FFCP PHASE1:Mm9::chr19:44407892..44407901,+: Difference between revisions
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|id=chr19:44407892..44407901,+
|short_description=p4@Scd4
|description=CAGE_peak_4_at_Scd4_5end
|association_with_transcript=76bp_to_NM_183216,uc008hpq.1_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=329065 | |EntrezGene=329065 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=365 | |||
|TSSclassifier=NA | |||
|UniProt=Q6T707 | |UniProt=Q6T707 | ||
|association_with_transcript=76bp_to_NM_183216,uc008hpq.1_5end | |||
|cluster_id=chr19:44407892..44407901,+ | |||
|description=CAGE_peak_4_at_Scd4_5end | |||
|id=chr19:44407892..44407901,+ | |||
|ontology_enrichment_celltype=CL:0002604!3.52e-07!2;CL:0002605!3.52e-07!2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.43e-25!18;UBERON:0000948!2.43e-25!18;UBERON:0005498!2.43e-25!18;UBERON:0004140!2.43e-25!18;UBERON:0009881!2.43e-25!18;UBERON:0004141!2.43e-25!18;UBERON:0003084!2.43e-25!18;UBERON:0007005!2.43e-25!18;UBERON:0004139!2.43e-25!18;UBERON:0004291!2.43e-25!18;UBERON:0004535!2.62e-19!23;UBERON:0001009!2.62e-19!23;UBERON:0004872!1.00e-12!33;UBERON:0003103!3.29e-09!43;UBERON:0003914!3.18e-08!47;UBERON:0000025!9.51e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.62e-26,18;UBERON:0000948,1.62e-26,18;UBERON:0005498,1.62e-26,18;UBERON:0004140,1.62e-26,18;UBERON:0009881,1.62e-26,18;UBERON:0004141,1.62e-26,18;UBERON:0003084,1.62e-26,18;UBERON:0007005,1.62e-26,18;UBERON:0004139,1.62e-26,18;UBERON:0004291,1.62e-26,18;UBERON:0004535,9.42e-21,23;UBERON:0001009,9.42e-21,23;UBERON:0004872,1.92e-14,33;UBERON:0003103,4.74e-11,43;UBERON:0000305,8.99e-11,1;UBERON:0003914,4.29e-10,47;UBERON:0003081,6.32e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,0.219686182734472,0.388859798148567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0.393528463494808,0.617068451549513,0.697601834251224,0.536546802799238,2.21854150497622,4.93679549740441,7.38753588355929,2.43206428637567,2.19299981137998,1.09775057645525,2.95254121272818,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.478364305972461,0,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,0.219686182734472,0.388859798148567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0.393528463494808,0.617068451549513,0.697601834251224,0.536546802799238,2.21854150497622,4.93679549740441,7.38753588355929,2.43206428637567,2.19299981137998,1.09775057645525,2.95254121272818,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.478364305972461,0,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@Scd4 | |||
}} | }} |
Latest revision as of 19:57, 25 September 2015
Short description: | p4@Scd4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Scd4_5end |
Coexpression cluster: | MCL_coexpression_mm9:365 |
Association with transcript: | 76bp_to_NM_183216, uc008hpq.1_5end |
EntrezGene: | Scd4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.62e-26 | 18 |
heart | 1.62e-26 | 18 |
primitive heart tube | 1.62e-26 | 18 |
primary heart field | 1.62e-26 | 18 |
anterior lateral plate mesoderm | 1.62e-26 | 18 |
heart tube | 1.62e-26 | 18 |
heart primordium | 1.62e-26 | 18 |
cardiac mesoderm | 1.62e-26 | 18 |
cardiogenic plate | 1.62e-26 | 18 |
heart rudiment | 1.62e-26 | 18 |
cardiovascular system | 9.42e-21 | 23 |
circulatory system | 9.42e-21 | 23 |
splanchnic layer of lateral plate mesoderm | 1.92e-14 | 33 |
compound organ | 4.74e-11 | 43 |
amnion | 8.99e-11 | 1 |
epithelial tube | 4.29e-10 | 47 |
lateral plate mesoderm | 6.32e-07 | 87 |