FFCP PHASE1:Mm9::chr1:168060648..168060659,+: Difference between revisions
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|id=chr1:168060648..168060659,+
|short_description=p4@Gpa33
|description=CAGE_peak_4_at_Gpa33_5end
|association_with_transcript=50bp_to_ENSMUST00000166860_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=59290 | |EntrezGene=59290 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=195 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JKA5 | |UniProt=Q9JKA5 | ||
|association_with_transcript=50bp_to_ENSMUST00000166860_5end | |||
|cluster_id=chr1:168060648..168060659,+ | |||
|description=CAGE_peak_4_at_Gpa33_5end | |||
|id=chr1:168060648..168060659,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.34e-13!9;CL:0002251!7.34e-13!9;CL:0000239!1.23e-09!6;CL:0000677!1.23e-09!6;CL:0000212!1.23e-09!6;CL:0000584!1.23e-09!6;CL:0000075!4.10e-08!7;CL:0002076!6.62e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.03e-15,9;CL:0002251,1.03e-15,9;CL:0000239,2.82e-14,6;CL:0000677,2.82e-14,6;CL:0000584,2.82e-14,6;CL:0000075,3.84e-12,7;CL:0000066,1.11e-09,25;CL:0002076,6.46e-09,15;CL:0000682,1.39e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.74e-25!59;UBERON:0000160!1.22e-24!43;UBERON:0000344!3.83e-22!15;UBERON:0001242!4.70e-19!13;UBERON:0000060!4.70e-19!13;UBERON:0001262!4.70e-19!13;UBERON:0004786!4.70e-19!13;UBERON:0003350!7.34e-13!9;UBERON:0004808!7.34e-13!9;UBERON:0001277!7.34e-13!9;UBERON:0004923!3.50e-12!24;UBERON:0001007!1.02e-10!128;UBERON:0001555!1.02e-10!128;UBERON:0007026!1.02e-10!128;UBERON:0004119!2.19e-10!130;UBERON:0000925!2.19e-10!130;UBERON:0006595!2.19e-10!130;UBERON:0000485!3.83e-10!11;UBERON:0004921!2.79e-09!126;UBERON:0004185!2.79e-09!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.09e-41,47;UBERON:0000160,4.52e-41,31;UBERON:0000344,4.29e-30,15;UBERON:0001242,2.80e-25,13;UBERON:0001262,2.80e-25,13;UBERON:0004786,2.80e-25,13;UBERON:0004923,1.34e-17,24;UBERON:0001007,7.19e-17,116;UBERON:0001555,7.19e-17,116;UBERON:0007026,7.19e-17,116;UBERON:0004119,1.82e-16,118;UBERON:0000925,1.82e-16,118;UBERON:0006595,1.82e-16,118;UBERON:0003350,1.03e-15,9;UBERON:0004808,1.03e-15,9;UBERON:0001277,1.03e-15,9;UBERON:0004921,1.69e-14,114;UBERON:0000485,1.27e-12,11;UBERON:0002108,7.03e-11,4;UBERON:0000331,1.04e-08,3;UBERON:0002116,1.04e-08,3;UBERON:0001204,1.04e-08,3;UBERON:0001168,1.04e-08,3 | |||
|phase1_expression=0,11.8651638597383,13.1949779422965,7.86406949397758,6.51164448930251,4.02910252588535,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,14.3993180514066,12.8469197397615,13.7815671387605,9.47676391549965,13.3592164265251,15.771943814879,7.05684363327806,15.5211357458713,0,0,0,0.288851619751275,1.66234645358492,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,33.550517019262,0,0,10.4737392635522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.5977920517641,6.61126416658861,0,0,0,0.403367049246685,0.889512175379481,0.570676878337677,12.3377556001573,1.4822905925161,2.26201687920243,1.98956472041151,4.09424582950152,7.19055526923377,11.0230405436094,15.732160587095,0,0,0,0.203651327845314,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0.328281799490123,8.16146342563582,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0,0,0,0,1.09181281873089,2.02296519577231,3.2234847732881,4.71160695571253,58.7155829011822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,14.6824091464465,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0,0,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0,11.8651638597383,13.1949779422965,7.86406949397758,6.51164448930251,4.02910252588535,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,14.3993180514066,12.8469197397615,13.7815671387605,9.47676391549965,13.3592164265251,15.771943814879,7.05684363327806,15.5211357458713,0,0,0,0.288851619751275,1.66234645358492,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,33.550517019262,0,0,10.4737392635522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.5977920517641,6.61126416658861,0,0,0,0.403367049246685,0.889512175379481,0.570676878337677,12.3377556001573,1.4822905925161,2.26201687920243,1.98956472041151,4.09424582950152,7.19055526923377,11.0230405436094,15.732160587095,0,0,0,0.203651327845314,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0.328281799490123,8.16146342563582,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0,0,0,0,1.09181281873089,2.02296519577231,3.2234847732881,4.71160695571253,58.7155829011822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,14.6824091464465,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0,0,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p4@Gpa33 | |||
}} | }} |
Latest revision as of 17:36, 26 September 2015
Short description: | p4@Gpa33 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gpa33_5end |
Coexpression cluster: | MCL_coexpression_mm9:195 |
Association with transcript: | 50bp_to_ENSMUST00000166860_5end |
EntrezGene: | Gpa33 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.03e-15 | 9 |
epithelial cell of alimentary canal | 1.03e-15 | 9 |
brush border epithelial cell | 2.82e-14 | 6 |
gut absorptive cell | 2.82e-14 | 6 |
enterocyte | 2.82e-14 | 6 |
columnar/cuboidal epithelial cell | 3.84e-12 | 7 |
epithelial cell | 1.11e-09 | 25 |
endo-epithelial cell | 6.46e-09 | 15 |
M cell of gut | 1.39e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.09e-41 | 47 |
intestine | 4.52e-41 | 31 |
mucosa | 4.29e-30 | 15 |
intestinal mucosa | 2.80e-25 | 13 |
wall of intestine | 2.80e-25 | 13 |
gastrointestinal system mucosa | 2.80e-25 | 13 |
organ component layer | 1.34e-17 | 24 |
digestive system | 7.19e-17 | 116 |
digestive tract | 7.19e-17 | 116 |
primitive gut | 7.19e-17 | 116 |
endoderm-derived structure | 1.82e-16 | 118 |
endoderm | 1.82e-16 | 118 |
presumptive endoderm | 1.82e-16 | 118 |
epithelium of mucosa | 1.03e-15 | 9 |
gastrointestinal system epithelium | 1.03e-15 | 9 |
intestinal epithelium | 1.03e-15 | 9 |
subdivision of digestive tract | 1.69e-14 | 114 |
simple columnar epithelium | 1.27e-12 | 11 |
small intestine | 7.03e-11 | 4 |
ileal mucosa | 1.04e-08 | 3 |
ileum | 1.04e-08 | 3 |
mucosa of small intestine | 1.04e-08 | 3 |
wall of small intestine | 1.04e-08 | 3 |