Personal tools

FFCP PHASE1:Mm9::chr3:113733450..113733489,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr3:113733450..113733489,+ |short_description=p2@Col11a1 |description=CAGE_peak_2_at_Col11a1_5end |association_with_transcript=0bp_to_ENSMUST00000029583,ENSMUS...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr3:113733450..113733489,+
|DHSsupport=NA
|short_description=p2@Col11a1
|DPIdataset=NA
|description=CAGE_peak_2_at_Col11a1_5end
|association_with_transcript=0bp_to_ENSMUST00000029583,ENSMUST00000029585,ENSMUST00000029586,ENSMUST00000092155,ENSMUST00000123619,NM_007729,uc008rbj.1,uc008rbk.1_5end
|EntrezGene=12814
|EntrezGene=12814
|HGNC=
|HGNC=
|MCL_coexpression_id=1194
|TSSclassifier=NA
|UniProt=E9Q736,E9Q734,E9Q733,Q61245,E9PVT8,Q3UST0,Q8C4S5
|UniProt=E9Q736,E9Q734,E9Q733,Q61245,E9PVT8,Q3UST0,Q8C4S5
|association_with_transcript=0bp_to_ENSMUST00000029583,ENSMUST00000029585,ENSMUST00000029586,ENSMUST00000092155,ENSMUST00000123619,NM_007729,uc008rbj.1,uc008rbk.1_5end
|cluster_id=chr3:113733450..113733489,+
|description=CAGE_peak_2_at_Col11a1_5end
|id=chr3:113733450..113733489,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!3.10e-10!333;UBERON:0004121!1.85e-07!102;UBERON:0000924!1.85e-07!102;UBERON:0006601!1.85e-07!102
|ontology_enrichment_uberon_v019_2=UBERON:0000026,3.72e-07,12;UBERON:0004708,3.72e-07,12;UBERON:0002101,3.72e-07,12;UBERON:0004357,3.72e-07,12;UBERON:0004347,3.72e-07,12;UBERON:0005732,3.72e-07,12;UBERON:0005733,3.72e-07,12;UBERON:0004121,4.02e-07,95;UBERON:0000924,4.02e-07,95;UBERON:0006601,4.02e-07,95
|phase1_expression=45.1619748835519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.3091899863881,4.56196190487815,6.79122982998222,3.12956537739216,17.6600376668162,8.12838876117546,18.6652703111312,10.0790223570261,14.3752564364972,0,0,0,87.7254676882579,73.3525606243217,68.0687161806224,6.27181028664753,5.81890077199236,3.80298842103708,3.72728985276045,5.33576877666684,0,0,0,6.5912024314049,13.831858991576,8.39885859698669,7.2903206699113,6.73039876324422,5.71301968807607,7.95126747425809,5.75706756310284,6.03826467414889,1.83843757322004,4.40463523997555,2.42605942361857,2.91852413186863,4.08847491963601,3.11057988248193,4.68822033501084,1.67509799400829,4.50210088025344,3.81995619442025,14.4368006882097,11.10499110233,6.33758115806022,0.757261933331841,1.88928900266964,0,0,0,0,1.29955283489534,0,2.66844398250329,0,0,0,84.0835216066783,0,0,0,0,0,0,0.5709193985953,0,1.33597925158342,7.11289839741157,8.8294988710521,5.30415643688935,2.71300752994721,5.05631440683531,0.251333182659351,1.23597483867187,0.289198713839823,3.5384422077995,87.354098971601,36.6596920644253,71.7615374640129,0,0.292780797011547,0.41889341362691,0,0,0,0,7.18995069143149,2.74500361691176,3.8952849154988,5.04090528557602,4.09144731728529,5.194701113989,5.02947915510049,21.5899451362671,36.078021476927,1.26361379216837,1.89397670297827,19.2578255584801,10.8053989083732,24.3083875237221,32.4015358346787,27.2145996605311,24.3416068541215,18.8340466365055,12.6764651662118,14.0119195406347,35.1737309112144,44.5156344134791,46.2502995422183,65.0630563187899,71.043441970522,71.8179656063723,10.3497818745616,0,0,0,8.07790512888457,8.44293815931946,7.02242039697958,10.4167683657493,4.9191057936851,7.55908853148153,4.18561100550734,5.36546802799238,4.2035523252181,3.78487654801005,1.64167464079095,0.810688095458557,0.146199987425332,0.878200461164203,0.671032093801859,3.78521907415429,8.02655976558419,0,0,16.2099070406778,18.8111704206955,12.371276286921,5.44545516483025,3.55804870151792,3.42406127002606,0,2.14108641141214,1.25667604400135,1.98956472041151,0.974820435595601,0,0,0.199141273254367,7.01771233526402,11.7675967988021,13.5249282807697,7.33144780243131,6.0125271021964,4.62896411276103,3.35153646758564,0.147610147979602,0,0,0,3.83743743147016,2.94838492669805,2.69834534861824,3.04290182082754,5.54707467430559,4.58326533206556,3.45235364940973,2.43202840162553,0.823684239564244,4.31304619582064,1.11642284300551,0.624075346229121,0.252578877947112,0,0,0,20.6545638829828,17.6002174557388,13.0703716046895,9.85699042811709,4.52266895092903,2.85652369063216,2.73187107000918,1.26108115284953,1.32878813789265,1.11618338060241,0.983179888294428,0.863424909329478,0.144649058581512,0,0,0.983528546038072,5.51873492609465,5.61927064957272,7.2671245687166,2.62