FFCP PHASE2:Hg19::chr2:128400774..128400781,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:55679 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:16084 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=55679 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=16084 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q7Z4I2 | ||
|association_with_transcript=21bp_to_ENST00000409286_5end | |association_with_transcript=21bp_to_ENST00000409286_5end | ||
|cluster_id=chr2:128400774..128400781,- | |cluster_id=chr2:128400774..128400781,- |
Latest revision as of 20:59, 16 September 2015
Short description: | p51@LIMS2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_51_at_LIMS2_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 21bp_to_ENST00000409286_5end |
EntrezGene: | LIMS2 |
HGNC: | 16084 |
UniProt: | Q7Z4I2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p51@LIMS2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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melanocyte | 5.79e-79 | 10 |
melanoblast | 5.79e-79 | 10 |
pigment cell | 9.13e-57 | 14 |
dark melanocyte | 2.42e-50 | 1 |
neurecto-epithelial cell | 4.28e-40 | 20 |
columnar/cuboidal epithelial cell | 5.44e-30 | 27 |
ecto-epithelial cell | 4.91e-24 | 34 |
migratory neural crest cell | 3.24e-19 | 41 |
light melanocyte | 6.76e-18 | 3 |
neurectodermal cell | 7.99e-14 | 59 |
Showing 1 to 10 of 12 entries