FFCP PHASE2:Hg19::chr7:47579188..47579231,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:64759 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:21616 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=64759 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=21616 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=E7ERH3,Q68CZ2,F5GXX8 | ||
|association_with_transcript=0bp_to_ENST00000355730,ENST00000398879,ENST00000442536,ENST00000458317,ENST00000545849,uc003tnv.2,uc010kyo.1_5end | |association_with_transcript=0bp_to_ENST00000355730,ENST00000398879,ENST00000442536,ENST00000458317,ENST00000545849,uc003tnv.2,uc010kyo.1_5end | ||
|cluster_id=chr7:47579188..47579231,- | |cluster_id=chr7:47579188..47579231,- |
Latest revision as of 21:14, 18 September 2015
Short description: | p13@TNS3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TNS3_5end |
Coexpression cluster: | C356_renal_Smooth_Chondrocyte_thyroid_serous_Small_mesenchymal |
Association with transcript: | 0bp_to_ENST00000355730, ENST00000398879, ENST00000442536, ENST00000458317, ENST00000545849, uc003tnv.2, uc010kyo.1_5end |
EntrezGene: | TNS3 |
HGNC: | 21616 |
UniProt: | E7ERH3Q68CZ2F5GXX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p13@TNS3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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kidney tubule cell | 7.01e-42 | 10 |
nephron tubule epithelial cell | 7.01e-42 | 10 |
kidney cell | 1.18e-36 | 17 |
kidney epithelial cell | 1.18e-36 | 17 |
epithelial cell of nephron | 1.93e-27 | 15 |
kidney cortical cell | 1.53e-15 | 12 |
renal cortical epithelial cell | 1.53e-15 | 12 |
mesangial cell | 5.84e-12 | 2 |
kidney interstitial cell | 5.84e-12 | 2 |
juxtaglomerular complex cell | 5.84e-12 | 2 |
Showing 1 to 10 of 16 entries
Ontology term | p-value | n |
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nephron tubule epithelium | 7.01e-42 | 10 |
kidney | 5.17e-33 | 26 |
kidney mesenchyme | 5.17e-33 | 26 |
upper urinary tract | 5.17e-33 | 26 |
kidney rudiment | 5.17e-33 | 26 |
kidney field | 5.17e-33 | 26 |
abdomen element | 5.78e-29 | 54 |
abdominal segment element | 5.78e-29 | 54 |
nephron epithelium | 1.93e-27 | 15 |
renal tubule | 1.93e-27 | 15 |
Showing 1 to 10 of 44 entries