295912602681,12.6235463602186,13.8823616543153,14.8366722832723,18.9572590004863,16.7278158566786,11.1399337041197,15.286132662597,13.7635638569464,16.6585839009448,13.8350722281283,4.17717711348349,8.65834519770439,10.5058706163681,11.4020871547503,2.8044920905331,0,8.49732226542435,6.04647113929502,5.28094223316515,4.72483028609236,5.22639751504677,4.39328098385976,3.27180356529755,2.13898427030833,0.316036757935816,0,1.03135543248187,4.42571487479924,32.9511802077298,24.7075086025061,27.863814554107,44.6897388778529,38.5276646020472,30.9352158731987,21.312546438022,2.11204537257339,0.42366414172764,0.220528398054962,1.6488625294148,4.84393280087717,9.89131968821756,10.7435109602823,5.41664969158702,0.291480836629851,6.67531087237835,0,12.5895989457566,6.2966139305702,0.376736914009382,0,0.228778173206523,0,0,0,0,24.0415355121663,19.1120299099238,16.0927957824484,15.6816222010852,13.538478952263,8.09186078308924,4.87655388779482,1.04702376793612,0.259229946583586,1.24267862617385,1.12738587736838,9.71857549285862,7.94200754194069,11.2781689239548,12.5285028773399,10.1373675294467,11.0315804327009,9.11430693907651,3.14578033277133,1.20792060413003,1.44015003128933,0,5.47358081283443,4.82741498674688,0.77952493786677,2.68540043501222,0.39736270956253,0.360586348559907,0.295379054349154,0.100966449948148,0.228620419965,0.403304740547362,0.0974578807397524,0,0,0.453460767230423,2.88581739386284,0,0.167884616364078,2.70465431645067,16.7037403151552,1.28206136987086,2.78678892802786,0,3.95326289831947,2.30162618253588,5.72895513439397,3.26521046453006,2.05524755931193,3.0215755895588,2.02506750069542,3.60256962579376,3.17199686288943,2.07104124700728,7.9916257639816,21.5473431636557,25.7807744688743,33.062513521288,16.3498266849826,15.2590112013512,20.224452229947,23.0759264107562,21.1806678330598,20.7211713646314,25.8548885888045,25.0873034043481,21.0693391807235,20.7441493791776,20.1024141344646,19.528041342606,19.1209137809012,18.1334667235883,25.1372399490017,22.963031540966,21.2578936478958,21.6520483514392,23.1283104248901,21.6566160782169,23.903782625494,22.8459441307527,24.6952763378243,22.0978557607788,17.2471224584244,29.1793981262024,21.3543032623513,21.0799592283706,28.6461730218783,25.5645787956844,32.2154040338506,25.9803001055464,24.7967504952133,22.346589621023,68.2899345485771,61.1038230961058,47.5329063021864
|phase1_expression=45.1619748835519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.3091899863881,4.56196190487815,6.79122982998222,3.12956537739216,17.6600376668162,8.12838876117546,18.6652703111312,10.0790223570261,14.3752564364972,0,0,0,87.7254676882579,73.3525606243217,68.0687161806224,6.27181028664753,5.81890077199236,3.80298842103708,3.72728985276045,5.33576877666684,0,0,0,6.5912024314049,13.831858991576,8.39885859698669,7.2903206699113,6.73039876324422,5.71301968807607,7.95126747425809,5.75706756310284,6.03826467414889,1.83843757322004,4.40463523997555,2.42605942361857,2.91852413186863,4.08847491963601,3.11057988248193,4.68822033501084,1.67509799400829,4.50210088025344,3.81995619442025,14.4368006882097,11.10499110233,6.33758115806022,0.757261933331841,1.88928900266964,0,0,0,0,1.29955283489534,0,2.66844398250329,0,0,0,84.0835216066783,0,0,0,0,0,0,0.5709193985953,0,1.33597925158342,7.11289839741157,8.8294988710521,5.30415643688935,2.71300752994721,5.05631440683531,0.251333182659351,1.23597483867187,0.289198713839823,3.5384422077995,87.354098971601,36.6596920644253,71.7615374640129,0,0.292780797011547,0.41889341362691,0,0,0,0,7.18995069143149,2.74500361691176,3.8952849154988,5.04090528557602,4.09144731728529,5.194701113989,5.02947915510049,21.5899451362671,36.078021476927,1.26361379216837,1.89397670297827,19.2578255584801,10.8053989083732,24.3083875237221,32.4015358346787,27.2145996605311,24.3416068541215,18.8340466365055,12.6764651662118,14.0119195406347,35.1737309112144,44.5156344134791,46.2502995422183,65.0630563187899,71.043441970522,71.8179656063723,10.3497818745616,0,0,0,8.07790512888457,8.44293815931946,7.02242039697958,10.4167683657493,4.9191057936851,7.55908853148153,4.18561100550734,5.36546802799238,4.2035523252181,3.78487654801005,1.64167464079095,0.810688095458557,0.146199987425332,0.878200461164203,0.671032093801859,3.78521907415429,8.02655976558419,0,0,16.2099070406778,18.8111704206955,12.371276286921,5.44545516483025,