FFCP PHASE1:Mm9::chr2:80421152..80421177,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:80421152..80421177,-
|short_description=p4@Nckap1
|description=CAGE_peak_4_at_Nckap1_5end
|association_with_transcript=-30bp_to_NM_016965,uc008khm.1,uc008k...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=50884 | |EntrezGene=50884 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1610 | |||
|TSSclassifier=NA | |||
|UniProt=A2AS97,P28660,A2AS98 | |UniProt=A2AS97,P28660,A2AS98 | ||
|association_with_transcript=-30bp_to_NM_016965,uc008khm.1,uc008khn.1,uc012byb.1_5end | |||
|cluster_id=chr2:80421152..80421177,- | |||
|description=CAGE_peak_4_at_Nckap1_5end | |||
|id=chr2:80421152..80421177,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!4.89e-08!10;UBERON:0000411!4.89e-08!10;UBERON:0001950!4.89e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.48e-08,10;UBERON:0000411,4.48e-08,10;UBERON:0001950,4.48e-08,10;UBERON:0004121,6.05e-07,95;UBERON:0000924,6.05e-07,95;UBERON:0006601,6.05e-07,95 | |||
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| ||
|short_description=p4@Nckap1 | |||
}} | }} |
Latest revision as of 01:16, 27 September 2015
Short description: | p4@Nckap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Nckap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1610 |
Association with transcript: | -30bp_to_NM_016965, uc008khm.1, uc008khn.1, uc012byb.1_5end |
EntrezGene: | Nckap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.48e-08 | 10 |
visual cortex | 4.48e-08 | 10 |
neocortex | 4.48e-08 | 10 |
ectoderm-derived structure | 6.05e-07 | 95 |
ectoderm | 6.05e-07 | 95 |
presumptive ectoderm | 6.05e-07 | 95 |