FFCP PHASE2:Hg19::chr1:209825762..209825779,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3914 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6490 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3914 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6490 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q13751 | ||
|association_with_transcript=31bp_to_ENST00000356082_5end | |association_with_transcript=31bp_to_ENST00000356082_5end | ||
|cluster_id=chr1:209825762..209825779,- | |cluster_id=chr1:209825762..209825779,- |
Latest revision as of 19:43, 24 September 2015
Short description: | p1@LAMB3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LAMB3_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 31bp_to_ENST00000356082_5end |
EntrezGene: | LAMB3 |
HGNC: | 6490 |
UniProt: | Q13751 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@LAMB3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.64e-41 | 253 |
endo-epithelial cell | 2.32e-35 | 42 |
endodermal cell | 9.52e-23 | 58 |
epithelial cell of alimentary canal | 9.39e-16 | 20 |
respiratory epithelial cell | 2.52e-15 | 13 |
epithelial cell of tracheobronchial tree | 9.29e-11 | 9 |
epithelial cell of lower respiratory tract | 9.29e-11 | 9 |
general ecto-epithelial cell | 2.58e-08 | 14 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 8.30e-36 | 160 |
endoderm | 8.30e-36 | 160 |
presumptive endoderm | 8.30e-36 | 160 |
digestive system | 3.55e-26 | 145 |
digestive tract | 3.55e-26 | 145 |
primitive gut | 3.55e-26 | 145 |
subdivision of digestive tract | 2.29e-24 | 118 |
respiratory system | 7.35e-24 | 74 |
respiratory tract | 2.76e-19 | 54 |
foregut | 9.75e-16 | 87 |
Showing 1 to 10 of 51 entries
Ontology term | p-value | n |
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carcinoma | 1.32e-23 | 106 |
cell type cancer | 6.23e-15 | 143 |
squamous cell carcinoma | 9.62e-13 | 14 |
adenocarcinoma | 1.85e-09 | 25 |
Showing 1 to 4 of 4 entries