 |
| 5.04e-34 | FFCP PHASE2:Hg19::chr4:46093758..46093781,-#_f41b98629bbbd04915bd67b54a96957f | p@chr4:46093758..46093781, - |
| 5.04e-34 | FFCP PHASE1:Hg19::chr10:37004821..37004852,-#_f41b98629bbbd04915bd67b54a96957f | p@chr10:37004821..37004852, - |
| 5.04e-34 | FFCP PHASE1:Hg19::chr4:46093758..46093781,-#_f41b98629bbbd04915bd67b54a96957f | p@chr4:46093758..46093781, - |
| 7.05e-34 | FFCP PHASE1:Hg19::chr11:84019133..84019135,-#_d4769f045c502929ac3c7af5f4396835 | p@chr11:84019133..84019135, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chrX:89462083..89462089,+#_d4769f045c502929ac3c7af5f4396835 | p@chrX:89462083..89462089, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chrX:89462083..89462089,+#_d4769f045c502929ac3c7af5f4396835 | p@chrX:89462083..89462089, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr11:84019133..84019135,-#_d4769f045c502929ac3c7af5f4396835 | p@chr11:84019133..84019135, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr6:155427848..155427862,+#_d4769f045c502929ac3c7af5f4396835 | p@chr6:155427848..155427862, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr6:155427848..155427862,+#_d4769f045c502929ac3c7af5f4396835 | p@chr6:155427848..155427862, + |
| 5.5e-31 | FFCP PHASE2:Hg19::chr3:106556598..106556609,-#_e496c2c709cd2dcf224911a87bc128ac | p@chr3:106556598..106556609, - |
| 5.5e-31 | FFCP PHASE1:Hg19::chr3:106556598..106556609,-#_e496c2c709cd2dcf224911a87bc128ac | p@chr3:106556598..106556609, - |
| 7.1e-28 | FFCP PHASE1:Hg19::chr6:68597008..68597030,-#_bb53379a2eb545bfdf745f2ac32e98b7 | p@chr6:68597008..68597030, - |
| 7.1e-28 | FFCP PHASE2:Hg19::chr6:68597008..68597030,-#_bb53379a2eb545bfdf745f2ac32e98b7 | p@chr6:68597008..68597030, - |
| 4.32e-26 | FFCP PHASE2:Hg19::chr5:27723923..27723927,-#_7deba072a8e859155596e968775af6cb | p@chr5:27723923..27723927, - |
| 4.32e-26 | FFCP PHASE1:Hg19::chr11:81549961..81549965,-#_7deba072a8e859155596e968775af6cb | p@chr11:81549961..81549965, - |
| 4.32e-26 | FFCP PHASE1:Hg19::chr5:27723923..27723927,-#_7deba072a8e859155596e968775af6cb | p@chr5:27723923..27723927, - |
| 4.32e-26 | FFCP PHASE2:Hg19::chr11:81549961..81549965,-#_7deba072a8e859155596e968775af6cb | p@chr11:81549961..81549965, - |
| 5.56e-26 | FFCP PHASE2:Hg19::chr5:167315847..167315852,+#_c80d487a6e817589c900afbb93dbfd90 | p@chr5:167315847..167315852, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr5:167315847..167315852,+#_c80d487a6e817589c900afbb93dbfd90 | p@chr5:167315847..167315852, + |
| 5.56e-26 | FFCP PHASE2:Hg19::chrX:89176902..89176913,+#_c80d487a6e817589c900afbb93dbfd90 | p1@TGIF2LX |
| 5.56e-26 | FFCP PHASE1:Hg19::chrX:89176902..89176913,+#_c80d487a6e817589c900afbb93dbfd90 | p1@TGIF2LX |
| 5.56e-26 | FFCP PHASE2:Hg19::chrX:124347061..124347063,-#_c80d487a6e817589c900afbb93dbfd90 | p@chrX:124347061..124347063, - |
| 5.56e-26 | FFCP PHASE1:Hg19::chrX:124347061..124347063,-#_c80d487a6e817589c900afbb93dbfd90 | p@chrX:124347061..124347063, - |
