UBERON:0003269: Difference between revisions
From FANTOM5_SSTAR
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|is_obsolete= | |is_obsolete= | ||
|located_in= | |located_in= | ||
|name=skeletal muscle of eye | |name=skeletal muscle tissue of eye | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000019 | |part_of=UBERON:0000019 | ||
Latest revision as of 17:39, 12 September 2014
| Name: | skeletal muscle tissue of eye | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A portion of skeletal muscle tissue that is part of a eye [Obol]." [OBOL:automatic] | ||
| Xrefs: |
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| Synonyms: |
"eye skeletal muscle" EXACT [OBOL:automatic] "eye skeletal muscle group" RELATED [EHDAA2:0000486] "eye skeletal muscle tissue" EXACT [OBOL:automatic] "skeletal muscle tissue of eye" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001134(skeletal muscle tissue),UBERON:0004121(ectoderm-derived structure) |
|---|---|
| part_of: | UBERON:0000019(camera-type eye) |
Children
| part of: | UBERON:0001601 (extra-ocular muscle),UBERON:0006230 (extrinsic ocular pre-muscle mass) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10272-104E2 (eye - muscle inferior rectus, donor1)
- 10300-104H3
- 10328-105B4
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003269 (skeletal muscle tissue of eye), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
