FFCP PHASE1:Mm9::chr17:35137847..35137875,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:35137847..35137875,+
|short_description=p4@Vars
|description=CAGE_peak_4_at_Vars_5end
|association_with_transcript=0bp_to_NM_011690,uc008cey.2,uc008cez.2_...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22321 | |EntrezGene=22321 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q790I0,Q9Z1Q9 | |UniProt=Q790I0,Q9Z1Q9 | ||
|association_with_transcript=0bp_to_NM_011690,uc008cey.2,uc008cez.2_5end | |||
|cluster_id=chr17:35137847..35137875,+ | |||
|description=CAGE_peak_4_at_Vars_5end | |||
|id=chr17:35137847..35137875,+ | |||
|ontology_enrichment_celltype=CL:0000050!7.67e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000050,7.67e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!4.81e-10!128;UBERON:0001555!4.81e-10!128;UBERON:0007026!4.81e-10!128;UBERON:0005057!8.90e-10!51;UBERON:0004921!1.11e-09!126;UBERON:0004185!1.11e-09!126;UBERON:0003929!1.42e-09!55;UBERON:0004119!2.39e-09!130;UBERON:0000925!2.39e-09!130;UBERON:0006595!2.39e-09!130;UBERON:0009854!1.48e-08!23;UBERON:0009856!1.48e-08!23;UBERON:0002405!3.41e-08!70;UBERON:0002107!5.28e-08!22;UBERON:0007499!5.28e-08!22;UBERON:0006925!5.28e-08!22;UBERON:0009497!5.28e-08!22;UBERON:0000015!5.28e-08!22;UBERON:0002423!5.28e-08!22;UBERON:0006235!5.28e-08!22;UBERON:0008835!5.28e-08!22;UBERON:0003894!5.28e-08!22;UBERON:0004161!5.28e-08!22;UBERON:0008836!5.28e-08!22;UBERON:0005409!1.07e-07!59;UBERON:0002365!1.34e-07!25;UBERON:0002330!1.34e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003929,1.35e-09,55;UBERON:0001007,5.23e-09,116;UBERON:0001555,5.23e-09,116;UBERON:0007026,5.23e-09,116;UBERON:0004921,1.15e-08,114;UBERON:0009854,1.48e-08,23;UBERON:0009856,1.48e-08,23;UBERON:0004119,2.49e-08,118;UBERON:0000925,2.49e-08,118;UBERON:0006595,2.49e-08,118;UBERON:0002107,5.28e-08,22;UBERON:0007499,5.28e-08,22;UBERON:0006925,5.28e-08,22;UBERON:0009497,5.28e-08,22;UBERON:0000015,5.28e-08,22;UBERON:0002423,5.28e-08,22;UBERON:0006235,5.28e-08,22;UBERON:0008835,5.28e-08,22;UBERON:0003894,5.28e-08,22;UBERON:0004161,5.28e-08,22;UBERON:0008836,5.28e-08,22;UBERON:0002365,1.34e-07,25;UBERON:0002330,1.34e-07,25;UBERON:0005409,4.41e-07,47 | |||
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| ||
|short_description=p4@Vars | |||
}} | }} |
Latest revision as of 09:07, 26 September 2015
Short description: | p4@Vars |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Vars_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_011690, uc008cey.2, uc008cez.2_5end |
EntrezGene: | Vars |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte-erythroid progenitor cell | 7.67e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gut epithelium | 1.35e-09 | 55 |
digestive system | 5.23e-09 | 116 |
digestive tract | 5.23e-09 | 116 |
primitive gut | 5.23e-09 | 116 |
subdivision of digestive tract | 1.15e-08 | 114 |
digestive tract diverticulum | 1.48e-08 | 23 |
sac | 1.48e-08 | 23 |
endoderm-derived structure | 2.49e-08 | 118 |
endoderm | 2.49e-08 | 118 |
presumptive endoderm | 2.49e-08 | 118 |
liver | 5.28e-08 | 22 |
epithelial sac | 5.28e-08 | 22 |
digestive gland | 5.28e-08 | 22 |
epithelium of foregut-midgut junction | 5.28e-08 | 22 |
anatomical boundary | 5.28e-08 | 22 |
hepatobiliary system | 5.28e-08 | 22 |
foregut-midgut junction | 5.28e-08 | 22 |
hepatic diverticulum | 5.28e-08 | 22 |
liver primordium | 5.28e-08 | 22 |
septum transversum | 5.28e-08 | 22 |
liver bud | 5.28e-08 | 22 |
exocrine gland | 1.34e-07 | 25 |
exocrine system | 1.34e-07 | 25 |
gastrointestinal system | 4.41e-07 | 47 |