FFCP PHASE1:Mm9::chr3:116414784..116414800,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:116414784..116414800,-
|short_description=p5@Slc35a3
|description=CAGE_peak_5_at_Slc35a3_5end
|association_with_transcript=-24bp_to_ENSMUST00000153108_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=229782 | |EntrezGene=229782 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1324 | |||
|TSSclassifier=NA | |||
|UniProt=D3YXZ7 | |UniProt=D3YXZ7 | ||
|association_with_transcript=-24bp_to_ENSMUST00000153108_5end | |||
|cluster_id=chr3:116414784..116414800,- | |||
|description=CAGE_peak_5_at_Slc35a3_5end | |||
|id=chr3:116414784..116414800,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.88e-13,9;CL:0002251,6.88e-13,9;CL:0000682,1.17e-08,3;CL:0000066,2.26e-08,25;CL:0002250,6.77e-08,3;CL:0002076,2.55e-07,15;CL:0000239,4.81e-07,6;CL:0000677,4.81e-07,6;CL:0000584,4.81e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.43e-14!59;UBERON:0000160!1.25e-09!43;UBERON:0000344!1.25e-09!15;UBERON:0001242!3.54e-08!13;UBERON:0000060!3.54e-08!13;UBERON:0001262!3.54e-08!13;UBERON:0004786!3.54e-08!13;UBERON:0004923!1.62e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.70e-35,47;UBERON:0000344,2.53e-25,15;UBERON:0000160,5.35e-24,31;UBERON:0001242,8.52e-21,13;UBERON:0001262,8.52e-21,13;UBERON:0004786,8.52e-21,13;UBERON:0004923,9.65e-15,24;UBERON:0001007,2.51e-14,116;UBERON:0001555,2.51e-14,116;UBERON:0007026,2.51e-14,116;UBERON:0004119,5.70e-14,118;UBERON:0000925,5.70e-14,118;UBERON:0006595,5.70e-14,118;UBERON:0003350,6.88e-13,9;UBERON:0004808,6.88e-13,9;UBERON:0001277,6.88e-13,9;UBERON:0004921,3.37e-12,114;UBERON:0000945,1.69e-11,16;UBERON:0010039,1.69e-11,16;UBERON:0000485,2.35e-10,11;UBERON:0000331,7.56e-08,3;UBERON:0002116,7.56e-08,3;UBERON:0001204,7.56e-08,3;UBERON:0001168,7.56e-08,3 | |||
|phase1_expression=0.640595388419176,1.74487703819681,1.81999695755814,0,0.500895729946347,7.21880869221126,6.30754129607919,0,0.140788722151667,0,0,0,0,0,0.666219523631325,0,0,0,0,0,0.340173160604279,0,0,4.63978026100879,3.89995777814189,5.16808767703518,3.87685796543167,6.24866574789078,1.52018735565099,1.51218077855958,8.86922042621219,0,0,0,3.75507105676657,2.1610503896604,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0.253359865475099,0,0.79928715803342,0.517875767294343,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0.289198713839823,0,0.161766849947409,0,0.484875253135222,5.59175283654366,0,0,1.53274233125155,0,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0.162241263067758,0.101839363850316,0.373220911830279,0.252722758433675,0.420883711772948,0,0,0,0.30140963567143,0.204109497453984,0.12811372028485,0,0.776110112217047,0,0.756424320671277,0.351902248327898,0.43839146485515,1.66828349535359,0,0.61734640922383,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.243206428637567,0.292399974850665,0.439100230582101,0,0,0,1.32167513193519,1.05780226665418,0,0,0.257734922644187,0.403367049246685,0.22237804384487,1.52180500890047,0.949058123089023,0.329397909448022,1.75934646160189,1.79060824837036,0.779856348476481,0,4.53889904736858,3.58454291857861,0,0,1.1270773567308,0,0.581857461502877,0,0.0632365371242573,0,0,0,0,0.667380422864376,0,0.224862112384854,0.608580364165509,0.482354319504834,0.50925170356284,0,0.162135226775035,0,0,0.372140947668503,0,0.252578877947112,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0.327726629431476,0,0.289298117163023,0,0,0,0.827810238914197,0.160550589987792,0.117211686592203,0,0,0,0.390438744296638,0,0.477937595905104,0.222798674082394,0,0.404810701674894,0,0.790575555893047,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0.516856586336442,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0.23467170806371,0.21183207086382,7.49796553386871,0,0,0.180938774784468,0,0.328281799490123,0.291480836629851,0,0.341741761595705,0,0,0.188368457004691,0.136694227721025,0.228778173206523,0.169978429993855,0,0.138199973804424,6.68269432610579,0,1.01659733563424,3.24016022465404,5.22720740036172,5.45906409365444,2.42755823492677,4.46328660916814,6.02038666563268,3.75883422546199,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0.335769232728157,0,0.187682475451182,0.549454872801795,0,2.00628841614145,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.551530525350042,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.468207537349412,0.192075457214608,0.17230640686684,0.476293691283074,0.463537303779422,0.77163688185482,0,0.588795680537589,0,0.532427418478012,0,0,0.564656282491984,0.0846146078916765,0.548783918618318,0,0.135804113845862,0,0.237270036248348,0.985044823755635,0.409231043169689,0.154936841185966,0.578719832943424,0.499621155875892,0.467863216890817,0.214871054048298,0.191288332068843,0.661774257358546,0.231867835620421 | |phase1_expression=0.640595388419176,1.74487703819681,1.81999695755814,0,0.500895729946347,7.21880869221126,6.30754129607919,0,0.140788722151667,0,0,0,0,0,0.666219523631325,0,0,0,0,0,0.340173160604279,0,0,4.63978026100879,3.89995777814189,5.16808767703518,3.87685796543167,6.24866574789078,1.52018735565099,1.51218077855958,8.86922042621219,0,0,0,3.75507105676657,2.1610503896604,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0.253359865475099,0,0.79928715803342,0.517875767294343,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0.289198713839823,0,0.161766849947409,0,0.484875253135222,5.59175283654366,0,0,1.53274233125155,0,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0.162241263067758,0.101839363850316,0.373220911830279,0.252722758433675,0.420883711772948,0,0,0,0.30140963567143,0.204109497453984,0.12811372028485,0,0.776110112217047,0,0.756424320671277,0.351902248327898,0.43839146485515,1.66828349535359,0,0.61734640922383,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.243206428637567,0.292399974850665,0.439100230582101,0,0,0,1.32167513193519,1.05780226665418,0,0,0.257734922644187,0.403367049246685,0.22237804384487,1.52180500890047,0.949058123089023,0.329397909448022,1.75934646160189,1.79060824837036,0.779856348476481,0,4.53889904736858,3.58454291857861,0,0,1.1270773567308,0,0.581857461502877,0,0.0632365371242573,0,0,0,0,0.667380422864376,0,0.224862112384854,0.608580364165509,0.482354319504834,0.50925170356284,0,0.162135226775035,0,0,0.372140947668503,0,0.252578877947112,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0.327726629431476,0,0.289298117163023,0,0,0,0.827810238914197,0.160550589987792,0.117211686592203,0,0,0,0.390438744296638,0,0.477937595905104,0.222798674082394,0,0.404810701674894,0,0.790575555893047,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0.516856586336442,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0.23467170806371,0.21183207086382,7.49796553386871,0,0,0.180938774784468,0,0.328281799490123,0.291480836629851,0,0.341741761595705,0,0,0.188368457004691,0.136694227721025,0.228778173206523,0.169978429993855,0,0.138199973804424,6.68269432610579,0,1.01659733563424,3.24016022465404,5.22720740036172,5.45906409365444,2.42755823492677,4.46328660916814,6.02038666563268,3.75883422546199,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0.335769232728157,0,0.187682475451182,0.549454872801795,0,2.00628841614145,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.551530525350042,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.468207537349412,0.192075457214608,0.17230640686684,0.476293691283074,0.463537303779422,0.77163688185482,0,0.588795680537589,0,0.532427418478012,0,0,0.564656282491984,0.0846146078916765,0.548783918618318,0,0.135804113845862,0,0.237270036248348,0.985044823755635,0.409231043169689,0.154936841185966,0.578719832943424,0.499621155875892,0.467863216890817,0.214871054048298,0.191288332068843,0.661774257358546,0.231867835620421 | ||
|short_description=p5@Slc35a3 | |||
}} | }} |
Latest revision as of 12:08, 1 October 2015
Short description: | p5@Slc35a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Slc35a3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1324 |
Association with transcript: | -24bp_to_ENSMUST00000153108_5end |
EntrezGene: | Slc35a3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.88e-13 | 9 |
epithelial cell of alimentary canal | 6.88e-13 | 9 |
M cell of gut | 1.17e-08 | 3 |
epithelial cell | 2.26e-08 | 25 |
intestinal crypt stem cell | 6.77e-08 | 3 |
endo-epithelial cell | 2.55e-07 | 15 |
brush border epithelial cell | 4.81e-07 | 6 |
gut absorptive cell | 4.81e-07 | 6 |
enterocyte | 4.81e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.70e-35 | 47 |
mucosa | 2.53e-25 | 15 |
intestine | 5.35e-24 | 31 |
intestinal mucosa | 8.52e-21 | 13 |
wall of intestine | 8.52e-21 | 13 |
gastrointestinal system mucosa | 8.52e-21 | 13 |
organ component layer | 9.65e-15 | 24 |
digestive system | 2.51e-14 | 116 |
digestive tract | 2.51e-14 | 116 |
primitive gut | 2.51e-14 | 116 |
endoderm-derived structure | 5.70e-14 | 118 |
endoderm | 5.70e-14 | 118 |
presumptive endoderm | 5.70e-14 | 118 |
epithelium of mucosa | 6.88e-13 | 9 |
gastrointestinal system epithelium | 6.88e-13 | 9 |
intestinal epithelium | 6.88e-13 | 9 |
subdivision of digestive tract | 3.37e-12 | 114 |
stomach | 1.69e-11 | 16 |
food storage organ | 1.69e-11 | 16 |
simple columnar epithelium | 2.35e-10 | 11 |
ileal mucosa | 7.56e-08 | 3 |
ileum | 7.56e-08 | 3 |
mucosa of small intestine | 7.56e-08 | 3 |
wall of small intestine | 7.56e-08 | 3 |