3.55804870151792,3.42406127002606,0,2.14108641141214,1.25667604400135,1.98956472041151,0.974820435595601,0,0,0.199141273254367,7.01771233526402,11.7675967988021,13.5249282807697,7.33144780243131,6.0125271021964,4.62896411276103,3.35153646758564,0.147610147979602,0,0,0,3.83743743147016,2.94838492669805,2.69834534861824,3.04290182082754,5.54707467430559,4.58326533206556,3.45235364940973,2.43202840162553,0.823684239564244,4.31304619582064,1.11642284300551,0.624075346229121,0.252578877947112,0,0,0,20.6545638829828,17.6002174557388,13.0703716046895,9.85699042811709,4.52266895092903,2.85652369063216,2.73187107000918,1.26108115284953,1.32878813789265,1.11618338060241,0.983179888294428,0.863424909329478,0.144649058581512,0,0,0.983528546038072,5.51873492609465,5.61927064957272,7.2671245687166,2.62295912602681,12.6235463602186,13.8823616543153,14.8366722832723,18.9572590004863,16.7278158566786,11.1399337041197,15.286132662597,13.7635638569464,16.6585839009448,13.8350722281283,4.17717711348349,8.65834519770439,10.5058706163681,11.4020871547503,2.8044920905331,0,8.49732226542435,6.04647113929502,5.28094223316515,4.72483028609236,5.22639751504677,4.39328098385976,3.27180356529755,2.13898427030833,0.316036757935816,0,1.03135543248187,4.42571487479924,32.9511802077298,24.7075086025061,27.863814554107,44.6897388778529,38.5276646020472,30.9352158731987,21.312546438022,2.11204537257339,0.42366414172764,0.220528398054962,1.6488625294148,4.84393280087717,9.89131968821756,10.7435109602823,5.41664969158702,0.291480836629851,6.67531087237835,0,12.5895989457566,6.2966139305702,0.376736914009382,0,0.228778173206523,0,0,0,0,24.0415355121663,19.1120299099238,16.0927957824484,15.6816222010852,13.538478952263,8.09186078308924,4.87655388779482,1.04702376793612,0.259229946583586,1.24267862617385,1.12738587736838,9.71857549285862,7.94200754194069,11.2781689239548,12.5285028773399,10.1373675294467,11.0315804327009,9.11430693907651,3.14578033277133,1.20792060413003,1.44015003128933,0,5.47358081283443,4.82741498674688,0.77952493786677,2.68540043501222,0.39736270956253,0.360586348559907,0.295379054349154,0.100966449948148,0.228620419965,0.403304740547362,0.0974578807397524,0,0,0.453460767230423,2.88581739386284,0,0.167884616364078,2.70465431645067,16.7037403151552,1.28206136987086,2.78678892802786,0,3.95326289831947,2.30162618253588,5.72895513439397,3.26521046453006,2.05524755931193,3.0215755895588,2.02506750069542,3.60256962579376,3.17199686288943,2.07104124700728,7.9916257639816,21.5473431636557,25.7807744688743,33.062513521288,16.3498266849826,15.2590112013512,20.224452229947,23.0759264107562,21.1806678330598,20.7211713646314,25.8548885888045,25.0873034043481,21.0693391807235,20.7441493791776,20.1024141344646,19.528041342606,19.1209137809012,18.1334667235883,25.1372399490017,22.963031540966,21.2578936478958,21.6520483514392,23.1283104248901,21.6566160782169,23.903782625494,22.8459441307527,24.6952763378243,22.0978557607788,17.2471224584244,29.1793981262024,21.3543032623513,21.0799592283706,28.6461730218783,25.5645787956844,32.2154040338506,25.9803001055464,24.7967504952133,22.346589621023,68.2899345485771,61.1038230961058,47.5329063021864
|short_description=p2@Col11a1
}}
}}

Latest revision as of 08:41, 27 September 2015

Short description:p2@Col11a1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Col11a1_5end
Coexpression cluster:MCL_coexpression_mm9:1194
Association with transcript: 0bp_to_ENSMUST00000029583, ENSMUST00000029585, ENSMUST00000029586, ENSMUST00000092155, ENSMUST00000123619, NM_007729, uc008rbj.1, uc008rbk.1_5end
EntrezGene:Col11a1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Col11a1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G745.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.56
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.79
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C217.66
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.13
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C318.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C187.73
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E173.35
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C568.07
Mouse Granule cells, donor1.CNhs12131.11713-123C36.27
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C86.59
Mouse Microglia, donor2.CNhs12634.11736-123E813.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.40
