FFCP PHASE1:Mm9::chr2:157327065..157327072,-: Difference between revisions
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|id=chr2:157327065..157327072,-
|short_description=p@chr2:157327065..157327072,-
|description=CAGE_peak_at_chr2:157327065..157327072,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:157327065..157327072,- | |||
|description=CAGE_peak_at_chr2:157327065..157327072,- | |||
|id=chr2:157327065..157327072,- | |||
|ontology_enrichment_celltype=CL:0000239!1.63e-12!6;CL:0000677!1.63e-12!6;CL:0000212!1.63e-12!6;CL:0000584!1.63e-12!6;CL:0002563!3.03e-11!9;CL:0002251!3.03e-11!9;CL:0000075!1.13e-10!7;CL:0000066!5.07e-10!25;CL:0000473!1.05e-09!3;CL:0000627!1.05e-09!3;CL:0000682!1.05e-09!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.04e-18,3;CL:0000239,9.17e-17,6;CL:0000677,9.17e-17,6;CL:0000584,9.17e-17,6;CL:0000066,1.04e-14,25;CL:0000075,2.09e-14,7;CL:0002563,2.96e-11,9;CL:0002251,2.96e-11,9;CL:0000473,3.24e-08,7;CL:0000223,1.36e-07,20;CL:0002076,8.13e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.05e-26!15;UBERON:0001242!6.44e-21!13;UBERON:0000060!6.44e-21!13;UBERON:0001262!6.44e-21!13;UBERON:0004786!6.44e-21!13;UBERON:0004923!3.06e-15!24;UBERON:0000160!1.23e-13!43;UBERON:0003350!3.03e-11!9;UBERON:0004808!3.03e-11!9;UBERON:0001277!3.03e-11!9;UBERON:0000331!1.46e-09!3;UBERON:0002116!1.46e-09!3;UBERON:0001204!1.46e-09!3;UBERON:0001168!1.46e-09!3;UBERON:0000485!4.53e-09!11;UBERON:0005409!5.56e-09!59;UBERON:0001962!8.68e-07!2;UBERON:0001961!8.68e-07!2;UBERON:0001744!8.68e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.59e-31,15;UBERON:0001242,2.56e-22,13;UBERON:0001262,2.56e-22,13;UBERON:0004786,2.56e-22,13;UBERON:0004923,3.11e-19,24;UBERON:0000160,1.43e-14,31;UBERON:0001962,2.15e-12,2;UBERON:0001961,2.15e-12,2;UBERON:0001744,2.15e-12,2;UBERON:0003350,2.96e-11,9;UBERON:0004808,2.96e-11,9;UBERON:0001277,2.96e-11,9;UBERON:0005409,2.92e-09,47;UBERON:0000485,3.04e-09,11;UBERON:0000331,4.51e-09,3;UBERON:0002116,4.51e-09,3;UBERON:0001204,4.51e-09,3;UBERON:0001168,4.51e-09,3;UBERON:0002465,1.45e-08,3;UBERON:0003199,4.83e-07,1;UBERON:0002108,5.19e-07,4 | |||
|phase1_expression=0,12.563114675017,6.3699893514535,6.65421264875026,12.5223932486587,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71987118748791,3.21172993494038,4.59385571292016,7.32295393470427,4.52489588640367,8.93110071444957,5.54466285471848,0.886922042621219,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0.0755715601067855,0,0,4.75979933595425,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,2.3800550999719,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0.898819408654221,0.648414149624083,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0.214337035031592,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,12.563114675017,6.3699893514535,6.65421264875026,12.5223932486587,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71987118748791,3.21172993494038,4.59385571292016,7.32295393470427,4.52489588640367,8.93110071444957,5.54466285471848,0.886922042621219,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0.0755715601067855,0,0,4.75979933595425,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,2.3800550999719,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0.898819408654221,0.648414149624083,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0.214337035031592,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:157327065..157327072,- | |||
}} | }} |
Latest revision as of 09:53, 4 August 2015
Short description: | p@chr2:157327065..157327072, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:157327065..157327072, - |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.04e-18 | 3 |
brush border epithelial cell | 9.17e-17 | 6 |
gut absorptive cell | 9.17e-17 | 6 |
enterocyte | 9.17e-17 | 6 |
epithelial cell | 1.04e-14 | 25 |
columnar/cuboidal epithelial cell | 2.09e-14 | 7 |
intestinal epithelial cell | 2.96e-11 | 9 |
epithelial cell of alimentary canal | 2.96e-11 | 9 |
defensive cell | 3.24e-08 | 7 |
endodermal cell | 1.36e-07 | 20 |
endo-epithelial cell | 8.13e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.59e-31 | 15 |
intestinal mucosa | 2.56e-22 | 13 |
wall of intestine | 2.56e-22 | 13 |
gastrointestinal system mucosa | 2.56e-22 | 13 |
organ component layer | 3.11e-19 | 24 |
intestine | 1.43e-14 | 31 |
gut-associated lymphoid tissue | 2.15e-12 | 2 |
mucosa-associated lymphoid tissue | 2.15e-12 | 2 |
lymphoid tissue | 2.15e-12 | 2 |
epithelium of mucosa | 2.96e-11 | 9 |
gastrointestinal system epithelium | 2.96e-11 | 9 |
intestinal epithelium | 2.96e-11 | 9 |
gastrointestinal system | 2.92e-09 | 47 |
simple columnar epithelium | 3.04e-09 | 11 |
ileal mucosa | 4.51e-09 | 3 |
ileum | 4.51e-09 | 3 |
mucosa of small intestine | 4.51e-09 | 3 |
wall of small intestine | 4.51e-09 | 3 |
lymphoid system | 1.45e-08 | 3 |
egg chamber | 4.83e-07 | 1 |
small intestine | 5.19e-07 | 4 |