FFCP PHASE1:Mm9::chr2:54288843..54288852,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:54288843..54288852,+
|short_description=p3@Galnt13
|description=CAGE_peak_3_at_Galnt13_5end
|association_with_transcript=45bp_to_ENSMUST00000112634,ENSMUST...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=271786 | |EntrezGene=271786 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8CF93,A2RRI8,B1AY78 | |UniProt=Q8CF93,A2RRI8,B1AY78 | ||
|association_with_transcript=45bp_to_ENSMUST00000112634,ENSMUST00000112635,NM_173030,uc008jrq.1,uc008jrr.1,uc012bvm.1_5end | |||
|cluster_id=chr2:54288843..54288852,+ | |||
|description=CAGE_peak_3_at_Galnt13_5end | |||
|id=chr2:54288843..54288852,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.90e-10!23;CL:0000337!4.90e-10!23;CL:0000393!1.70e-07!39;CL:0000211!1.70e-07!39;CL:0000540!9.97e-07!33;CL:0000047!9.97e-07!33;CL:0000031!9.97e-07!33;CL:0000404!9.97e-07!33 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.84e-20!63;UBERON:0002346!4.18e-18!71;UBERON:0003075!4.18e-18!71;UBERON:0007284!4.18e-18!71;UBERON:0003056!4.23e-16!49;UBERON:0004121!1.90e-15!102;UBERON:0000924!1.90e-15!102;UBERON:0006601!1.90e-15!102;UBERON:0001049!2.75e-14!52;UBERON:0005068!2.75e-14!52;UBERON:0006241!2.75e-14!52;UBERON:0007135!2.75e-14!52;UBERON:0001017!2.06e-13!73;UBERON:0005743!2.06e-13!73;UBERON:0007811!5.54e-13!86;UBERON:0000073!9.06e-13!75;UBERON:0001016!9.06e-13!75;UBERON:0000020!2.56e-12!12;UBERON:0001032!2.56e-12!12;UBERON:0004456!2.56e-12!12;UBERON:0002616!6.61e-12!49;UBERON:0000970!7.62e-12!9;UBERON:0000019!7.62e-12!9;UBERON:0000047!7.62e-12!9;UBERON:0004088!7.62e-12!9;UBERON:0002104!7.62e-12!9;UBERON:0001456!7.62e-12!9;UBERON:0003072!7.62e-12!9;UBERON:0003071!7.62e-12!9;UBERON:0004128!7.62e-12!9;UBERON:0000955!1.65e-11!50;UBERON:0006238!1.65e-11!50;UBERON:0005085!4.04e-11!13;UBERON:0000153!6.60e-11!94;UBERON:0001444!3.09e-09!11;UBERON:0003080!2.50e-08!40;UBERON:0003076!8.89e-08!12;UBERON:0003057!8.89e-08!12;UBERON:0002780!1.43e-07!39;UBERON:0001890!1.43e-07!39;UBERON:0006240!1.43e-07!39;UBERON:0002298!1.95e-07!6;UBERON:0002020!9.75e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,9.45e-18,9;UBERON:0000019,9.45e-18,9;UBERON:0000047,9.45e-18,9;UBERON:0010312,9.45e-18,9;UBERON:0004088,9.45e-18,9;UBERON:0002104,9.45e-18,9;UBERON:0001456,9.45e-18,9;UBERON:0003072,9.45e-18,9;UBERON:0004128,9.45e-18,9;UBERON:0003071,9.45e-18,9;UBERON:0001444,1.58e-14,11;UBERON:0000020,2.58e-13,12;UBERON:0001032,2.58e-13,12;UBERON:0004456,2.58e-13,12;UBERON:0000033,2.74e-12,13;UBERON:0005085,2.74e-12,13;UBERON:0002037,1.24e-07,4;UBERON:0002680,1.24e-07,4;UBERON:0001895,1.24e-07,4;UBERON:0010092,1.24e-07,4;UBERON:0006215,1.24e-07,4;UBERON:0002346,3.84e-07,64;UBERON:0003075,3.84e-07,64;UBERON:0007284,3.84e-07,64 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,1.28482726513177,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,0.571301968807607,0,0,0.0958454710182364,0,0,0.638436690425939,0.614426133024974,0.395658863190582,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.916789486660861,1.17851434189467,0.569486723196412,0.559198337475902,0,0,0,0,0,0,0,0,0,1.70430322578058,1.03914401841148,1.41335829804136,0.281686839553361,5.13305909657271,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.73395833126558,9.00620839297857,0,0,0,0,0.898743836428936,1.37250180845588,0.125654352112864,0.173824320192276,0,0.20778804455956