FFCP PHASE1:Mm9::chr2:13415287..13415297,-: Difference between revisions
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|id=chr2:13415287..13415297,-
|short_description=p@chr2:13415287..13415297,-
|description=CAGE_peak_at_chr2:13415287..13415297,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:13415287..13415297,- | |||
|description=CAGE_peak_at_chr2:13415287..13415297,- | |||
|id=chr2:13415287..13415297,- | |||
|ontology_enrichment_celltype=CL:0000239!7.54e-23!6;CL:0000677!7.54e-23!6;CL:0000212!7.54e-23!6;CL:0000584!7.54e-23!6;CL:0000075!1.62e-19!7;CL:0002563!4.59e-15!9;CL:0002251!4.59e-15!9;CL:0000473!9.65e-13!3;CL:0000627!9.65e-13!3;CL:0000682!9.65e-13!3;CL:0000066!2.41e-11!25;CL:0002076!8.17e-09!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,5.59e-23,3;CL:0000239,4.73e-20,6;CL:0000677,4.73e-20,6;CL:0000584,4.73e-20,6;CL:0000075,3.05e-17,7;CL:0000066,3.71e-14,25;CL:0002563,1.73e-13,9;CL:0002251,1.73e-13,9;CL:0000473,3.25e-10,7;CL:0002076,3.35e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.47e-35!15;UBERON:0001242!9.28e-28!13;UBERON:0000060!9.28e-28!13;UBERON:0001262!9.28e-28!13;UBERON:0004786!9.28e-28!13;UBERON:0004923!1.20e-24!24;UBERON:0000160!6.63e-17!43;UBERON:0003350!4.59e-15!9;UBERON:0004808!4.59e-15!9;UBERON:0001277!4.59e-15!9;UBERON:0000485!3.16e-12!11;UBERON:0000331!6.01e-12!3;UBERON:0002116!6.01e-12!3;UBERON:0001204!6.01e-12!3;UBERON:0001168!6.01e-12!3;UBERON:0005409!1.45e-11!59;UBERON:0001962!3.67e-09!2;UBERON:0001961!3.67e-09!2;UBERON:0001744!3.67e-09!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.17e-30,15;UBERON:0001242,6.59e-20,13;UBERON:0001262,6.59e-20,13;UBERON:0004786,6.59e-20,13;UBERON:0004923,5.45e-19,24;UBERON:0001962,4.09e-16,2;UBERON:0001961,4.09e-16,2;UBERON:0001744,4.09e-16,2;UBERON:0003350,1.73e-13,9;UBERON:0004808,1.73e-13,9;UBERON:0001277,1.73e-13,9;UBERON:0000485,4.32e-11,11;UBERON:0002465,4.61e-11,3;UBERON:0000160,4.79e-11,31;UBERON:0000331,2.75e-10,3;UBERON:0002116,2.75e-10,3;UBERON:0001204,2.75e-10,3;UBERON:0001168,2.75e-10,3;UBERON:0003199,6.23e-09,1;UBERON:0002108,6.11e-08,4;UBERON:0005409,4.00e-07,47 | |||
|phase1_expression=0,7.67745896806594,10.4649825059593,0.30246421130683,0.500895729946347,2.51818907867835,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,8.47959840805055,8.94696196161963,9.76194338995534,5.1691439539089,6.03319451520489,1.71021077510736,1.00812051903972,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,1.79763881730844,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,7.67745896806594,10.4649825059593,0.30246421130683,0.500895729946347,2.51818907867835,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,8.47959840805055,8.94696196161963,9.76194338995534,5.1691439539089,6.03319451520489,1.71021077510736,1.00812051903972,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,1.79763881730844,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:13415287..13415297,- | |||
}} | }} |
Latest revision as of 03:03, 4 August 2015
Short description: | p@chr2:13415287..13415297, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:13415287..13415297, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 5.59e-23 | 3 |
brush border epithelial cell | 4.73e-20 | 6 |
gut absorptive cell | 4.73e-20 | 6 |
enterocyte | 4.73e-20 | 6 |
columnar/cuboidal epithelial cell | 3.05e-17 | 7 |
epithelial cell | 3.71e-14 | 25 |
intestinal epithelial cell | 1.73e-13 | 9 |
epithelial cell of alimentary canal | 1.73e-13 | 9 |
defensive cell | 3.25e-10 | 7 |
endo-epithelial cell | 3.35e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.17e-30 | 15 |
intestinal mucosa | 6.59e-20 | 13 |
wall of intestine | 6.59e-20 | 13 |
gastrointestinal system mucosa | 6.59e-20 | 13 |
organ component layer | 5.45e-19 | 24 |
gut-associated lymphoid tissue | 4.09e-16 | 2 |
mucosa-associated lymphoid tissue | 4.09e-16 | 2 |
lymphoid tissue | 4.09e-16 | 2 |
epithelium of mucosa | 1.73e-13 | 9 |
gastrointestinal system epithelium | 1.73e-13 | 9 |
intestinal epithelium | 1.73e-13 | 9 |
simple columnar epithelium | 4.32e-11 | 11 |
lymphoid system | 4.61e-11 | 3 |
intestine | 4.79e-11 | 31 |
ileal mucosa | 2.75e-10 | 3 |
ileum | 2.75e-10 | 3 |
mucosa of small intestine | 2.75e-10 | 3 |
wall of small intestine | 2.75e-10 | 3 |
egg chamber | 6.23e-09 | 1 |
small intestine | 6.11e-08 | 4 |
gastrointestinal system | 4.00e-07 | 47 |