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.29
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.95
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.04
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.44
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.10
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.34
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F91.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G684.08
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C57.11
adrenal gland, embryo E16.CNhs11004.1254-43D68.83
adrenal gland, embryo E17.CNhs11043.1263-45I15.30
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C15.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F587.35
bone (os femoris), neonate N16.CNhs11225.1525-43A636.66
bone (os femoris), neonate N20.CNhs11195.1350-25C371.76
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.19
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F13.90
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F25.19
diencephalon, neonate N30.CNhs11201.1388-42B25.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B121.59
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A236.08
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C619.26
eyeball, embryo E14.CNhs10521.399-16E210.81
eyeball, embryo E15.CNhs10593.426-16C924.31
eyeball, embryo E17.CNhs11023.1261-18D432.40
eyeball, neonate N00.CNhs11207.633-15C627.21
eyeball, neonate N01.CNhs11140.1532-43E724.34
eyeball, neonate N02.CNhs11205.1551-44G818.83
eyeball, neonate N16.CNhs11188.777-19A212.68
forelimb, embryo E11.CNhs10596.335-25E214.01
forelimb, embryo E12.CNhs10600.359-14H235.17
forelimb, embryo E13.CNhs10589.384-1E244.52
forelimb, embryo E14.CNhs10577.413-26A846.25
forelimb, embryo E15.CNhs11007.437-20E765.06
forelimb, embryo E17.CNhs10598.1517-43C471.04
forelimb, embryo E18.CNhs11008.1520-43B571.82
gonad, embryo E13.CNhs11044.1564-45I610.35
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E98.08
heart, embryo E12.CNhs11015.353-12F58.44
heart, embryo E13.CNhs11013.376-3I97.02
heart, embryo E14.CNhs10597.403-26D410.42
heart, embryo E15.CNhs11017.431-16C84.92
heart, embryo E16.CNhs11021.457-17C67.56
heart, embryo E17.CNhs11025.479-18E54.19
heart, embryo E18.CNhs11030.1283-20G35.37
heart, neonate N00.CNhs11213.639-21E34.20
heart, neonate N03.CNhs11221.1349-25I23.78
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G18.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I516.21
intestine, embryo E13.CNhs11010.381-16D518.81
intestine, embryo E15.CNhs10602.976-16D812.37
intestine, embryo E16.CNhs10585.463-22H45.45
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I97.02
kidney, embryo E15.CNhs10997.434-16F811.77
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I27.33
kidney, embryo E18.CNhs11001.1288-20C76.01
kidney, neonate N00.CNhs11214.646-21G74.63
kidney, neonate N10.CNhs11206.758-6D53.35
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F83.84
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F55.55
liver, embryo E17.CNhs10510.481-18A34.58
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F42.43
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G220.65
lung, embryo E14.CNhs10604.404-26F817.60
lung, embryo E15.CNhs11020.432-17C513.07
lung, embryo E16.CNhs10998.458-17B69.86
lung, embryo E17.CNhs10605.480-44A64.52
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H25.52
medulla oblongata, adult.CNhs10477.17-12C25.62
medulla oblongata, neonate N30.CNhs11200.1396-42A37.27
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.62
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E113.88
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.84
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.96
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.73
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.14
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.29
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.76
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.66
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.84
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I78.66
ovary, embryo E18.CNhs11040.505-44H710.51
ovary, neonate N00.CNhs11217.1299-22I411.40
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F48.50
