FFCP PHASE2:Hg19::chr1:35220613..35220718,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2709 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:4287 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2709 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4287 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O95377 | ||
|association_with_transcript=0bp_to_ENST00000338513_5end | |association_with_transcript=0bp_to_ENST00000338513_5end | ||
|cluster_id=chr1:35220613..35220718,+ | |cluster_id=chr1:35220613..35220718,+ |
Latest revision as of 17:46, 17 September 2015
Short description: | p1@GJB5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GJB5_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 0bp_to_ENST00000338513_5end |
EntrezGene: | GJB5 |
HGNC: | 4287 |
UniProt: | O95377 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@GJB5 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell | 1.28e-33 | 253 |
endo-epithelial cell | 8.95e-24 | 42 |
endodermal cell | 4.37e-18 | 58 |
epithelial cell of alimentary canal | 1.50e-13 | 20 |
respiratory epithelial cell | 2.32e-12 | 13 |
general ecto-epithelial cell | 3.28e-12 | 14 |
squamous epithelial cell | 4.54e-09 | 63 |
acinar cell | 7.55e-08 | 5 |
epithelial cell of tracheobronchial tree | 7.83e-08 | 9 |
epithelial cell of lower respiratory tract | 7.83e-08 | 9 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
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endoderm-derived structure | 8.35e-23 | 160 |
endoderm | 8.35e-23 | 160 |
presumptive endoderm | 8.35e-23 | 160 |
respiratory system | 2.35e-22 | 74 |
respiratory tract | 8.40e-16 | 54 |
digestive system | 9.67e-15 | 145 |
digestive tract | 9.67e-15 | 145 |
primitive gut | 9.67e-15 | 145 |
orifice | 4.54e-14 | 36 |
extraembryonic membrane | 8.59e-14 | 14 |
Showing 1 to 10 of 38 entries
Ontology term | p-value | n |
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carcinoma | 1.59e-16 | 106 |
squamous cell carcinoma | 4.32e-15 | 14 |
cell type cancer | 8.32e-09 | 143 |
Showing 1 to 3 of 3 entries