,0.648965052271031,0,0,0.252722758433675,0.210441855886474,0.260240885925407,0.919608417733892,0.720248519221397,1.80845781402858,4.35433594568498,4.99643509110914,5.15359485078509,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.35163505977661,0.491804836130026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0.857348140126369,0.177340233642274,0,0.493647061806363,0,0,0,0,0,0,0,0,0,0.291480836629851,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0,0,0,0.187682475451182,0,0,0,0.564751842617067,0,0,0,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.384150914429216,0.114870937911227,0.476293691283074,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0.561142271657738,0.237270036248348,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0.220591419119515,0 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,1.28482726513177,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,0.571301968807607,0,0,0.0958454710182364,0,0,0.638436690425939,0.614426133024974,0.395658863190582,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.916789486660861,1.17851434189467,0.569486723196412,0.559198337475902,0,0,0,0,0,0,0,0,0,1.70430322578058,1.03914401841148,1.41335829804136,0.281686839553361,5.13305909657271,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.73395833126558,9.00620839297857,0,0,0,0,0.898743836428936,1.37250180845588,0.125654352112864,0.173824320192276,0,0.20778804455956,0.648965052271031,0,0,0.252722758433675,0.210441855886474,0.260240885925407,0.919608417733892,0.720248519221397,1.80845781402858,4.35433594568498,4.99643509110914,5.15359485078509,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.35163505977661,0.491804836130026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0.857348140126369,0.177340233642274,0,0.493647061806363,0,0,0,0,0,0,0,0,0,0.291480836629851,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0,0,0,0.187682475451182,0,0,0,0.564751842617067,0,0,0,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.384150914429216,0.114870937911227,0.476293691283074,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0.561142271657738,0.237270036248348,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0.220591419119515,0 | ||
|short_description=p3@Galnt13 | |||
}} | }} |
Latest revision as of 18:48, 26 September 2015
Short description: | p3@Galnt13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Galnt13_5end |
Coexpression cluster: | NA |
Association with transcript: | 45bp_to_ENSMUST00000112634, ENSMUST00000112635, NM_173030, uc008jrq.1, uc008jrr.1, uc012bvm.1_5end |
EntrezGene: | Galnt13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 9.45e-18 | 9 |
camera-type eye | 9.45e-18 | 9 |
simple eye | 9.45e-18 | 9 |
immature eye | 9.45e-18 | 9 |
ocular region | 9.45e-18 | 9 |
visual system | 9.45e-18 | 9 |
face | 9.45e-18 | 9 |
optic cup | 9.45e-18 | 9 |
optic vesicle | 9.45e-18 | 9 |
eye primordium | 9.45e-18 | 9 |
subdivision of head | 1.58e-14 | 11 |
sense organ | 2.58e-13 | 12 |
sensory system | 2.58e-13 | 12 |
entire sense organ system | 2.58e-13 | 12 |
head | 2.74e-12 | 13 |
ectodermal placode | 2.74e-12 | 13 |
cerebellum | 1.24e-07 | 4 |
regional part of metencephalon | 1.24e-07 | 4 |
metencephalon | 1.24e-07 | 4 |
future metencephalon | 1.24e-07 | 4 |
rhombic lip | 1.24e-07 | 4 |
neurectoderm | 3.84e-07 | 64 |
neural plate | 3.84e-07 | 64 |
presumptive neural plate | 3.84e-07 | 64 |