| 5.56e-26 | FFCP PHASE2:Hg19::chrX:132352373..132352384,-#_c80d487a6e817589c900afbb93dbfd90 | p1@TFDP3 |
| 5.56e-26 | FFCP PHASE1:Hg19::chrX:132352373..132352384,-#_c80d487a6e817589c900afbb93dbfd90 | p1@TFDP3 |
| 5.56e-26 | FFCP PHASE2:Hg19::chr5:153673183..153673186,+#_c80d487a6e817589c900afbb93dbfd90 | p@chr5:153673183..153673186, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr5:153673183..153673186,+#_c80d487a6e817589c900afbb93dbfd90 | p@chr5:153673183..153673186, + |
| 5.56e-26 | FFCP PHASE2:Hg19::chr4:189864018..189864037,+#_c80d487a6e817589c900afbb93dbfd90 | p@chr4:189864018..189864037, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr4:189864018..189864037,+#_c80d487a6e817589c900afbb93dbfd90 | p@chr4:189864018..189864037, + |
| 9.18e-26 | FFCP PHASE1:Hg19::chr7:12997533..12997536,+#_7cb554a3be6f1e1f1750765ed49edd61 | p@chr7:12997533..12997536, + |
| 9.18e-26 | FFCP PHASE2:Hg19::chr7:12997533..12997536,+#_7cb554a3be6f1e1f1750765ed49edd61 | p@chr7:12997533..12997536, + |
| 9.18e-26 | FFCP PHASE1:Hg19::chr18:14946224..14946236,+#_7cb554a3be6f1e1f1750765ed49edd61 | p1@FLJ44255 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr18:14946224..14946236,+#_7cb554a3be6f1e1f1750765ed49edd61 | p1@FLJ44255 |
| 1.12e-25 | FFCP PHASE2:Hg19::chrX:55246809..55246816,+#_ea35632256d617fc4aa7782b62ea6c01 | p3@PAGE5 |
| 1.12e-25 | FFCP PHASE1:Hg19::chrX:55246809..55246816,+#_ea35632256d617fc4aa7782b62ea6c01 | p3@PAGE5 |
| 4.89e-23 | FFCP PHASE2:Hg19::chrX:55246818..55246829,+#_2ff1d85f571b4c90c88d903f14890bf9 | p2@PAGE5 |
| 4.89e-23 | FFCP PHASE1:Hg19::chrX:55246818..55246829,+#_2ff1d85f571b4c90c88d903f14890bf9 | p2@PAGE5 |
| 3.11e-21 | FFCP PHASE2:Hg19::chr5:27742047..27742052,-#_750b580536651862c4b550d01876a709 | p@chr5:27742047..27742052, - |
| 3.11e-21 | FFCP PHASE1:Hg19::chr5:27742047..27742052,-#_750b580536651862c4b550d01876a709 | p@chr5:27742047..27742052, - |
| 3.11e-21 | FFCP PHASE1:Hg19::chr12:127737083..127737103,-#_750b580536651862c4b550d01876a709 | p@chr12:127737083..127737103, - |
| 3.11e-21 | FFCP PHASE2:Hg19::chr12:127737083..127737103,-#_750b580536651862c4b550d01876a709 | p@chr12:127737083..127737103, - |
| 3.11e-21 | FFCP PHASE1:Hg19::chr8:119905427..119905438,-#_750b580536651862c4b550d01876a709 | p@chr8:119905427..119905438, - |
| 3.11e-21 | FFCP PHASE2:Hg19::chr8:119905427..119905438,-#_750b580536651862c4b550d01876a709 | p@chr8:119905427..119905438, - |
| 3.81e-21 | FFCP PHASE2:Hg19::chr19:9811101..9811112,-#_0b51979573f15edf592b0c0e5ff92a47 | p3@ZNF812 |
| 3.81e-21 | FFCP PHASE2:Hg19::chr9:118595109..118595124,+#_0b51979573f15edf592b0c0e5ff92a47 | p@chr9:118595109..118595124, + |
| 3.81e-21 | FFCP PHASE1:Hg19::chr9:118595109..118595124,+#_0b51979573f15edf592b0c0e5ff92a47 | p@chr9:118595109..118595124, + |
| 3.81e-21 | FFCP PHASE2:Hg19::chr5:135378750..135378757,+#_0b51979573f15edf592b0c0e5ff92a47 | p@chr5:135378750..135378757, + |