pancreas, embryo E15.CNhs11042.1556-45F26.05
pancreas, embryo E16.CNhs11003.460-26E55.28
pancreas, embryo E17.CNhs10599.1558-45G34.72
pancreas, embryo E18.CNhs10580.1535-43I75.23
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E632.95
pituitary gland, embryo E13.CNhs11009.370-44C724.71
pituitary gland, embryo E14.CNhs11037.398-44A527.86
pituitary gland, embryo E15.CNhs10592.427-16B944.69
pituitary gland, embryo E16.CNhs11036.449-43F638.53
pituitary gland, embryo E17.CNhs11039.1265-44F530.94
pituitary gland, neonate N00.CNhs11190.1308-22E921.31
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G44.84
skin, neonate N03.CNhs11215.662-22H39.89
skin, neonate N06.CNhs11097.693-20I510.74
skin, neonate N10.CNhs11108.762-6C45.42
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C96.68
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C112.59
spleen, embryo E18.CNhs11011.1271-21F26.30
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E324.04
stomach, embryo E15.CNhs10603.1252-16G819.11
stomach, embryo E16.CNhs11022.459-17D416.09
stomach, embryo E17.CNhs11006.1035-18D515.68
stomach, embryo E18.CNhs10999.1286-20C613.54
stomach, neonate N03.CNhs11193.1340-24B88.09
stomach, neonate N07.CNhs11210.718-18A94.88
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F59.72
testis, embryo E15.CNhs11034.443-27C57.94
testis, embryo E16.CNhs11033.470-26G511.28
testis, embryo E17.CNhs11029.486-18I512.53
testis, embryo E18.CNhs11027.503-18G510.14
testis, neonate N00.CNhs11189.1300-22B711.03
testis, neonate N07.CNhs11222.726-26I49.11
testis, neonate N10.CNhs11204.763-44D93.15
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I45.47
thymus, embryo E15.CNhs11005.430-45I24.83
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F516.70
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I87.99
whole body, embryo E12.CNhs10587.857-27C921.55
whole body, embryo E13.CNhs10512.372-23H225.78
whole body, embryo E14.5.CNhs10578.420-27D233.06
whole body, embryo E14.CNhs10519.395-14B116.35
whole body, embryo E16.CNhs10514.453-14F215.26
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G523.08
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G521.18
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.72
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G525.85
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G525.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G521.07
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.74
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G520.10
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G519.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G518.13
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G525.14
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.96
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G521.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G521.65
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G523.13
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G521.66
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G523.90
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G522.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G524.70
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G522.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G517.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G529.18
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G521.35
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G521.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G528.65
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G525.56
whole body, embryo E17.5.CNhs10513.490-9F932.22
whole body, embryo E17.CNhs10517.475-3I525.98
whole body, embryo E18.CNhs10516.493-3B324.80
whole body, neonate N00.CNhs10525.657-19C222.35
whole body, neonate N01.CNhs10576.659-23C668.29
whole body, neonate N06.CNhs10515.692-21D161.10
whole body, neonate N10.CNhs10518.761-6B447.53





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
appendage3.72e-0712
paired limb/fin3.72e-0712
limb3.72e-0712
paired limb/fin bud3.72e-0712
limb bud3.72e-0712
limb/fin field3.72e-0712
limb field3.72e-0712
ectoderm-derived structure4.02e-0795
ectoderm4.02e-0795
presumptive ectoderm4.02e-0795
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:113733450..113733489,%2B&oldid=4301050"