| 3.81e-21 | FFCP PHASE1:Hg19::chr5:135378750..135378757,+#_0b51979573f15edf592b0c0e5ff92a47 | p@chr5:135378750..135378757, + |
| 3.81e-21 | FFCP PHASE2:Hg19::chr2:145815206..145815208,+#_0b51979573f15edf592b0c0e5ff92a47 | p@chr2:145815206..145815208, + |
| 3.81e-21 | FFCP PHASE1:Hg19::chr2:145815206..145815208,+#_0b51979573f15edf592b0c0e5ff92a47 | p@chr2:145815206..145815208, + |
| 3.81e-21 | FFCP PHASE1:Hg19::chr13:87732242..87732246,-#_0b51979573f15edf592b0c0e5ff92a47 | p@chr13:87732242..87732246, - |
| 3.81e-21 | FFCP PHASE1:Hg19::chr19:9811101..9811112,-#_0b51979573f15edf592b0c0e5ff92a47 | p3@ZNF812 |
| 3.81e-21 | FFCP PHASE2:Hg19::chr13:87732242..87732246,-#_0b51979573f15edf592b0c0e5ff92a47 | p@chr13:87732242..87732246, - |
| 4.66e-21 | FFCP PHASE2:Hg19::chrX:140336680..140336697,-#_6cb1b3b1294637a4dfae3a283113a6fb | p2@SPANXC |
| 4.66e-21 | FFCP PHASE1:Hg19::chrX:140336680..140336697,-#_6cb1b3b1294637a4dfae3a283113a6fb | p2@SPANXC |
| 5.7e-21 | FFCP PHASE1:Hg19::chr2:33171944..33171945,+#_c2d5abe31e307e7978eaf7549d19dbfb | p15@LTBP1 |
| 5.7e-21 | FFCP PHASE2:Hg19::chr5:142000787..142000807,-#_c2d5abe31e307e7978eaf7549d19dbfb | p@chr5:142000787..142000807, - |
| 5.7e-21 | FFCP PHASE1:Hg19::chr5:142000787..142000807,-#_c2d5abe31e307e7978eaf7549d19dbfb | p@chr5:142000787..142000807, - |
| 5.7e-21 | FFCP PHASE2:Hg19::chr2:33171944..33171945,+#_c2d5abe31e307e7978eaf7549d19dbfb | p15@LTBP1 |
| 6.96e-21 | FFCP PHASE2:Hg19::chr3:60761167..60761179,+#_7d29bb6144fa86059a7c4591caf2c2dd | p@chr3:60761167..60761179, + |
| 6.96e-21 | FFCP PHASE1:Hg19::chr3:60761167..60761179,+#_7d29bb6144fa86059a7c4591caf2c2dd | p@chr3:60761167..60761179, + |
| 6.96e-21 | FFCP PHASE1:Hg19::chr8:76774227..76774234,+#_7d29bb6144fa86059a7c4591caf2c2dd | p@chr8:76774227..76774234, + |
| 6.96e-21 | FFCP PHASE1:Hg19::chr18:63273310..63273317,+#_7d29bb6144fa86059a7c4591caf2c2dd | p@chr18:63273310..63273317, + |
| 6.96e-21 | FFCP PHASE2:Hg19::chr8:76774227..76774234,+#_7d29bb6144fa86059a7c4591caf2c2dd | p@chr8:76774227..76774234, + |
| 6.96e-21 | FFCP PHASE1:Hg19::chr11:12061317..12061323,-#_7d29bb6144fa86059a7c4591caf2c2dd | p@chr11:12061317..12061323, - |
| 6.96e-21 | FFCP PHASE1:Hg19::chr11:28792916..28792929,+#_7d29bb6144fa86059a7c4591caf2c2dd | p@chr11:28792916..28792929, + |
| 6.96e-21 | FFCP PHASE2:Hg19::chr11:12061317..12061323,-#_7d29bb6144fa86059a7c4591caf2c2dd | p@chr11:12061317..12061323, - |
| 6.96e-21 | FFCP PHASE2:Hg19::chr5:81611412..81611423,+#_7d29bb6144fa86059a7c4591caf2c2dd | p@chr5:81611412..81611423, + |
| 6.96e-21 | FFCP PHASE2:Hg19::chr18:63273310..63273317,+#_7d29bb6144fa86059a7c4591caf2c2dd | p@chr18:63273310..63273317, + |
| 6.96e-21 | FFCP PHASE1:Hg19::chr5:81611412..81611423,+#_7d29bb6144fa86059a7c4591caf2c2dd | p@chr5:81611412..81611423, + |
| 6.96e-21 | FFCP PHASE2:Hg19::chr11:28792916..28792929,+#_7d29bb6144fa86059a7c4591caf2c2dd | p@chr11:28792916..28792929, + |
